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/tmp/adamTestMvn8qxvEzU/TempSuite8435631855449624470.adam/._processingSteps.avro.crc
/tmp/adamTestMvn8qxvEzU/TempSuite8435631855449624470.adam/._references.avro.crc
/tmp/adamTestMvn8qxvEzU/TempSuite8435631855449624470.adam/.part-00000-123a2d49-f33c-47f4-9a96-c5895cf92abf-c000.snappy.parquet.crc
/tmp/adamTestMvn8qxvEzU/TempSuite8435631855449624470.adam/_references.avro
/tmp/adamTestMvn8qxvEzU/unordered.sam3159687899377069975.sam
/tmp/adamTestMvn8qxvEzU/FeatureDatasetFunctionsSuite5580025480081364574
/tmp/adamTestMvn8qxvEzU/1557792265532-0
/tmp/adamTestMvn8qxvEzU/1557792265532-0/.test.gvcf.vcf.crc
/tmp/adamTestMvn8qxvEzU/1557792265532-0/test.gvcf.vcf
/tmp/adamTestMvn8qxvEzU/TempSuite2435458593768179812
/tmp/adamTestMvn8qxvEzU/TempSuite8406127088099765091.bed
/tmp/adamTestMvn8qxvEzU/TempSuite8406127088099765091.bed/part-00000
/tmp/adamTestMvn8qxvEzU/TempSuite8406127088099765091.bed/_SUCCESS
/tmp/adamTestMvn8qxvEzU/TempSuite8406127088099765091.bed/.part-00000.crc
/tmp/adamTestMvn8qxvEzU/TempSuite8406127088099765091.bed/._SUCCESS.crc
/tmp/adamTestMvn8qxvEzU/TempSuite750054348932102790.bed
/tmp/adamTestMvn8qxvEzU/TempSuite750054348932102790.bed/part-00000
/tmp/adamTestMvn8qxvEzU/TempSuite750054348932102790.bed/_SUCCESS
/tmp/adamTestMvn8qxvEzU/TempSuite750054348932102790.bed/.part-00000.crc
/tmp/adamTestMvn8qxvEzU/TempSuite750054348932102790.bed/._SUCCESS.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/._common_metadata.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/_common_metadata
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/part-r-00003.gz.parquet
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/.part-r-00003.gz.parquet.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/._samples.avro.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/._metadata.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/part-r-00000.gz.parquet
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/.part-r-00002.gz.parquet.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/_samples.avro
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/_SUCCESS
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/._SUCCESS.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/part-r-00002.gz.parquet
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/part-r-00001.gz.parquet
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/.part-r-00001.gz.parquet.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/._references.avro.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/_metadata
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/.part-r-00000.gz.parquet.crc
/tmp/adamTestMvn8qxvEzU/TempSuite7573153306883115860.adam/_references.avro
rm -rf ${ADAM_MVN_TMP_DIR}
+ rm -rf /tmp/adamTestMvn8qxvEzU

find . -name pom.xml \
    -exec sed -i.bak \
    -e "s:sun.io.serialization.extendedDebugInfo=true -Djava.io.tmpdir=${ADAM_MVN_TMP_DIR}:sun.io.serialization.extendedDebugInfo=true:g" \
    {} \;
+ find . -name pom.xml -exec sed -i.bak -e 's:sun.io.serialization.extendedDebugInfo=true -Djava.io.tmpdir=/tmp/adamTestMvn8qxvEzU:sun.io.serialization.extendedDebugInfo=true:g' '{}' ';'
find . -name "*.bak" -exec rm -f {} \;
+ find . -name '*.bak' -exec rm -f '{}' ';'

if test -n "$(git status --porcelain)"
then
    echo "Applying move_to_xyz script marred a pom.xml file."
    echo "Exiting..."
    exit 1
fi
git status --porcelain
++ git status --porcelain
+ test -n ' M adam-apis/pom.xml
 M adam-assembly/pom.xml
 M adam-cli/pom.xml
 M adam-codegen/pom.xml
 M adam-core/pom.xml
 M adam-distribution/pom.xml
 M adam-python/pom.xml
 M adam-r/pom.xml
 M adam-shade/pom.xml
 M pom.xml'
+ echo 'Applying move_to_xyz script marred a pom.xml file.'
Applying move_to_xyz script marred a pom.xml file.
+ echo Exiting...
Exiting...
+ exit 1
Build step 'Execute shell' marked build as failure
Recording test results
Publishing Scoverage XML and HTML report...
null
Setting commit status on GitHub for https://github.com/bigdatagenomics/adam/commit/0d6565b036217e99af3454b3fcb49a90c1ff6ee0
Finished: FAILURE