Test Result : VariantDatasetSuite

0 failures (±0)
41 tests (±0)
Took 48 sec.

All Tests

Test nameDurationStatus
convert back to variant contexts0.13 secPassed
filter RDD bound indel variants1.1 secPassed
filter RDD bound multiple nucleotide variants1 secPassed
filter RDD bound single nucleotide variants0.13 secPassed
filter RDD bound variants by quality0.14 secPassed
filter RDD bound variants by read depth1.2 secPassed
filter RDD bound variants by reference read depth0.13 secPassed
filter RDD bound variants to filters passed0.43 secPassed
filter RDD bound variants to indel variants1.1 secPassed
filter RDD bound variants to multiple nucleotide variants0.14 secPassed
filter RDD bound variants to single nucleotide variants0.14 secPassed
filter dataset bound indel variants0.84 secPassed
filter dataset bound multiple nucleotide variants0.58 secPassed
filter dataset bound single nucleotide variants1.3 secPassed
filter dataset bound variants by quality1.4 secPassed
filter dataset bound variants by read depth0.62 secPassed
filter dataset bound variants by reference read depth2 secPassed
filter dataset bound variants to filters passed0.87 secPassed
filter dataset bound variants to indel variants0.61 secPassed
filter dataset bound variants to multiple nucleotide variants1.1 secPassed
filter dataset bound variants to single nucleotide variants2.2 secPassed
load parquet to sql, save, re-read from avro4.1 secPassed
round trip to parquet0.5 secPassed
save and reload from partitioned parquet1.7 secPassed
transform dataset via java API2.5 secPassed
transform variants to coverage genomic dataset2.6 secPassed
transform variants to feature genomic dataset1.6 secPassed
transform variants to fragment genomic dataset2 secPassed
transform variants to genotype genomic dataset3.4 secPassed
transform variants to read genomic dataset2.8 secPassed
transform variants to slice genomic dataset0.9 secPassed
transform variants to variant context genomic dataset0.12 secPassed
union two variant genomic datasets together0.27 secPassed
use broadcast join to pull down variants mapped to targets0.25 secPassed
use full outer shuffle join to pull down variants mapped to targets1.7 secPassed
use left outer shuffle join to pull down variants mapped to targets0.55 secPassed
use right outer broadcast join to pull down variants mapped to targets0.24 secPassed
use right outer shuffle join to pull down variants mapped to targets0.56 secPassed
use right outer shuffle join with group by to pull down variants mapped to targets2.5 secPassed
use shuffle join to pull down variants mapped to targets0.79 secPassed
use shuffle join with group by to pull down variants mapped to targets1.5 secPassed