FailedConsole Output

Skipping 5,772 KB.. Full Log
rg/scalatra/scalatra-common_2.12/2.5.0/scalatra-common_2.12-2.5.0.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/scalatra/scalatra-common_2.12/2.5.0/scalatra-common_2.12-2.5.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/googlecode/juniversalchardet/juniversalchardet/1.0.3/juniversalchardet-1.0.3.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/com/googlecode/juniversalchardet/juniversalchardet/1.0.3/juniversalchardet-1.0.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/eu/medsea/mimeutil/mime-util/2.1.3/mime-util-2.1.3.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/eu/medsea/mimeutil/mime-util/2.1.3/mime-util-2.1.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scala-lang/modules/scala-parser-combinators_2.12/1.0.4/scala-parser-combinators_2.12-1.0.4.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/scala-lang/modules/scala-parser-combinators_2.12/1.0.4/scala-parser-combinators_2.12-1.0.4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scalatra/scalate/scalate-core_2.12/1.9.1/scalate-core_2.12-1.9.1.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/scalatra/scalate/scalate-core_2.12/1.9.1/scalate-core_2.12-1.9.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scala-lang/scala-compiler/2.12.8/scala-compiler-2.12.8.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/scala-lang/scala-compiler/2.12.8/scala-compiler-2.12.8.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scalatra/scalate/scalate-util_2.12/1.9.1/scalate-util_2.12-1.9.1.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/scalatra/scalate/scalate-util_2.12/1.9.1/scalate-util_2.12-1.9.1.jar
[INFO] Installing artifact /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-core/target/mango-core-spark3_2.12-0.0.6-SNAPSHOT.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/bdgenomics/mango/mango-core-spark3_2.12/0.0.6-SNAPSHOT/mango-core-spark3_2.12-0.0.6-SNAPSHOT.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/utils/utils-io-spark2_2.12/0.3.0/utils-io-spark2_2.12-0.3.0.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/bdgenomics/utils/utils-io-spark2_2.12/0.3.0/utils-io-spark2_2.12-0.3.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/3.0.0-beta-3/protobuf-java-3.0.0-beta-3.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/com/google/protobuf/protobuf-java/3.0.0-beta-3/protobuf-java-3.0.0-beta-3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/protobuf/protobuf-java-util/3.0.0-beta-3/protobuf-java-util-3.0.0-beta-3.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/com/google/protobuf/protobuf-java-util/3.0.0-beta-3/protobuf-java-util-3.0.0-beta-3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/ga4gh/ga4gh-schemas/0.6.0a10/ga4gh-schemas-0.6.0a10.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/ga4gh/ga4gh-schemas/0.6.0a10/ga4gh-schemas-0.6.0a10.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/convert/convert-ga4gh/0.9.0/convert-ga4gh-0.9.0.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/bdgenomics/convert/convert-ga4gh/0.9.0/convert-ga4gh-0.9.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/convert/convert-htsjdk/0.9.0/convert-htsjdk-0.9.0.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/bdgenomics/convert/convert-htsjdk/0.9.0/convert-htsjdk-0.9.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/inject/extensions/guice-assistedinject/4.2.2/guice-assistedinject-4.2.2.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/com/google/inject/extensions/guice-assistedinject/4.2.2/guice-assistedinject-4.2.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/convert/convert/0.9.0/convert-0.9.0.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/bdgenomics/convert/convert/0.9.0/convert-0.9.0.jar
[INFO] Installing artifact /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/mango-cli-spark3_2.12-0.0.6-SNAPSHOT.jar to /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-cli/target/appassembler/repo/org/bdgenomics/mango/mango-cli-spark3_2.12/0.0.6-SNAPSHOT/mango-cli-spark3_2.12-0.0.6-SNAPSHOT.jar
[INFO] 
[INFO] ----------< org.bdgenomics.mango:mango-assembly-spark3_2.12 >-----------
[INFO] Building Mango_2.12: Assembly 0.0.6-SNAPSHOT                       [3/5]
[INFO] --------------------------------[ jar ]---------------------------------
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-shade-plugin/3.2.0/maven-shade-plugin-3.2.0.pom
Progress (1): 4.1/9.3 kB
Progress (1): 8.2/9.3 kB
Progress (1): 9.3 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-shade-plugin/3.2.0/maven-shade-plugin-3.2.0.pom (9.3 kB at 848 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-shade-plugin/3.2.0/maven-shade-plugin-3.2.0.jar
Progress (1): 4.1/113 kB
Progress (1): 8.2/113 kB
Progress (1): 12/113 kB 
Progress (1): 16/113 kB
Progress (1): 20/113 kB
Progress (1): 25/113 kB
Progress (1): 29/113 kB
Progress (1): 33/113 kB
Progress (1): 37/113 kB
Progress (1): 41/113 kB
Progress (1): 45/113 kB
Progress (1): 49/113 kB
Progress (1): 53/113 kB
Progress (1): 57/113 kB
Progress (1): 61/113 kB
Progress (1): 66/113 kB
Progress (1): 70/113 kB
Progress (1): 74/113 kB
Progress (1): 78/113 kB
Progress (1): 82/113 kB
Progress (1): 86/113 kB
Progress (1): 90/113 kB
Progress (1): 94/113 kB
Progress (1): 98/113 kB
Progress (1): 102/113 kB
Progress (1): 106/113 kB
Progress (1): 111/113 kB
Progress (1): 113 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-shade-plugin/3.2.0/maven-shade-plugin-3.2.0.jar (113 kB at 5.7 MB/s)
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] --- git-commit-id-plugin:2.2.2:revision (default) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] --- templating-maven-plugin:1.0.0:filter-sources (filter-src) @ mango-assembly-spark3_2.12 ---
[INFO] Request to add '/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/main/java-templates' folder. Not added since it does not exist.
[INFO] 
[INFO] --- build-helper-maven-plugin:1.10:add-source (add-source) @ mango-assembly-spark3_2.12 ---
[INFO] Source directory: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/main/scala added.
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default) @ mango-assembly-spark3_2.12 ---
[INFO] Modified 0 of 1 .scala files
[INFO] 
[INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ mango-assembly-spark3_2.12 ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/main/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ mango-assembly-spark3_2.12 ---
[WARNING]  Expected all dependencies to require Scala version: 2.12.8
[WARNING]  net.liftweb:lift-json_2.12:3.3.0 requires scala version: 2.12.6
[WARNING] Multiple versions of scala libraries detected!
[INFO] Nothing to compile - all classes are up to date
[INFO] 
[INFO] --- maven-compiler-plugin:3.8.0:compile (default-compile) @ mango-assembly-spark3_2.12 ---
[INFO] Nothing to compile - all classes are up to date
[INFO] 
[INFO] --- build-helper-maven-plugin:1.10:add-test-source (add-test-source) @ mango-assembly-spark3_2.12 ---
[INFO] Test Source directory: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/test/scala added.
[INFO] 
[INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ mango-assembly-spark3_2.12 ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/test/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ mango-assembly-spark3_2.12 ---
[WARNING]  Expected all dependencies to require Scala version: 2.12.8
[WARNING]  net.liftweb:lift-json_2.12:3.3.0 requires scala version: 2.12.6
[WARNING] Multiple versions of scala libraries detected!
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-compiler-plugin:3.8.0:testCompile (default-testCompile) @ mango-assembly-spark3_2.12 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-surefire-plugin:3.0.0-M3:test (default-test) @ mango-assembly-spark3_2.12 ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-jar-plugin:3.1.2:jar (default-jar) @ mango-assembly-spark3_2.12 ---
[INFO] Building jar: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/target/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT.jar
[INFO] 
[INFO] --- maven-source-plugin:3.0.1:jar-no-fork (attach-sources) @ mango-assembly-spark3_2.12 ---
[INFO] Building jar: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/target/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-sources.jar
[INFO] 
[INFO] --- maven-javadoc-plugin:3.1.0:jar (attach-javadocs) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] >>> scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) > generate-sources @ mango-assembly-spark3_2.12 >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] --- git-commit-id-plugin:2.2.2:revision (default) @ mango-assembly-spark3_2.12 ---
[INFO] 
[INFO] --- templating-maven-plugin:1.0.0:filter-sources (filter-src) @ mango-assembly-spark3_2.12 ---
[INFO] Request to add '/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/main/java-templates' folder. Not added since it does not exist.
[INFO] 
[INFO] --- build-helper-maven-plugin:1.10:add-source (add-source) @ mango-assembly-spark3_2.12 ---
[INFO] Source directory: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/src/main/scala added.
[INFO] 
[INFO] <<< scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) < generate-sources @ mango-assembly-spark3_2.12 <<<
[INFO] 
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) @ mango-assembly-spark3_2.12 ---
[WARNING]  Expected all dependencies to require Scala version: 2.12.8
[WARNING]  net.liftweb:lift-json_2.12:3.3.0 requires scala version: 2.12.6
[WARNING] Multiple versions of scala libraries detected!
[WARNING]  Expected all dependencies to require Scala version: 2.12.8
[WARNING]  net.liftweb:lift-json_2.12:3.3.0 requires scala version: 2.12.6
[WARNING] Multiple versions of scala libraries detected!
model contains 6 documentable templates
[INFO] Building jar: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/target/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-javadoc.jar
[INFO] 
[INFO] --- maven-shade-plugin:3.2.0:shade (default) @ mango-assembly-spark3_2.12 ---
Downloading from central: https://repo.maven.apache.org/maven2/org/bdgenomics/adam/adam-shade-spark2_2.12/0.32.0/adam-shade-spark2_2.12-0.32.0.pom
Progress (1): 1.5 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/bdgenomics/adam/adam-shade-spark2_2.12/0.32.0/adam-shade-spark2_2.12-0.32.0.pom (1.5 kB at 124 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-shade-plugin/3.2.1/maven-shade-plugin-3.2.1.pom
Progress (1): 4.1/9.3 kB
Progress (1): 8.2/9.3 kB
Progress (1): 9.3 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-shade-plugin/3.2.1/maven-shade-plugin-3.2.1.pom (9.3 kB at 848 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.10.0/maven-artifact-transfer-0.10.0.pom
Progress (1): 4.1/12 kB
Progress (1): 8.2/12 kB
Progress (1): 12 kB    
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.10.0/maven-artifact-transfer-0.10.0.pom (12 kB at 1.2 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/31/maven-shared-components-31.pom
Progress (1): 4.1/5.1 kB
Progress (1): 5.1 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/31/maven-shared-components-31.pom (5.1 kB at 639 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm/6.2.1/asm-6.2.1.pom
Progress (1): 2.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm/6.2.1/asm-6.2.1.pom (2.9 kB at 368 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-commons/6.2.1/asm-commons-6.2.1.pom
Progress (1): 3.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-commons/6.2.1/asm-commons-6.2.1.pom (3.7 kB at 306 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-tree/6.2.1/asm-tree-6.2.1.pom
Progress (1): 3.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-tree/6.2.1/asm-tree-6.2.1.pom (3.1 kB at 241 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-analysis/6.2.1/asm-analysis-6.2.1.pom
Progress (1): 3.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-analysis/6.2.1/asm-analysis-6.2.1.pom (3.2 kB at 351 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/jdom/jdom2/2.0.6/jdom2-2.0.6.pom
Progress (1): 4.1/4.6 kB
Progress (1): 4.6 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/jdom/jdom2/2.0.6/jdom2-2.0.6.pom (4.6 kB at 511 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.2/maven-dependency-tree-2.2.pom
Progress (1): 4.1/7.3 kB
Progress (1): 7.3 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.2/maven-dependency-tree-2.2.pom (7.3 kB at 908 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/vafer/jdependency/2.0/jdependency-2.0.pom
Progress (1): 4.1/11 kB
Progress (1): 8.2/11 kB
Progress (1): 11 kB    
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/vafer/jdependency/2.0/jdependency-2.0.pom (11 kB at 1.1 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-analysis/6.2/asm-analysis-6.2.pom
Progress (1): 3.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-analysis/6.2/asm-analysis-6.2.pom (3.2 kB at 394 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-tree/6.2/asm-tree-6.2.pom
Progress (1): 3.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-tree/6.2/asm-tree-6.2.pom (3.1 kB at 347 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-commons/6.2/asm-commons-6.2.pom
Progress (1): 3.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-commons/6.2/asm-commons-6.2.pom (3.7 kB at 407 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-util/6.2/asm-util-6.2.pom
Progress (1): 3.6 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-util/6.2/asm-util-6.2.pom (3.6 kB at 304 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/bdgenomics/adam/adam-shade-spark2_2.12/0.32.0/adam-shade-spark2_2.12-0.32.0.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.10.0/maven-artifact-transfer-0.10.0.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/3.0.1/maven-common-artifact-filters-3.0.1.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm/6.2.1/asm-6.2.1.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-utils/3.1.0/maven-shared-utils-3.1.0.jar
Progress (1): 4.1/13 kB
Progress (1): 8.2/13 kB
Progress (1): 12/13 kB 
Progress (1): 13 kB   
Progress (2): 13 kB | 4.1/128 kB
Progress (2): 13 kB | 8.2/128 kB
Progress (2): 13 kB | 12/128 kB 
Progress (3): 13 kB | 12/128 kB | 4.1/113 kB
Progress (3): 13 kB | 16/128 kB | 4.1/113 kB
Progress (3): 13 kB | 16/128 kB | 8.2/113 kB
Progress (4): 13 kB | 16/128 kB | 8.2/113 kB | 4.1/61 kB
Progress (4): 13 kB | 16/128 kB | 12/113 kB | 4.1/61 kB 
Progress (4): 13 kB | 16/128 kB | 12/113 kB | 8.2/61 kB
Progress (5): 13 kB | 16/128 kB | 12/113 kB | 8.2/61 kB | 4.1/164 kB
Progress (5): 13 kB | 16/128 kB | 12/113 kB | 12/61 kB | 4.1/164 kB 
Progress (5): 13 kB | 16/128 kB | 16/113 kB | 12/61 kB | 4.1/164 kB
Progress (5): 13 kB | 16/128 kB | 16/113 kB | 16/61 kB | 4.1/164 kB
Progress (5): 13 kB | 20/128 kB | 16/113 kB | 16/61 kB | 4.1/164 kB
Progress (5): 13 kB | 20/128 kB | 16/113 kB | 16/61 kB | 8.2/164 kB
Progress (5): 13 kB | 25/128 kB | 16/113 kB | 16/61 kB | 8.2/164 kB
                                                                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/bdgenomics/adam/adam-shade-spark2_2.12/0.32.0/adam-shade-spark2_2.12-0.32.0.jar (13 kB at 1.2 MB/s)
Progress (4): 25/128 kB | 20/113 kB | 16/61 kB | 8.2/164 kB
Progress (4): 29/128 kB | 20/113 kB | 16/61 kB | 8.2/164 kB
Progress (4): 29/128 kB | 20/113 kB | 20/61 kB | 8.2/164 kB
Progress (4): 29/128 kB | 20/113 kB | 20/61 kB | 12/164 kB 
Progress (4): 29/128 kB | 20/113 kB | 25/61 kB | 12/164 kB
Progress (4): 33/128 kB | 20/113 kB | 25/61 kB | 12/164 kB
Progress (4): 33/128 kB | 25/113 kB | 25/61 kB | 12/164 kB
                                                          
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-commons/6.2.1/asm-commons-6.2.1.jar
Progress (4): 33/128 kB | 29/113 kB | 25/61 kB | 12/164 kB
Progress (4): 33/128 kB | 29/113 kB | 29/61 kB | 12/164 kB
Progress (4): 33/128 kB | 29/113 kB | 29/61 kB | 16/164 kB
Progress (4): 33/128 kB | 29/113 kB | 33/61 kB | 16/164 kB
Progress (4): 37/128 kB | 29/113 kB | 33/61 kB | 16/164 kB
Progress (4): 37/128 kB | 33/113 kB | 33/61 kB | 16/164 kB
Progress (4): 37/128 kB | 33/113 kB | 33/61 kB | 20/164 kB
Progress (4): 41/128 kB | 33/113 kB | 33/61 kB | 20/164 kB
Progress (4): 41/128 kB | 33/113 kB | 37/61 kB | 20/164 kB
Progress (4): 41/128 kB | 33/113 kB | 37/61 kB | 25/164 kB
Progress (4): 41/128 kB | 33/113 kB | 41/61 kB | 25/164 kB
Progress (4): 45/128 kB | 33/113 kB | 41/61 kB | 25/164 kB
Progress (4): 45/128 kB | 33/113 kB | 45/61 kB | 25/164 kB
Progress (4): 45/128 kB | 37/113 kB | 45/61 kB | 25/164 kB
Progress (4): 45/128 kB | 37/113 kB | 45/61 kB | 29/164 kB
Progress (4): 45/128 kB | 41/113 kB | 45/61 kB | 29/164 kB
Progress (4): 45/128 kB | 41/113 kB | 49/61 kB | 29/164 kB
Progress (4): 49/128 kB | 41/113 kB | 49/61 kB | 29/164 kB
Progress (4): 49/128 kB | 45/113 kB | 49/61 kB | 29/164 kB
Progress (4): 49/128 kB | 45/113 kB | 49/61 kB | 33/164 kB
Progress (4): 49/128 kB | 45/113 kB | 53/61 kB | 33/164 kB
Progress (5): 49/128 kB | 45/113 kB | 53/61 kB | 33/164 kB | 4.1/79 kB
Progress (5): 49/128 kB | 49/113 kB | 53/61 kB | 33/164 kB | 4.1/79 kB
Progress (5): 49/128 kB | 49/113 kB | 53/61 kB | 37/164 kB | 4.1/79 kB
Progress (5): 53/128 kB | 49/113 kB | 53/61 kB | 37/164 kB | 4.1/79 kB
Progress (5): 53/128 kB | 49/113 kB | 53/61 kB | 37/164 kB | 8.2/79 kB
Progress (5): 53/128 kB | 49/113 kB | 57/61 kB | 37/164 kB | 8.2/79 kB
Progress (5): 53/128 kB | 49/113 kB | 57/61 kB | 37/164 kB | 12/79 kB 
Progress (5): 57/128 kB | 49/113 kB | 57/61 kB | 37/164 kB | 12/79 kB
Progress (5): 57/128 kB | 49/113 kB | 57/61 kB | 41/164 kB | 12/79 kB
Progress (5): 61/128 kB | 49/113 kB | 57/61 kB | 41/164 kB | 12/79 kB
Progress (5): 61/128 kB | 53/113 kB | 57/61 kB | 41/164 kB | 12/79 kB
Progress (5): 61/128 kB | 53/113 kB | 57/61 kB | 41/164 kB | 16/79 kB
Progress (5): 61/128 kB | 53/113 kB | 61/61 kB | 41/164 kB | 16/79 kB
Progress (5): 61/128 kB | 57/113 kB | 61/61 kB | 41/164 kB | 16/79 kB
Progress (5): 66/128 kB | 57/113 kB | 61/61 kB | 41/164 kB | 16/79 kB
Progress (5): 66/128 kB | 57/113 kB | 61/61 kB | 45/164 kB | 16/79 kB
Progress (5): 66/128 kB | 57/113 kB | 61/61 kB | 45/164 kB | 20/79 kB
Progress (5): 66/128 kB | 61/113 kB | 61/61 kB | 45/164 kB | 20/79 kB
Progress (5): 66/128 kB | 61/113 kB | 61 kB | 45/164 kB | 20/79 kB   
Progress (5): 70/128 kB | 61/113 kB | 61 kB | 45/164 kB | 20/79 kB
Progress (5): 70/128 kB | 66/113 kB | 61 kB | 45/164 kB | 20/79 kB
Progress (5): 70/128 kB | 66/113 kB | 61 kB | 45/164 kB | 25/79 kB
Progress (5): 70/128 kB | 66/113 kB | 61 kB | 49/164 kB | 25/79 kB
Progress (5): 70/128 kB | 66/113 kB | 61 kB | 49/164 kB | 29/79 kB
Progress (5): 74/128 kB | 66/113 kB | 61 kB | 49/164 kB | 29/79 kB
Progress (5): 74/128 kB | 70/113 kB | 61 kB | 49/164 kB | 29/79 kB
Progress (5): 74/128 kB | 70/113 kB | 61 kB | 49/164 kB | 33/79 kB
Progress (5): 74/128 kB | 74/113 kB | 61 kB | 49/164 kB | 33/79 kB
Progress (5): 74/128 kB | 74/113 kB | 61 kB | 53/164 kB | 33/79 kB
Progress (5): 78/128 kB | 74/113 kB | 61 kB | 53/164 kB | 33/79 kB
Progress (5): 78/128 kB | 74/113 kB | 61 kB | 53/164 kB | 37/79 kB
Progress (5): 78/128 kB | 74/113 kB | 61 kB | 57/164 kB | 37/79 kB
Progress (5): 78/128 kB | 74/113 kB | 61 kB | 61/164 kB | 37/79 kB
Progress (5): 78/128 kB | 74/113 kB | 61 kB | 66/164 kB | 37/79 kB
Progress (5): 78/128 kB | 78/113 kB | 61 kB | 66/164 kB | 37/79 kB
Progress (5): 78/128 kB | 78/113 kB | 61 kB | 66/164 kB | 41/79 kB
Progress (5): 78/128 kB | 78/113 kB | 61 kB | 66/164 kB | 45/79 kB
Progress (5): 82/128 kB | 78/113 kB | 61 kB | 66/164 kB | 45/79 kB
Progress (5): 82/128 kB | 78/113 kB | 61 kB | 66/164 kB | 49/79 kB
                                                                  
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/3.0.1/maven-common-artifact-filters-3.0.1.jar (61 kB at 2.6 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-tree/6.2.1/asm-tree-6.2.1.jar
Progress (4): 82/128 kB | 82/113 kB | 66/164 kB | 49/79 kB
Progress (4): 86/128 kB | 82/113 kB | 66/164 kB | 49/79 kB
Progress (4): 86/128 kB | 82/113 kB | 66/164 kB | 53/79 kB
Progress (4): 86/128 kB | 82/113 kB | 70/164 kB | 53/79 kB
Progress (4): 86/128 kB | 82/113 kB | 74/164 kB | 53/79 kB
Progress (4): 86/128 kB | 82/113 kB | 78/164 kB | 53/79 kB
Progress (4): 86/128 kB | 82/113 kB | 82/164 kB | 53/79 kB
Progress (4): 86/128 kB | 82/113 kB | 82/164 kB | 57/79 kB
Progress (4): 90/128 kB | 82/113 kB | 82/164 kB | 57/79 kB
Progress (4): 90/128 kB | 82/113 kB | 82/164 kB | 61/79 kB
Progress (4): 90/128 kB | 86/113 kB | 82/164 kB | 61/79 kB
Progress (4): 90/128 kB | 86/113 kB | 82/164 kB | 66/79 kB
Progress (4): 94/128 kB | 86/113 kB | 82/164 kB | 66/79 kB
Progress (4): 94/128 kB | 86/113 kB | 86/164 kB | 66/79 kB
Progress (4): 98/128 kB | 86/113 kB | 86/164 kB | 66/79 kB
Progress (4): 98/128 kB | 90/113 kB | 86/164 kB | 66/79 kB
Progress (4): 98/128 kB | 90/113 kB | 90/164 kB | 66/79 kB
Progress (4): 98/128 kB | 90/113 kB | 90/164 kB | 70/79 kB
Progress (4): 98/128 kB | 90/113 kB | 94/164 kB | 70/79 kB
Progress (4): 98/128 kB | 94/113 kB | 94/164 kB | 70/79 kB
Progress (4): 102/128 kB | 94/113 kB | 94/164 kB | 70/79 kB
Progress (4): 102/128 kB | 94/113 kB | 98/164 kB | 70/79 kB
Progress (4): 102/128 kB | 94/113 kB | 98/164 kB | 74/79 kB
Progress (4): 106/128 kB | 94/113 kB | 98/164 kB | 74/79 kB
Progress (4): 106/128 kB | 98/113 kB | 98/164 kB | 74/79 kB
Progress (4): 111/128 kB | 98/113 kB | 98/164 kB | 74/79 kB
Progress (4): 111/128 kB | 98/113 kB | 98/164 kB | 78/79 kB
Progress (4): 111/128 kB | 98/113 kB | 102/164 kB | 78/79 kB
Progress (4): 115/128 kB | 98/113 kB | 102/164 kB | 78/79 kB
Progress (4): 115/128 kB | 98/113 kB | 106/164 kB | 78/79 kB
Progress (4): 115/128 kB | 102/113 kB | 106/164 kB | 78/79 kB
Progress (4): 115/128 kB | 102/113 kB | 106/164 kB | 79 kB   
Progress (4): 115/128 kB | 106/113 kB | 106/164 kB | 79 kB
Progress (4): 115/128 kB | 106/113 kB | 111/164 kB | 79 kB
Progress (4): 115/128 kB | 111/113 kB | 111/164 kB | 79 kB
Progress (5): 115/128 kB | 111/113 kB | 111/164 kB | 79 kB | 4.1/50 kB
Progress (5): 119/128 kB | 111/113 kB | 111/164 kB | 79 kB | 4.1/50 kB
Progress (5): 119/128 kB | 111/113 kB | 111/164 kB | 79 kB | 8.2/50 kB
Progress (5): 119/128 kB | 113 kB | 111/164 kB | 79 kB | 8.2/50 kB    
Progress (5): 119/128 kB | 113 kB | 115/164 kB | 79 kB | 8.2/50 kB
Progress (5): 119/128 kB | 113 kB | 115/164 kB | 79 kB | 12/50 kB 
Progress (5): 123/128 kB | 113 kB | 115/164 kB | 79 kB | 12/50 kB
Progress (5): 123/128 kB | 113 kB | 115/164 kB | 79 kB | 16/50 kB
Progress (5): 127/128 kB | 113 kB | 115/164 kB | 79 kB | 16/50 kB
Progress (5): 127/128 kB | 113 kB | 119/164 kB | 79 kB | 16/50 kB
Progress (5): 128 kB | 113 kB | 119/164 kB | 79 kB | 16/50 kB    
Progress (5): 128 kB | 113 kB | 123/164 kB | 79 kB | 16/50 kB
Progress (5): 128 kB | 113 kB | 123/164 kB | 79 kB | 20/50 kB
Progress (5): 128 kB | 113 kB | 127/164 kB | 79 kB | 20/50 kB
Progress (5): 128 kB | 113 kB | 127/164 kB | 79 kB | 25/50 kB
Progress (5): 128 kB | 113 kB | 131/164 kB | 79 kB | 25/50 kB
Progress (5): 128 kB | 113 kB | 131/164 kB | 79 kB | 29/50 kB
                                                             
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-commons/6.2.1/asm-commons-6.2.1.jar (79 kB at 2.3 MB/s)
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm/6.2.1/asm-6.2.1.jar (113 kB at 3.2 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/jdom/jdom2/2.0.6/jdom2-2.0.6.jar
Progress (3): 128 kB | 131/164 kB | 33/50 kB
Progress (3): 128 kB | 135/164 kB | 33/50 kB
Progress (3): 128 kB | 135/164 kB | 37/50 kB
                                            
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-analysis/6.2.1/asm-analysis-6.2.1.jar
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.10.0/maven-artifact-transfer-0.10.0.jar (128 kB at 3.2 MB/s)
Progress (2): 135/164 kB | 41/50 kB
Progress (2): 139/164 kB | 41/50 kB
Progress (2): 139/164 kB | 45/50 kB
                                   
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.2/maven-dependency-tree-2.2.jar
Progress (2): 139/164 kB | 49/50 kB
Progress (2): 143/164 kB | 49/50 kB
Progress (2): 143/164 kB | 50 kB   
Progress (2): 147/164 kB | 50 kB
Progress (2): 152/164 kB | 50 kB
Progress (2): 156/164 kB | 50 kB
Progress (2): 160/164 kB | 50 kB
Progress (2): 164 kB | 50 kB    
Progress (3): 164 kB | 50 kB | 4.1/305 kB
Progress (3): 164 kB | 50 kB | 8.2/305 kB
Progress (3): 164 kB | 50 kB | 12/305 kB 
Progress (3): 164 kB | 50 kB | 16/305 kB
Progress (3): 164 kB | 50 kB | 20/305 kB
Progress (3): 164 kB | 50 kB | 25/305 kB
Progress (3): 164 kB | 50 kB | 29/305 kB
Progress (3): 164 kB | 50 kB | 33/305 kB
Progress (4): 164 kB | 50 kB | 33/305 kB | 4.1/64 kB
Progress (4): 164 kB | 50 kB | 33/305 kB | 8.2/64 kB
Progress (4): 164 kB | 50 kB | 33/305 kB | 12/64 kB 
Progress (4): 164 kB | 50 kB | 33/305 kB | 16/64 kB
                                                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-tree/6.2.1/asm-tree-6.2.1.jar (50 kB at 1.1 MB/s)
Progress (3): 164 kB | 37/305 kB | 16/64 kB
                                           
Downloading from central: https://repo.maven.apache.org/maven2/org/vafer/jdependency/2.0/jdependency-2.0.jar
Progress (4): 164 kB | 37/305 kB | 16/64 kB | 4.1/33 kB
                                                       
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-utils/3.1.0/maven-shared-utils-3.1.0.jar (164 kB at 3.6 MB/s)
Progress (3): 37/305 kB | 16/64 kB | 8.2/33 kB
Progress (3): 37/305 kB | 20/64 kB | 8.2/33 kB
Progress (3): 41/305 kB | 20/64 kB | 8.2/33 kB
Progress (3): 41/305 kB | 25/64 kB | 8.2/33 kB
Progress (3): 41/305 kB | 25/64 kB | 12/33 kB 
                                             
Downloading from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-util/6.2/asm-util-6.2.jar
Progress (3): 41/305 kB | 25/64 kB | 16/33 kB
Progress (3): 41/305 kB | 29/64 kB | 16/33 kB
Progress (3): 45/305 kB | 29/64 kB | 16/33 kB
Progress (3): 45/305 kB | 33/64 kB | 16/33 kB
Progress (3): 49/305 kB | 33/64 kB | 16/33 kB
Progress (3): 49/305 kB | 33/64 kB | 20/33 kB
Progress (3): 53/305 kB | 33/64 kB | 20/33 kB
Progress (3): 53/305 kB | 37/64 kB | 20/33 kB
Progress (3): 53/305 kB | 37/64 kB | 25/33 kB
Progress (3): 53/305 kB | 41/64 kB | 25/33 kB
Progress (3): 57/305 kB | 41/64 kB | 25/33 kB
Progress (3): 57/305 kB | 45/64 kB | 25/33 kB
Progress (3): 57/305 kB | 45/64 kB | 29/33 kB
Progress (3): 57/305 kB | 49/64 kB | 29/33 kB
Progress (3): 61/305 kB | 49/64 kB | 29/33 kB
Progress (3): 61/305 kB | 49/64 kB | 33 kB   
Progress (3): 66/305 kB | 49/64 kB | 33 kB
Progress (3): 66/305 kB | 53/64 kB | 33 kB
Progress (3): 66/305 kB | 57/64 kB | 33 kB
Progress (3): 66/305 kB | 61/64 kB | 33 kB
Progress (3): 66/305 kB | 64 kB | 33 kB   
Progress (4): 66/305 kB | 64 kB | 33 kB | 4.1/183 kB
Progress (4): 70/305 kB | 64 kB | 33 kB | 4.1/183 kB
Progress (4): 70/305 kB | 64 kB | 33 kB | 8.2/183 kB
Progress (4): 74/305 kB | 64 kB | 33 kB | 8.2/183 kB
Progress (4): 74/305 kB | 64 kB | 33 kB | 12/183 kB 
Progress (4): 78/305 kB | 64 kB | 33 kB | 12/183 kB
Progress (4): 78/305 kB | 64 kB | 33 kB | 16/183 kB
Progress (4): 82/305 kB | 64 kB | 33 kB | 16/183 kB
Progress (5): 82/305 kB | 64 kB | 33 kB | 16/183 kB | 4.1/80 kB
Progress (5): 82/305 kB | 64 kB | 33 kB | 17/183 kB | 4.1/80 kB
Progress (5): 82/305 kB | 64 kB | 33 kB | 17/183 kB | 8.2/80 kB
Progress (5): 82/305 kB | 64 kB | 33 kB | 17/183 kB | 12/80 kB 
Progress (5): 86/305 kB | 64 kB | 33 kB | 17/183 kB | 12/80 kB
Progress (5): 86/305 kB | 64 kB | 33 kB | 17/183 kB | 16/80 kB
Progress (5): 90/305 kB | 64 kB | 33 kB | 17/183 kB | 16/80 kB
Progress (5): 94/305 kB | 64 kB | 33 kB | 17/183 kB | 16/80 kB
Progress (5): 94/305 kB | 64 kB | 33 kB | 21/183 kB | 16/80 kB
Progress (5): 94/305 kB | 64 kB | 33 kB | 21/183 kB | 20/80 kB
Progress (5): 98/305 kB | 64 kB | 33 kB | 21/183 kB | 20/80 kB
                                                              
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-analysis/6.2.1/asm-analysis-6.2.1.jar (33 kB at 605 kB/s)
Progress (4): 98/305 kB | 64 kB | 21/183 kB | 25/80 kB
Progress (4): 98/305 kB | 64 kB | 25/183 kB | 25/80 kB
Progress (4): 98/305 kB | 64 kB | 25/183 kB | 29/80 kB
Progress (4): 102/305 kB | 64 kB | 25/183 kB | 29/80 kB
Progress (4): 102/305 kB | 64 kB | 25/183 kB | 33/80 kB
Progress (4): 102/305 kB | 64 kB | 29/183 kB | 33/80 kB
Progress (4): 106/305 kB | 64 kB | 29/183 kB | 33/80 kB
                                                       
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-tree/2.2/maven-dependency-tree-2.2.jar (64 kB at 1.2 MB/s)
Progress (3): 106/305 kB | 33/183 kB | 33/80 kB
Progress (3): 106/305 kB | 33/183 kB | 37/80 kB
Progress (3): 111/305 kB | 33/183 kB | 37/80 kB
Progress (3): 111/305 kB | 33/183 kB | 41/80 kB
Progress (3): 115/305 kB | 33/183 kB | 41/80 kB
Progress (3): 115/305 kB | 33/183 kB | 45/80 kB
Progress (3): 115/305 kB | 33/183 kB | 49/80 kB
Progress (3): 115/305 kB | 37/183 kB | 49/80 kB
Progress (3): 119/305 kB | 37/183 kB | 49/80 kB
Progress (3): 119/305 kB | 41/183 kB | 49/80 kB
Progress (3): 119/305 kB | 41/183 kB | 53/80 kB
Progress (3): 123/305 kB | 41/183 kB | 53/80 kB
Progress (3): 123/305 kB | 41/183 kB | 57/80 kB
Progress (3): 123/305 kB | 45/183 kB | 57/80 kB
Progress (3): 123/305 kB | 45/183 kB | 61/80 kB
Progress (3): 127/305 kB | 45/183 kB | 61/80 kB
Progress (3): 127/305 kB | 45/183 kB | 66/80 kB
Progress (3): 127/305 kB | 49/183 kB | 66/80 kB
Progress (3): 131/305 kB | 49/183 kB | 66/80 kB
Progress (3): 131/305 kB | 49/183 kB | 70/80 kB
Progress (3): 131/305 kB | 49/183 kB | 74/80 kB
Progress (3): 135/305 kB | 49/183 kB | 74/80 kB
Progress (3): 135/305 kB | 49/183 kB | 78/80 kB
Progress (3): 139/305 kB | 49/183 kB | 78/80 kB
Progress (3): 139/305 kB | 49/183 kB | 80 kB   
Progress (3): 143/305 kB | 49/183 kB | 80 kB
Progress (3): 143/305 kB | 53/183 kB | 80 kB
Progress (3): 147/305 kB | 53/183 kB | 80 kB
Progress (3): 147/305 kB | 58/183 kB | 80 kB
Progress (3): 147/305 kB | 62/183 kB | 80 kB
Progress (3): 147/305 kB | 66/183 kB | 80 kB
Progress (3): 152/305 kB | 66/183 kB | 80 kB
Progress (3): 156/305 kB | 66/183 kB | 80 kB
Progress (3): 160/305 kB | 66/183 kB | 80 kB
Progress (3): 164/305 kB | 66/183 kB | 80 kB
Progress (3): 164/305 kB | 70/183 kB | 80 kB
Progress (3): 164/305 kB | 74/183 kB | 80 kB
Progress (3): 168/305 kB | 74/183 kB | 80 kB
Progress (3): 168/305 kB | 78/183 kB | 80 kB
Progress (3): 172/305 kB | 78/183 kB | 80 kB
Progress (3): 172/305 kB | 82/183 kB | 80 kB
Progress (3): 176/305 kB | 82/183 kB | 80 kB
Progress (3): 180/305 kB | 82/183 kB | 80 kB
Progress (3): 184/305 kB | 82/183 kB | 80 kB
Progress (3): 188/305 kB | 82/183 kB | 80 kB
Progress (3): 188/305 kB | 86/183 kB | 80 kB
Progress (3): 193/305 kB | 86/183 kB | 80 kB
Progress (3): 193/305 kB | 90/183 kB | 80 kB
Progress (3): 197/305 kB | 90/183 kB | 80 kB
Progress (3): 197/305 kB | 94/183 kB | 80 kB
                                            
Downloaded from central: https://repo.maven.apache.org/maven2/org/ow2/asm/asm-util/6.2/asm-util-6.2.jar (80 kB at 1.3 MB/s)
Progress (2): 201/305 kB | 94/183 kB
Progress (2): 201/305 kB | 99/183 kB
Progress (2): 205/305 kB | 99/183 kB
Progress (2): 209/305 kB | 99/183 kB
Progress (2): 213/305 kB | 99/183 kB
Progress (2): 217/305 kB | 99/183 kB
Progress (2): 221/305 kB | 99/183 kB
Progress (2): 221/305 kB | 103/183 kB
Progress (2): 225/305 kB | 103/183 kB
Progress (2): 225/305 kB | 107/183 kB
Progress (2): 229/305 kB | 107/183 kB
Progress (2): 229/305 kB | 111/183 kB
Progress (2): 229/305 kB | 115/183 kB
Progress (2): 233/305 kB | 115/183 kB
Progress (2): 238/305 kB | 115/183 kB
Progress (2): 242/305 kB | 115/183 kB
Progress (2): 246/305 kB | 115/183 kB
Progress (2): 246/305 kB | 119/183 kB
Progress (2): 246/305 kB | 123/183 kB
Progress (2): 250/305 kB | 123/183 kB
Progress (2): 250/305 kB | 127/183 kB
Progress (2): 254/305 kB | 127/183 kB
Progress (2): 254/305 kB | 131/183 kB
Progress (2): 258/305 kB | 131/183 kB
Progress (2): 262/305 kB | 131/183 kB
Progress (2): 266/305 kB | 131/183 kB
Progress (2): 270/305 kB | 131/183 kB
Progress (2): 270/305 kB | 135/183 kB
Progress (2): 274/305 kB | 135/183 kB
Progress (2): 274/305 kB | 139/183 kB
Progress (2): 279/305 kB | 139/183 kB
Progress (2): 279/305 kB | 144/183 kB
Progress (2): 279/305 kB | 148/183 kB
Progress (2): 283/305 kB | 148/183 kB
Progress (2): 287/305 kB | 148/183 kB
Progress (2): 291/305 kB | 148/183 kB
Progress (2): 295/305 kB | 148/183 kB
Progress (2): 295/305 kB | 152/183 kB
Progress (2): 299/305 kB | 152/183 kB
Progress (2): 299/305 kB | 156/183 kB
Progress (2): 303/305 kB | 156/183 kB
Progress (2): 303/305 kB | 160/183 kB
Progress (2): 305 kB | 160/183 kB    
Progress (2): 305 kB | 164/183 kB
Progress (2): 305 kB | 168/183 kB
Progress (2): 305 kB | 172/183 kB
Progress (2): 305 kB | 176/183 kB
Progress (2): 305 kB | 180/183 kB
Progress (2): 305 kB | 183 kB    
                             
Downloaded from central: https://repo.maven.apache.org/maven2/org/jdom/jdom2/2.0.6/jdom2-2.0.6.jar (305 kB at 4.1 MB/s)
Downloaded from central: https://repo.maven.apache.org/maven2/org/vafer/jdependency/2.0/jdependency-2.0.jar (183 kB at 2.4 MB/s)
[INFO] Including org.bdgenomics.mango:mango-cli-spark3_2.12:jar:0.0.6-SNAPSHOT in the shaded jar.
[INFO] Including net.liftweb:lift-json_2.12:jar:3.3.0 in the shaded jar.
[INFO] Including org.scala-lang:scala-library:jar:2.12.6 in the shaded jar.
[INFO] Including org.scala-lang:scalap:jar:2.12.6 in the shaded jar.
[INFO] Including com.thoughtworks.paranamer:paranamer:jar:2.8 in the shaded jar.
[INFO] Including org.apache.avro:avro:jar:1.8.2 in the shaded jar.
[INFO] Including org.codehaus.jackson:jackson-core-asl:jar:1.9.13 in the shaded jar.
[INFO] Including org.codehaus.jackson:jackson-mapper-asl:jar:1.9.13 in the shaded jar.
[INFO] Including org.xerial.snappy:snappy-java:jar:1.0.5 in the shaded jar.
[INFO] Including org.apache.commons:commons-compress:jar:1.8.1 in the shaded jar.
[INFO] Including org.tukaani:xz:jar:1.5 in the shaded jar.
[INFO] Including org.slf4j:slf4j-api:jar:1.7.7 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-avro:jar:1.10.1 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-column:jar:1.10.1 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-common:jar:1.10.1 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-encoding:jar:1.10.1 in the shaded jar.
[INFO] Including commons-codec:commons-codec:jar:1.10 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-hadoop:jar:1.10.1 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-jackson:jar:1.10.1 in the shaded jar.
[INFO] Including commons-pool:commons-pool:jar:1.6 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-format:jar:2.4.0 in the shaded jar.
[INFO] Including it.unimi.dsi:fastutil:jar:7.0.13 in the shaded jar.
[INFO] Including org.apache.parquet:parquet-scala_2.10:jar:1.10.1 in the shaded jar.
[INFO] Including org.bdgenomics.adam:adam-cli-spark2_2.12:jar:0.32.0 in the shaded jar.
[INFO] Including org.bdgenomics.adam:adam-apis-spark2_2.12:jar:0.32.0 in the shaded jar.
[INFO] Including args4j:args4j:jar:2.33 in the shaded jar.
[INFO] Including net.codingwell:scala-guice_2.12:jar:4.2.1 in the shaded jar.
[INFO] Including com.google.inject:guice:jar:4.2.0 in the shaded jar.
[INFO] Including javax.inject:javax.inject:jar:1 in the shaded jar.
[INFO] Including aopalliance:aopalliance:jar:1.0 in the shaded jar.
[INFO] Including org.scala-lang:scala-reflect:jar:2.12.6 in the shaded jar.
[INFO] Including com.google.code.findbugs:jsr305:jar:1.3.9 in the shaded jar.
[INFO] Including org.bdgenomics.adam:adam-core-spark2_2.12:jar:0.32.0 in the shaded jar.
[INFO] Including com.esotericsoftware.kryo:kryo:jar:2.24.0 in the shaded jar.
[INFO] Including com.esotericsoftware.minlog:minlog:jar:1.2 in the shaded jar.
[INFO] Including org.objenesis:objenesis:jar:2.1 in the shaded jar.
[INFO] Including commons-io:commons-io:jar:2.6 in the shaded jar.
[INFO] Including org.clapper:grizzled-slf4j_2.12:jar:1.3.4 in the shaded jar.
[INFO] Including org.seqdoop:hadoop-bam:jar:7.9.2 in the shaded jar.
[INFO] Including com.github.jsr203hadoop:jsr203hadoop:jar:1.0.3 in the shaded jar.
[INFO] Including com.github.samtools:htsjdk:jar:2.19.0 in the shaded jar.
[INFO] Including org.apache.commons:commons-jexl:jar:2.1.1 in the shaded jar.
[INFO] Including commons-logging:commons-logging:jar:1.1.1 in the shaded jar.
[INFO] Including gov.nih.nlm.ncbi:ngs-java:jar:2.9.0 in the shaded jar.
[INFO] Including org.apache.httpcomponents:httpclient:jar:4.5.7 in the shaded jar.
[INFO] Including org.apache.httpcomponents:httpcore:jar:4.4.11 in the shaded jar.
[INFO] Including com.google.guava:guava:jar:27.0-jre in the shaded jar.
[INFO] Including com.google.guava:failureaccess:jar:1.0 in the shaded jar.
[INFO] Including com.google.guava:listenablefuture:jar:9999.0-empty-to-avoid-conflict-with-guava in the shaded jar.
[INFO] Including org.checkerframework:checker-qual:jar:2.5.2 in the shaded jar.
[INFO] Including com.google.errorprone:error_prone_annotations:jar:2.2.0 in the shaded jar.
[INFO] Including com.google.j2objc:j2objc-annotations:jar:1.1 in the shaded jar.
[INFO] Including org.codehaus.mojo:animal-sniffer-annotations:jar:1.17 in the shaded jar.
[INFO] Including org.bdgenomics.adam:adam-codegen-spark2_2.12:jar:0.32.0 in the shaded jar.
[INFO] Including org.bdgenomics.bdg-formats:bdg-formats:jar:0.15.0 in the shaded jar.
[INFO] Including org.bdgenomics.utils:utils-cli-spark2_2.12:jar:0.3.0 in the shaded jar.
[INFO] Including org.bdgenomics.utils:utils-misc-spark2_2.12:jar:0.3.0 in the shaded jar.
[INFO] Including org.bdgenomics.utils:utils-intervalrdd-spark2_2.12:jar:0.3.0 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-server:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including javax.servlet:javax.servlet-api:jar:3.1.0 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-http:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-util:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-io:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-webapp:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-xml:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-servlet:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.eclipse.jetty:jetty-security:jar:9.4.17.v20190418 in the shaded jar.
[INFO] Including org.scalatra:scalatra_2.12:jar:2.5.0 in the shaded jar.
[INFO] Including org.scalatra:scalatra-common_2.12:jar:2.5.0 in the shaded jar.
[INFO] Including com.googlecode.juniversalchardet:juniversalchardet:jar:1.0.3 in the shaded jar.
[INFO] Including eu.medsea.mimeutil:mime-util:jar:2.1.3 in the shaded jar.
[INFO] Including org.apache.commons:commons-lang3:jar:3.5 in the shaded jar.
[INFO] Including org.scala-lang.modules:scala-parser-combinators_2.12:jar:1.0.4 in the shaded jar.
[INFO] Including org.scala-lang.modules:scala-xml_2.12:jar:1.0.6 in the shaded jar.
[INFO] Including org.scalatra.scalate:scalate-core_2.12:jar:1.9.1 in the shaded jar.
[INFO] Including org.scala-lang:scala-compiler:jar:2.12.8 in the shaded jar.
[INFO] Including org.scalatra.scalate:scalate-util_2.12:jar:1.9.1 in the shaded jar.
[INFO] Including org.bdgenomics.mango:mango-core-spark3_2.12:jar:0.0.6-SNAPSHOT in the shaded jar.
[INFO] Including org.bdgenomics.utils:utils-io-spark2_2.12:jar:0.3.0 in the shaded jar.
[INFO] Including com.google.protobuf:protobuf-java:jar:3.0.0-beta-3 in the shaded jar.
[INFO] Including com.google.protobuf:protobuf-java-util:jar:3.0.0-beta-3 in the shaded jar.
[INFO] Including com.google.code.gson:gson:jar:2.3 in the shaded jar.
[INFO] Including org.ga4gh:ga4gh-schemas:jar:0.6.0a10 in the shaded jar.
[INFO] Including org.bdgenomics.convert:convert-ga4gh:jar:0.9.0 in the shaded jar.
[INFO] Including org.bdgenomics.convert:convert-htsjdk:jar:0.9.0 in the shaded jar.
[INFO] Including com.google.inject.extensions:guice-assistedinject:jar:4.2.2 in the shaded jar.
[INFO] Including org.bdgenomics.convert:convert:jar:0.9.0 in the shaded jar.
[WARNING] WORKAROUND:  refusing to add class org/apache/parquet/avro/AvroSchemaConverter$2.class from jar /home/jenkins/.m2/repository/org/apache/parquet/parquet-avro/1.10.1/parquet-avro-1.10.1.jar
[WARNING] WORKAROUND:  refusing to add class org/apache/parquet/avro/AvroSchemaConverter.class from jar /home/jenkins/.m2/repository/org/apache/parquet/parquet-avro/1.10.1/parquet-avro-1.10.1.jar
[WARNING] WORKAROUND:  refusing to add class org/apache/parquet/avro/AvroSchemaConverter$1.class from jar /home/jenkins/.m2/repository/org/apache/parquet/parquet-avro/1.10.1/parquet-avro-1.10.1.jar
[WARNING] adam-cli-spark2_2.12-0.32.0.jar, mango-cli-spark3_2.12-0.0.6-SNAPSHOT.jar define 3 overlapping classes: 
[WARNING]   - org.bdgenomics.adam.cli.CommandGroup
[WARNING]   - org.bdgenomics.adam.cli.InitArgs
[WARNING]   - org.bdgenomics.adam.cli.CommandGroup$
[WARNING] guava-27.0-jre.jar, failureaccess-1.0.jar define 2 overlapping classes: 
[WARNING]   - com.google.common.util.concurrent.internal.InternalFutureFailureAccess
[WARNING]   - com.google.common.util.concurrent.internal.InternalFutures
[WARNING] maven-shade-plugin has detected that some class files are
[WARNING] present in two or more JARs. When this happens, only one
[WARNING] single version of the class is copied to the uber jar.
[WARNING] Usually this is not harmful and you can skip these warnings,
[WARNING] otherwise try to manually exclude artifacts based on
[WARNING] mvn dependency:tree -Ddetail=true and the above output.
[WARNING] See http://maven.apache.org/plugins/maven-shade-plugin/
[INFO] Replacing original artifact with shaded artifact.
[INFO] Replacing /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/target/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT.jar with /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-assembly/target/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-shaded.jar
[INFO] 
[INFO] --------< org.bdgenomics.mango:mango-distribution-spark3_2.12 >---------
[INFO] Building mango_2.12: Distribution 0.0.6-SNAPSHOT                   [4/5]
[INFO] --------------------------------[ pom ]---------------------------------
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/2.2-beta-5/maven-assembly-plugin-2.2-beta-5.pom
Progress (1): 4.1/15 kB
Progress (1): 8.2/15 kB
Progress (1): 12/15 kB 
Progress (1): 15 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/2.2-beta-5/maven-assembly-plugin-2.2-beta-5.pom (15 kB at 1.5 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-plugins/16/maven-plugins-16.pom
Progress (1): 4.1/13 kB
Progress (1): 8.2/13 kB
Progress (1): 12/13 kB 
Progress (1): 13 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-plugins/16/maven-plugins-16.pom (13 kB at 1.6 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/2.2-beta-5/maven-assembly-plugin-2.2-beta-5.jar
Progress (1): 4.1/209 kB
Progress (1): 8.2/209 kB
Progress (1): 12/209 kB 
Progress (1): 16/209 kB
Progress (1): 20/209 kB
Progress (1): 25/209 kB
Progress (1): 29/209 kB
Progress (1): 33/209 kB
Progress (1): 37/209 kB
Progress (1): 41/209 kB
Progress (1): 45/209 kB
Progress (1): 49/209 kB
Progress (1): 53/209 kB
Progress (1): 57/209 kB
Progress (1): 61/209 kB
Progress (1): 66/209 kB
Progress (1): 70/209 kB
Progress (1): 74/209 kB
Progress (1): 78/209 kB
Progress (1): 82/209 kB
Progress (1): 86/209 kB
Progress (1): 90/209 kB
Progress (1): 94/209 kB
Progress (1): 98/209 kB
Progress (1): 102/209 kB
Progress (1): 106/209 kB
Progress (1): 111/209 kB
Progress (1): 115/209 kB
Progress (1): 119/209 kB
Progress (1): 123/209 kB
Progress (1): 127/209 kB
Progress (1): 131/209 kB
Progress (1): 135/209 kB
Progress (1): 139/209 kB
Progress (1): 143/209 kB
Progress (1): 147/209 kB
Progress (1): 152/209 kB
Progress (1): 156/209 kB
Progress (1): 160/209 kB
Progress (1): 164/209 kB
Progress (1): 168/209 kB
Progress (1): 172/209 kB
Progress (1): 176/209 kB
Progress (1): 180/209 kB
Progress (1): 184/209 kB
Progress (1): 188/209 kB
Progress (1): 193/209 kB
Progress (1): 197/209 kB
Progress (1): 201/209 kB
Progress (1): 205/209 kB
Progress (1): 209 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/2.2-beta-5/maven-assembly-plugin-2.2-beta-5.jar (209 kB at 10 MB/s)
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ mango-distribution-spark3_2.12 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ mango-distribution-spark3_2.12 ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default) @ mango-distribution-spark3_2.12 ---
[INFO] Modified 0 of 0 .scala files
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ mango-distribution-spark3_2.12 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ mango-distribution-spark3_2.12 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-source-plugin:3.0.1:jar-no-fork (attach-sources) @ mango-distribution-spark3_2.12 ---
[INFO] 
[INFO] --- maven-javadoc-plugin:3.1.0:jar (attach-javadocs) @ mango-distribution-spark3_2.12 ---
[INFO] 
[INFO] >>> scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) > generate-sources @ mango-distribution-spark3_2.12 >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ mango-distribution-spark3_2.12 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ mango-distribution-spark3_2.12 ---
[INFO] 
[INFO] <<< scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) < generate-sources @ mango-distribution-spark3_2.12 <<<
[INFO] 
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) @ mango-distribution-spark3_2.12 ---
[INFO] No source files found
[INFO] 
[INFO] --- maven-assembly-plugin:2.2-beta-5:single (default) @ mango-distribution-spark3_2.12 ---
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.1/maven-common-artifact-filters-1.1.pom
Progress (1): 2.8 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.1/maven-common-artifact-filters-1.1.pom (2.8 kB at 346 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/10/maven-shared-components-10.pom
Progress (1): 4.1/8.4 kB
Progress (1): 8.2/8.4 kB
Progress (1): 8.4 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/10/maven-shared-components-10.pom (8.4 kB at 937 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/9/maven-parent-9.pom
Progress (1): 4.1/33 kB
Progress (1): 8.2/33 kB
Progress (1): 12/33 kB 
Progress (1): 16/33 kB
Progress (1): 20/33 kB
Progress (1): 25/33 kB
Progress (1): 29/33 kB
Progress (1): 33/33 kB
Progress (1): 33 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/9/maven-parent-9.pom (33 kB at 3.0 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0/maven-project-2.0.pom
Progress (1): 1.6 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0/maven-project-2.0.pom (1.6 kB at 204 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0/maven-2.0.pom
Progress (1): 4.1/8.8 kB
Progress (1): 8.2/8.8 kB
Progress (1): 8.8 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0/maven-2.0.pom (8.8 kB at 1.3 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0/maven-profile-2.0.pom
Progress (1): 1.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0/maven-profile-2.0.pom (1.4 kB at 172 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0/maven-model-2.0.pom
Progress (1): 2.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0/maven-model-2.0.pom (2.4 kB at 344 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0/maven-artifact-manager-2.0.pom
Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0/maven-artifact-manager-2.0.pom (1.3 kB at 193 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0/maven-repository-metadata-2.0.pom
Progress (1): 1.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0/maven-repository-metadata-2.0.pom (1.2 kB at 175 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0/maven-artifact-2.0.pom
Progress (1): 495/723 B
Progress (1): 723 B    
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0/maven-artifact-2.0.pom (723 B at 90 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0/maven-core-2.0.pom
Progress (1): 4.1/5.6 kB
Progress (1): 5.6 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0/maven-core-2.0.pom (5.6 kB at 560 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0/maven-settings-2.0.pom
Progress (1): 1.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0/maven-settings-2.0.pom (1.4 kB at 172 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0/maven-plugin-parameter-documenter-2.0.pom
Progress (1): 1.5 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0/maven-plugin-parameter-documenter-2.0.pom (1.5 kB at 218 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0/maven-reporting-api-2.0.pom
Progress (1): 1.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0/maven-reporting-api-2.0.pom (1.1 kB at 139 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting/2.0/maven-reporting-2.0.pom
Progress (1): 504 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting/2.0/maven-reporting-2.0.pom (504 B at 72 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/doxia/doxia-sink-api/1.0-alpha-4/doxia-sink-api-1.0-alpha-4.pom
Progress (1): 1.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/doxia/doxia-sink-api/1.0-alpha-4/doxia-sink-api-1.0-alpha-4.pom (1.1 kB at 156 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0/maven-error-diagnostics-2.0.pom
Progress (1): 812 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0/maven-error-diagnostics-2.0.pom (812 B at 102 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0/maven-plugin-registry-2.0.pom
Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0/maven-plugin-registry-2.0.pom (1.3 kB at 160 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0/maven-plugin-api-2.0.pom
Progress (1): 601 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0/maven-plugin-api-2.0.pom (601 B at 75 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0/maven-plugin-descriptor-2.0.pom
Progress (1): 1.5 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0/maven-plugin-descriptor-2.0.pom (1.5 kB at 209 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0/maven-monitor-2.0.pom
Progress (1): 400 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0/maven-monitor-2.0.pom (400 B at 67 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/1.2/plexus-utils-1.2.pom
Progress (1): 767 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/1.2/plexus-utils-1.2.pom (767 B at 110 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus/1.0.5/plexus-1.0.5.pom
Progress (1): 4.1/5.9 kB
Progress (1): 5.9 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus/1.0.5/plexus-1.0.5.pom (5.9 kB at 849 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.7/plexus-interpolation-1.7.pom
Progress (1): 2.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.7/plexus-interpolation-1.7.pom (2.9 kB at 415 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/1.0-alpha-12/plexus-archiver-1.0-alpha-12.pom
Progress (1): 1.6 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/1.0-alpha-12/plexus-archiver-1.0-alpha-12.pom (1.6 kB at 225 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/1.0-alpha-4/plexus-io-1.0-alpha-4.pom
Progress (1): 1.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/1.0-alpha-4/plexus-io-1.0-alpha-4.pom (1.2 kB at 149 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/file-management/1.1/file-management-1.1.pom
Progress (1): 2.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/file-management/1.1/file-management-1.1.pom (2.7 kB at 380 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/4/maven-shared-components-4.pom
Progress (1): 2.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/4/maven-shared-components-4.pom (2.2 kB at 316 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/4/maven-parent-4.pom
Progress (1): 4.1/10.0 kB
Progress (1): 8.2/10.0 kB
Progress (1): 10.0 kB    
                     
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/4/maven-parent-4.pom (10.0 kB at 1.4 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-io/1.0/maven-shared-io-1.0.pom
Progress (1): 3.0 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-io/1.0/maven-shared-io-1.0.pom (3.0 kB at 433 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.2/maven-artifact-2.0.2.pom
Progress (1): 765 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.2/maven-artifact-2.0.2.pom (765 B at 128 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.2/maven-2.0.2.pom
Progress (1): 4.1/13 kB
Progress (1): 8.2/13 kB
Progress (1): 12/13 kB 
Progress (1): 13 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.2/maven-2.0.2.pom (13 kB at 1.9 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/1.1/plexus-utils-1.1.pom
Progress (1): 767 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/1.1/plexus-utils-1.1.pom (767 B at 96 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.2/maven-artifact-manager-2.0.2.pom
Progress (1): 1.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.2/maven-artifact-manager-2.0.2.pom (1.4 kB at 199 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.2/maven-repository-metadata-2.0.2.pom
Progress (1): 1.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.2/maven-repository-metadata-2.0.2.pom (1.3 kB at 187 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-provider-api/1.0-alpha-6/wagon-provider-api-1.0-alpha-6.pom
Progress (1): 588 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-provider-api/1.0-alpha-6/wagon-provider-api-1.0-alpha-6.pom (588 B at 74 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon/1.0-alpha-6/wagon-1.0-alpha-6.pom
Progress (1): 4.1/6.4 kB
Progress (1): 6.4 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon/1.0-alpha-6/wagon-1.0-alpha-6.pom (6.4 kB at 640 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.pom
Progress (1): 4.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.pom (4.1 kB at 508 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/8/maven-shared-components-8.pom
Progress (1): 2.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/8/maven-shared-components-8.pom (2.7 kB at 334 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/7/maven-parent-7.pom
Progress (1): 4.1/21 kB
Progress (1): 8.2/21 kB
Progress (1): 12/21 kB 
Progress (1): 16/21 kB
Progress (1): 20/21 kB
Progress (1): 21 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-parent/7/maven-parent-7.pom (21 kB at 1.9 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-filtering/1.0-beta-2/maven-filtering-1.0-beta-2.pom
Progress (1): 4.0 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-filtering/1.0-beta-2/maven-filtering-1.0-beta-2.pom (4.0 kB at 448 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.6/plexus-interpolation-1.6.pom
Progress (1): 2.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.6/plexus-interpolation-1.6.pom (2.9 kB at 363 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-active-collections/1.0-beta-2/plexus-active-collections-1.0-beta-2.pom
Progress (1): 2.8 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-active-collections/1.0-beta-2/plexus-active-collections-1.0-beta-2.pom (2.8 kB at 398 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-container-default/1.0-alpha-22/plexus-container-default-1.0-alpha-22.pom
Progress (1): 3.0 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-container-default/1.0-alpha-22/plexus-container-default-1.0-alpha-22.pom (3.0 kB at 427 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-containers/1.0-alpha-22/plexus-containers-1.0-alpha-22.pom
Progress (1): 1.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-containers/1.0-alpha-22/plexus-containers-1.0-alpha-22.pom (1.9 kB at 269 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.4/maven-plugin-api-2.0.4.pom
Progress (1): 643 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.4/maven-plugin-api-2.0.4.pom (643 B at 107 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.4/maven-2.0.4.pom
Progress (1): 4.1/12 kB
Progress (1): 8.2/12 kB
Progress (1): 12 kB    
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven/2.0.4/maven-2.0.4.pom (12 kB at 1.7 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.4/maven-project-2.0.4.pom
Progress (1): 1.8 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.4/maven-project-2.0.4.pom (1.8 kB at 263 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.4/maven-settings-2.0.4.pom
Progress (1): 1.6 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.4/maven-settings-2.0.4.pom (1.6 kB at 271 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.4/maven-model-2.0.4.pom
Progress (1): 2.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.4/maven-model-2.0.4.pom (2.7 kB at 452 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.4/maven-profile-2.0.4.pom
Progress (1): 1.6 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.4/maven-profile-2.0.4.pom (1.6 kB at 231 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.4/maven-artifact-manager-2.0.4.pom
Progress (1): 1.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.4/maven-artifact-manager-2.0.4.pom (1.4 kB at 194 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.4/maven-repository-metadata-2.0.4.pom
Progress (1): 1.5 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.4/maven-repository-metadata-2.0.4.pom (1.5 kB at 212 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.4/maven-artifact-2.0.4.pom
Progress (1): 765 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.4/maven-artifact-2.0.4.pom (765 B at 128 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.4/maven-archiver-2.4.pom
Progress (1): 3.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.4/maven-archiver-2.4.pom (3.4 kB at 490 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/1.0-alpha-11/plexus-archiver-1.0-alpha-11.pom
Progress (1): 1.8 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/1.0-alpha-11/plexus-archiver-1.0-alpha-11.pom (1.8 kB at 258 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-container-default/1.0-alpha-15/plexus-container-default-1.0-alpha-15.pom
Progress (1): 1.7 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-container-default/1.0-alpha-15/plexus-container-default-1.0-alpha-15.pom (1.7 kB at 244 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-containers/1.0-alpha-15/plexus-containers-1.0-alpha-15.pom
Progress (1): 1.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-containers/1.0-alpha-15/plexus-containers-1.0-alpha-15.pom (1.9 kB at 315 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-component-api/1.0-alpha-15/plexus-component-api-1.0-alpha-15.pom
Progress (1): 948 B
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-component-api/1.0-alpha-15/plexus-component-api-1.0-alpha-15.pom (948 B at 135 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/1.2-alpha-6/plexus-classworlds-1.2-alpha-6.pom
Progress (1): 2.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-classworlds/1.2-alpha-6/plexus-classworlds-1.2-alpha-6.pom (2.4 kB at 339 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/1.0-alpha-3/plexus-io-1.0-alpha-3.pom
Progress (1): 1.4 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/1.0-alpha-3/plexus-io-1.0-alpha-3.pom (1.4 kB at 156 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-component-api/1.0-alpha-16/plexus-component-api-1.0-alpha-16.pom
Progress (1): 2.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-component-api/1.0-alpha-16/plexus-component-api-1.0-alpha-16.pom (2.2 kB at 277 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-containers/1.0-alpha-16/plexus-containers-1.0-alpha-16.pom
Progress (1): 1.9 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-containers/1.0-alpha-16/plexus-containers-1.0-alpha-16.pom (1.9 kB at 314 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/1.4.9/plexus-utils-1.4.9.pom
Progress (1): 2.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/1.4.9/plexus-utils-1.4.9.pom (2.3 kB at 287 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/2.0.1/plexus-utils-2.0.1.pom
Progress (1): 3.3 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/2.0.1/plexus-utils-2.0.1.pom (3.3 kB at 557 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus/2.0.3/plexus-2.0.3.pom
Progress (1): 4.1/15 kB
Progress (1): 8.2/15 kB
Progress (1): 12/15 kB 
Progress (1): 15 kB   
                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus/2.0.3/plexus-2.0.3.pom (15 kB at 1.9 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-repository-builder/1.0-alpha-2/maven-repository-builder-1.0-alpha-2.pom
Progress (1): 3.2 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-repository-builder/1.0-alpha-2/maven-repository-builder-1.0-alpha-2.pom (3.2 kB at 461 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.0-alpha-1/maven-common-artifact-filters-1.0-alpha-1.pom
Progress (1): 1.8 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.0-alpha-1/maven-common-artifact-filters-1.0-alpha-1.pom (1.8 kB at 257 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/6/maven-shared-components-6.pom
Progress (1): 3.1 kB
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-components/6/maven-shared-components-6.pom (3.1 kB at 444 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.1/maven-common-artifact-filters-1.1.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-plugin-testing-harness/1.1/maven-plugin-testing-harness-1.1.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.7/plexus-interpolation-1.7.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/1.0-alpha-12/plexus-archiver-1.0-alpha-12.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/file-management/1.1/file-management-1.1.jar
Progress (1): 4.1/32 kB
Progress (1): 8.2/32 kB
Progress (1): 12/32 kB 
Progress (1): 16/32 kB
Progress (1): 20/32 kB
Progress (2): 20/32 kB | 4.1/30 kB
Progress (2): 25/32 kB | 4.1/30 kB
Progress (2): 25/32 kB | 8.2/30 kB
Progress (2): 29/32 kB | 8.2/30 kB
Progress (2): 29/32 kB | 12/30 kB 
Progress (2): 32 kB | 12/30 kB   
Progress (2): 32 kB | 16/30 kB
Progress (3): 32 kB | 16/30 kB | 4.1/177 kB
Progress (3): 32 kB | 20/30 kB | 4.1/177 kB
Progress (3): 32 kB | 20/30 kB | 8.2/177 kB
Progress (3): 32 kB | 25/30 kB | 8.2/177 kB
Progress (3): 32 kB | 25/30 kB | 12/177 kB 
Progress (3): 32 kB | 29/30 kB | 12/177 kB
Progress (3): 32 kB | 29/30 kB | 16/177 kB
Progress (3): 32 kB | 30 kB | 16/177 kB   
Progress (3): 32 kB | 30 kB | 20/177 kB
Progress (3): 32 kB | 30 kB | 25/177 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 4.1/51 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 8.2/51 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 12/51 kB 
Progress (4): 32 kB | 30 kB | 25/177 kB | 16/51 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 20/51 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 25/51 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 29/51 kB
Progress (4): 32 kB | 30 kB | 25/177 kB | 33/51 kB
Progress (4): 32 kB | 30 kB | 29/177 kB | 33/51 kB
Progress (5): 32 kB | 30 kB | 29/177 kB | 33/51 kB | 4.1/31 kB
Progress (5): 32 kB | 30 kB | 29/177 kB | 37/51 kB | 4.1/31 kB
                                                              
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.1/maven-common-artifact-filters-1.1.jar (30 kB at 2.3 MB/s)
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-plugin-testing-harness/1.1/maven-plugin-testing-harness-1.1.jar (32 kB at 2.5 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.2/maven-artifact-manager-2.0.2.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.jar
Progress (3): 29/177 kB | 41/51 kB | 4.1/31 kB
Progress (3): 29/177 kB | 41/51 kB | 8.2/31 kB
Progress (3): 33/177 kB | 41/51 kB | 8.2/31 kB
Progress (3): 33/177 kB | 41/51 kB | 12/31 kB 
Progress (3): 33/177 kB | 45/51 kB | 12/31 kB
Progress (3): 33/177 kB | 45/51 kB | 16/31 kB
Progress (3): 33/177 kB | 49/51 kB | 16/31 kB
Progress (3): 33/177 kB | 51 kB | 16/31 kB   
Progress (3): 33/177 kB | 51 kB | 20/31 kB
Progress (3): 33/177 kB | 51 kB | 25/31 kB
Progress (3): 33/177 kB | 51 kB | 29/31 kB
Progress (3): 33/177 kB | 51 kB | 31 kB   
Progress (3): 37/177 kB | 51 kB | 31 kB
Progress (3): 41/177 kB | 51 kB | 31 kB
Progress (3): 45/177 kB | 51 kB | 31 kB
Progress (3): 49/177 kB | 51 kB | 31 kB
Progress (4): 49/177 kB | 51 kB | 31 kB | 4.1/39 kB
Progress (5): 49/177 kB | 51 kB | 31 kB | 4.1/39 kB | 4.1/49 kB
Progress (5): 49/177 kB | 51 kB | 31 kB | 8.2/39 kB | 4.1/49 kB
Progress (5): 49/177 kB | 51 kB | 31 kB | 8.2/39 kB | 8.2/49 kB
Progress (5): 49/177 kB | 51 kB | 31 kB | 12/39 kB | 8.2/49 kB 
Progress (5): 49/177 kB | 51 kB | 31 kB | 12/39 kB | 12/49 kB 
Progress (5): 49/177 kB | 51 kB | 31 kB | 16/39 kB | 12/49 kB
Progress (5): 49/177 kB | 51 kB | 31 kB | 16/39 kB | 16/49 kB
Progress (5): 53/177 kB | 51 kB | 31 kB | 16/39 kB | 16/49 kB
                                                             
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-interpolation/1.7/plexus-interpolation-1.7.jar (51 kB at 2.6 MB/s)
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/file-management/1.1/file-management-1.1.jar (31 kB at 1.6 MB/s)
Progress (3): 53/177 kB | 16/39 kB | 20/49 kB
Progress (3): 53/177 kB | 20/39 kB | 20/49 kB
Progress (3): 57/177 kB | 20/39 kB | 20/49 kB
Progress (3): 57/177 kB | 25/39 kB | 20/49 kB
Progress (3): 57/177 kB | 25/39 kB | 25/49 kB
                                             
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-provider-api/1.0-alpha-6/wagon-provider-api-1.0-alpha-6.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.2/maven-repository-metadata-2.0.2.jar
Progress (3): 57/177 kB | 25/39 kB | 29/49 kB
Progress (3): 57/177 kB | 29/39 kB | 29/49 kB
Progress (3): 61/177 kB | 29/39 kB | 29/49 kB
Progress (3): 61/177 kB | 33/39 kB | 29/49 kB
Progress (3): 61/177 kB | 33/39 kB | 33/49 kB
Progress (3): 66/177 kB | 33/39 kB | 33/49 kB
Progress (3): 66/177 kB | 37/39 kB | 33/49 kB
Progress (3): 66/177 kB | 39 kB | 33/49 kB   
Progress (3): 66/177 kB | 39 kB | 37/49 kB
Progress (3): 66/177 kB | 39 kB | 41/49 kB
Progress (3): 66/177 kB | 39 kB | 45/49 kB
Progress (3): 66/177 kB | 39 kB | 49/49 kB
Progress (3): 66/177 kB | 39 kB | 49 kB   
Progress (3): 70/177 kB | 39 kB | 49 kB
Progress (3): 74/177 kB | 39 kB | 49 kB
Progress (3): 78/177 kB | 39 kB | 49 kB
Progress (3): 82/177 kB | 39 kB | 49 kB
Progress (4): 82/177 kB | 39 kB | 49 kB | 4.1/20 kB
Progress (5): 82/177 kB | 39 kB | 49 kB | 4.1/20 kB | 4.1/43 kB
Progress (5): 82/177 kB | 39 kB | 49 kB | 8.2/20 kB | 4.1/43 kB
Progress (5): 82/177 kB | 39 kB | 49 kB | 8.2/20 kB | 8.2/43 kB
Progress (5): 82/177 kB | 39 kB | 49 kB | 12/20 kB | 8.2/43 kB 
Progress (5): 82/177 kB | 39 kB | 49 kB | 16/20 kB | 8.2/43 kB
Progress (5): 82/177 kB | 39 kB | 49 kB | 20 kB | 8.2/43 kB   
                                                           
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.2/maven-artifact-manager-2.0.2.jar (49 kB at 1.8 MB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-filtering/1.0-beta-2/maven-filtering-1.0-beta-2.jar
Progress (4): 82/177 kB | 39 kB | 20 kB | 12/43 kB
Progress (4): 86/177 kB | 39 kB | 20 kB | 12/43 kB
                                                  
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.2/maven-repository-metadata-2.0.2.jar (20 kB at 616 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.6/maven-core-2.0.6.jar
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 4.1/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 8.2/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 12/33 kB 
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 16/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 20/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 25/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 29/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 33/33 kB
Progress (4): 86/177 kB | 39 kB | 12/43 kB | 33 kB   
Progress (4): 86/177 kB | 39 kB | 16/43 kB | 33 kB
                                                  
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-shared-io/1.1/maven-shared-io-1.1.jar (39 kB at 1.1 MB/s)
Progress (3): 90/177 kB | 16/43 kB | 33 kB
                                          
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.6/maven-plugin-parameter-documenter-2.0.6.jar
Progress (3): 90/177 kB | 20/43 kB | 33 kB
Progress (3): 94/177 kB | 20/43 kB | 33 kB
Progress (3): 94/177 kB | 25/43 kB | 33 kB
Progress (3): 94/177 kB | 29/43 kB | 33 kB
Progress (4): 94/177 kB | 29/43 kB | 33 kB | 4.1/152 kB
Progress (4): 94/177 kB | 33/43 kB | 33 kB | 4.1/152 kB
Progress (4): 98/177 kB | 33/43 kB | 33 kB | 4.1/152 kB
Progress (4): 98/177 kB | 33/43 kB | 33 kB | 8.2/152 kB
Progress (4): 98/177 kB | 33/43 kB | 33 kB | 12/152 kB 
Progress (4): 98/177 kB | 33/43 kB | 33 kB | 16/152 kB
Progress (4): 102/177 kB | 33/43 kB | 33 kB | 16/152 kB
Progress (4): 102/177 kB | 37/43 kB | 33 kB | 16/152 kB
                                                       
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-filtering/1.0-beta-2/maven-filtering-1.0-beta-2.jar (33 kB at 873 kB/s)
Progress (3): 106/177 kB | 37/43 kB | 16/152 kB
                                               
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.6/maven-reporting-api-2.0.6.jar
Progress (3): 106/177 kB | 37/43 kB | 20/152 kB
Progress (3): 106/177 kB | 41/43 kB | 20/152 kB
Progress (3): 106/177 kB | 41/43 kB | 25/152 kB
Progress (3): 111/177 kB | 41/43 kB | 25/152 kB
Progress (3): 111/177 kB | 41/43 kB | 29/152 kB
Progress (3): 111/177 kB | 43 kB | 29/152 kB   
Progress (4): 111/177 kB | 43 kB | 29/152 kB | 4.1/21 kB
Progress (4): 111/177 kB | 43 kB | 29/152 kB | 8.2/21 kB
Progress (4): 111/177 kB | 43 kB | 29/152 kB | 12/21 kB 
Progress (4): 111/177 kB | 43 kB | 33/152 kB | 12/21 kB
Progress (4): 115/177 kB | 43 kB | 33/152 kB | 12/21 kB
Progress (4): 115/177 kB | 43 kB | 33/152 kB | 16/21 kB
Progress (4): 115/177 kB | 43 kB | 33/152 kB | 20/21 kB
Progress (4): 115/177 kB | 43 kB | 33/152 kB | 21 kB   
Progress (4): 115/177 kB | 43 kB | 37/152 kB | 21 kB
Progress (4): 119/177 kB | 43 kB | 37/152 kB | 21 kB
Progress (4): 119/177 kB | 43 kB | 41/152 kB | 21 kB
Progress (4): 123/177 kB | 43 kB | 41/152 kB | 21 kB
Progress (4): 123/177 kB | 43 kB | 45/152 kB | 21 kB
Progress (4): 127/177 kB | 43 kB | 45/152 kB | 21 kB
Progress (4): 127/177 kB | 43 kB | 49/152 kB | 21 kB
Progress (4): 131/177 kB | 43 kB | 49/152 kB | 21 kB
Progress (5): 131/177 kB | 43 kB | 49/152 kB | 21 kB | 4.1/9.9 kB
Progress (5): 131/177 kB | 43 kB | 53/152 kB | 21 kB | 4.1/9.9 kB
Progress (5): 135/177 kB | 43 kB | 53/152 kB | 21 kB | 4.1/9.9 kB
Progress (5): 135/177 kB | 43 kB | 57/152 kB | 21 kB | 4.1/9.9 kB
Progress (5): 135/177 kB | 43 kB | 57/152 kB | 21 kB | 8.2/9.9 kB
Progress (5): 135/177 kB | 43 kB | 61/152 kB | 21 kB | 8.2/9.9 kB
Progress (5): 139/177 kB | 43 kB | 61/152 kB | 21 kB | 8.2/9.9 kB
Progress (5): 139/177 kB | 43 kB | 66/152 kB | 21 kB | 8.2/9.9 kB
                                                                 
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/wagon/wagon-provider-api/1.0-alpha-6/wagon-provider-api-1.0-alpha-6.jar (43 kB at 971 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-sink-api/1.0-alpha-7/doxia-sink-api-1.0-alpha-7.jar
Progress (4): 139/177 kB | 66/152 kB | 21 kB | 9.9 kB
                                                     
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-parameter-documenter/2.0.6/maven-plugin-parameter-documenter-2.0.6.jar (21 kB at 461 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0.6/maven-error-diagnostics-2.0.6.jar
Progress (3): 139/177 kB | 70/152 kB | 9.9 kB
Progress (3): 143/177 kB | 70/152 kB | 9.9 kB
Progress (3): 143/177 kB | 74/152 kB | 9.9 kB
Progress (3): 147/177 kB | 74/152 kB | 9.9 kB
Progress (3): 147/177 kB | 78/152 kB | 9.9 kB
Progress (3): 147/177 kB | 82/152 kB | 9.9 kB
Progress (3): 152/177 kB | 82/152 kB | 9.9 kB
Progress (3): 156/177 kB | 82/152 kB | 9.9 kB
Progress (3): 156/177 kB | 86/152 kB | 9.9 kB
Progress (3): 160/177 kB | 86/152 kB | 9.9 kB
Progress (3): 160/177 kB | 90/152 kB | 9.9 kB
Progress (3): 164/177 kB | 90/152 kB | 9.9 kB
Progress (3): 164/177 kB | 94/152 kB | 9.9 kB
Progress (3): 164/177 kB | 98/152 kB | 9.9 kB
Progress (3): 168/177 kB | 98/152 kB | 9.9 kB
Progress (3): 172/177 kB | 98/152 kB | 9.9 kB
Progress (3): 176/177 kB | 98/152 kB | 9.9 kB
Progress (4): 176/177 kB | 98/152 kB | 9.9 kB | 4.1/5.9 kB
Progress (4): 177 kB | 98/152 kB | 9.9 kB | 4.1/5.9 kB    
Progress (4): 177 kB | 102/152 kB | 9.9 kB | 4.1/5.9 kB
Progress (4): 177 kB | 102/152 kB | 9.9 kB | 5.9 kB    
                                                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/reporting/maven-reporting-api/2.0.6/maven-reporting-api-2.0.6.jar (9.9 kB at 203 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0.6/maven-plugin-descriptor-2.0.6.jar
Progress (4): 177 kB | 102/152 kB | 5.9 kB | 4.1/14 kB
Progress (4): 177 kB | 106/152 kB | 5.9 kB | 4.1/14 kB
Progress (4): 177 kB | 106/152 kB | 5.9 kB | 8.2/14 kB
Progress (4): 177 kB | 111/152 kB | 5.9 kB | 8.2/14 kB
Progress (4): 177 kB | 111/152 kB | 5.9 kB | 12/14 kB 
Progress (4): 177 kB | 115/152 kB | 5.9 kB | 12/14 kB
Progress (4): 177 kB | 115/152 kB | 5.9 kB | 14 kB   
Progress (4): 177 kB | 119/152 kB | 5.9 kB | 14 kB
Progress (4): 177 kB | 123/152 kB | 5.9 kB | 14 kB
Progress (4): 177 kB | 127/152 kB | 5.9 kB | 14 kB
Progress (4): 177 kB | 131/152 kB | 5.9 kB | 14 kB
                                                  
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-archiver/1.0-alpha-12/plexus-archiver-1.0-alpha-12.jar (177 kB at 3.4 MB/s)
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-sink-api/1.0-alpha-7/doxia-sink-api-1.0-alpha-7.jar (5.9 kB at 112 kB/s)
Progress (2): 135/152 kB | 14 kB
                                
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.6/maven-monitor-2.0.6.jar
Progress (2): 139/152 kB | 14 kB
                                
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.6/maven-settings-2.0.6.jar
Progress (2): 143/152 kB | 14 kB
Progress (2): 147/152 kB | 14 kB
Progress (3): 147/152 kB | 14 kB | 4.1/37 kB
Progress (3): 152/152 kB | 14 kB | 4.1/37 kB
                                            
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-error-diagnostics/2.0.6/maven-error-diagnostics-2.0.6.jar (14 kB at 252 kB/s)
Progress (2): 152/152 kB | 8.2/37 kB
                                    
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-active-collections/1.0-beta-2/plexus-active-collections-1.0-beta-2.jar
Progress (2): 152 kB | 8.2/37 kB
Progress (2): 152 kB | 12/37 kB 
Progress (2): 152 kB | 16/37 kB
Progress (2): 152 kB | 20/37 kB
Progress (2): 152 kB | 25/37 kB
Progress (2): 152 kB | 29/37 kB
Progress (2): 152 kB | 33/37 kB
Progress (2): 152 kB | 37/37 kB
Progress (2): 152 kB | 37 kB   
Progress (3): 152 kB | 37 kB | 4.1/49 kB
Progress (4): 152 kB | 37 kB | 4.1/49 kB | 4.1/10 kB
Progress (4): 152 kB | 37 kB | 8.2/49 kB | 4.1/10 kB
Progress (4): 152 kB | 37 kB | 12/49 kB | 4.1/10 kB 
Progress (4): 152 kB | 37 kB | 12/49 kB | 8.2/10 kB
Progress (4): 152 kB | 37 kB | 16/49 kB | 8.2/10 kB
Progress (4): 152 kB | 37 kB | 16/49 kB | 10 kB    
Progress (4): 152 kB | 37 kB | 20/49 kB | 10 kB
Progress (4): 152 kB | 37 kB | 25/49 kB | 10 kB
Progress (4): 152 kB | 37 kB | 29/49 kB | 10 kB
Progress (4): 152 kB | 37 kB | 33/49 kB | 10 kB
                                               
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-core/2.0.6/maven-core-2.0.6.jar (152 kB at 2.6 MB/s)
Progress (4): 37 kB | 33/49 kB | 10 kB | 4.1/21 kB
Progress (4): 37 kB | 37/49 kB | 10 kB | 4.1/21 kB
                                                  
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-descriptor/2.0.6/maven-plugin-descriptor-2.0.6.jar (37 kB at 615 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/1.0-alpha-4/plexus-io-1.0-alpha-4.jar
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.4/maven-plugin-api-2.0.4.jar
Progress (3): 41/49 kB | 10 kB | 4.1/21 kB
Progress (3): 41/49 kB | 10 kB | 8.2/21 kB
Progress (3): 45/49 kB | 10 kB | 8.2/21 kB
Progress (3): 45/49 kB | 10 kB | 12/21 kB 
Progress (3): 49 kB | 10 kB | 12/21 kB   
Progress (3): 49 kB | 10 kB | 16/21 kB
Progress (3): 49 kB | 10 kB | 20/21 kB
Progress (3): 49 kB | 10 kB | 21 kB   
                                   
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-monitor/2.0.6/maven-monitor-2.0.6.jar (10 kB at 165 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.4/maven-project-2.0.4.jar
Progress (3): 49 kB | 21 kB | 4.1/8.3 kB
Progress (3): 49 kB | 21 kB | 8.2/8.3 kB
Progress (3): 49 kB | 21 kB | 8.3 kB    
Progress (4): 49 kB | 21 kB | 8.3 kB | 4.1/48 kB
                                                
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.6/maven-settings-2.0.6.jar (49 kB at 755 kB/s)
Progress (3): 21 kB | 8.3 kB | 8.2/48 kB
                                        
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.4/maven-profile-2.0.4.jar
Progress (3): 21 kB | 8.3 kB | 12/48 kB
Progress (3): 21 kB | 8.3 kB | 16/48 kB
                                       
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-active-collections/1.0-beta-2/plexus-active-collections-1.0-beta-2.jar (21 kB at 324 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.4/maven-archiver-2.4.jar
Progress (3): 8.3 kB | 16/48 kB | 4.1/109 kB
Progress (3): 8.3 kB | 20/48 kB | 4.1/109 kB
Progress (3): 8.3 kB | 20/48 kB | 8.2/109 kB
Progress (3): 8.3 kB | 25/48 kB | 8.2/109 kB
Progress (3): 8.3 kB | 25/48 kB | 12/109 kB 
Progress (3): 8.3 kB | 29/48 kB | 12/109 kB
                                           
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-api/2.0.4/maven-plugin-api-2.0.4.jar (8.3 kB at 124 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/2.0.1/plexus-utils-2.0.1.jar
Progress (2): 33/48 kB | 12/109 kB
Progress (2): 33/48 kB | 16/109 kB
Progress (2): 37/48 kB | 16/109 kB
Progress (2): 37/48 kB | 20/109 kB
Progress (2): 41/48 kB | 20/109 kB
Progress (2): 41/48 kB | 25/109 kB
Progress (2): 45/48 kB | 25/109 kB
Progress (3): 45/48 kB | 25/109 kB | 4.1/30 kB
Progress (3): 45/48 kB | 29/109 kB | 4.1/30 kB
Progress (3): 48 kB | 29/109 kB | 4.1/30 kB   
Progress (3): 48 kB | 33/109 kB | 4.1/30 kB
Progress (3): 48 kB | 33/109 kB | 8.2/30 kB
Progress (3): 48 kB | 33/109 kB | 12/30 kB 
Progress (3): 48 kB | 33/109 kB | 16/30 kB
Progress (3): 48 kB | 37/109 kB | 16/30 kB
Progress (3): 48 kB | 41/109 kB | 16/30 kB
Progress (3): 48 kB | 45/109 kB | 16/30 kB
Progress (3): 48 kB | 49/109 kB | 16/30 kB
Progress (3): 48 kB | 49/109 kB | 20/30 kB
Progress (3): 48 kB | 49/109 kB | 25/30 kB
Progress (3): 48 kB | 49/109 kB | 29/30 kB
Progress (3): 48 kB | 49/109 kB | 30 kB   
Progress (3): 48 kB | 53/109 kB | 30 kB
Progress (4): 48 kB | 53/109 kB | 30 kB | 4.1/20 kB
Progress (4): 48 kB | 57/109 kB | 30 kB | 4.1/20 kB
Progress (4): 48 kB | 61/109 kB | 30 kB | 4.1/20 kB
Progress (4): 48 kB | 61/109 kB | 30 kB | 8.2/20 kB
Progress (4): 48 kB | 66/109 kB | 30 kB | 8.2/20 kB
Progress (4): 48 kB | 66/109 kB | 30 kB | 12/20 kB 
Progress (4): 48 kB | 66/109 kB | 30 kB | 16/20 kB
Progress (4): 48 kB | 70/109 kB | 30 kB | 16/20 kB
Progress (4): 48 kB | 70/109 kB | 30 kB | 20 kB   
Progress (4): 48 kB | 74/109 kB | 30 kB | 20 kB
Progress (4): 48 kB | 78/109 kB | 30 kB | 20 kB
Progress (4): 48 kB | 82/109 kB | 30 kB | 20 kB
Progress (5): 48 kB | 82/109 kB | 30 kB | 20 kB | 4.1/222 kB
Progress (5): 48 kB | 82/109 kB | 30 kB | 20 kB | 8.2/222 kB
Progress (5): 48 kB | 82/109 kB | 30 kB | 20 kB | 12/222 kB 
                                                           
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-io/1.0-alpha-4/plexus-io-1.0-alpha-4.jar (48 kB at 663 kB/s)
Progress (4): 86/109 kB | 30 kB | 20 kB | 12/222 kB
                                                   
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.4/maven-artifact-2.0.4.jar
Progress (4): 86/109 kB | 30 kB | 20 kB | 16/222 kB
Progress (4): 90/109 kB | 30 kB | 20 kB | 16/222 kB
Progress (4): 94/109 kB | 30 kB | 20 kB | 16/222 kB
Progress (4): 98/109 kB | 30 kB | 20 kB | 16/222 kB
Progress (4): 98/109 kB | 30 kB | 20 kB | 20/222 kB
Progress (4): 102/109 kB | 30 kB | 20 kB | 20/222 kB
Progress (4): 102/109 kB | 30 kB | 20 kB | 25/222 kB
                                                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.4/maven-profile-2.0.4.jar (30 kB at 409 kB/s)
Progress (3): 106/109 kB | 20 kB | 25/222 kB
                                            
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-archiver/2.4/maven-archiver-2.4.jar (20 kB at 262 kB/s)
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.4/maven-model-2.0.4.jar
Progress (2): 106/109 kB | 29/222 kB
                                    
Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-repository-builder/1.0-alpha-2/maven-repository-builder-1.0-alpha-2.jar
Progress (2): 109 kB | 29/222 kB
Progress (2): 109 kB | 33/222 kB
Progress (2): 109 kB | 37/222 kB
Progress (2): 109 kB | 41/222 kB
Progress (2): 109 kB | 45/222 kB
Progress (2): 109 kB | 49/222 kB
Progress (3): 109 kB | 49/222 kB | 4.1/80 kB
Progress (3): 109 kB | 53/222 kB | 4.1/80 kB
Progress (3): 109 kB | 57/222 kB | 4.1/80 kB
Progress (3): 109 kB | 57/222 kB | 8.2/80 kB
Progress (3): 109 kB | 61/222 kB | 8.2/80 kB
Progress (3): 109 kB | 61/222 kB | 12/80 kB 
Progress (3): 109 kB | 66/222 kB | 12/80 kB
Progress (3): 109 kB | 66/222 kB | 16/80 kB
Progress (3): 109 kB | 70/222 kB | 16/80 kB
Progress (3): 109 kB | 74/222 kB | 16/80 kB
Progress (4): 109 kB | 74/222 kB | 16/80 kB | 4.1/80 kB
Progress (4): 109 kB | 74/222 kB | 20/80 kB | 4.1/80 kB
Progress (4): 109 kB | 78/222 kB | 20/80 kB | 4.1/80 kB
Progress (4): 109 kB | 78/222 kB | 25/80 kB | 4.1/80 kB
Progress (4): 109 kB | 78/222 kB | 25/80 kB | 8.2/80 kB
                                                       
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.4/maven-project-2.0.4.jar (109 kB at 1.4 MB/s)
Progress (3): 78/222 kB | 29/80 kB | 8.2/80 kB
Progress (3): 82/222 kB | 29/80 kB | 8.2/80 kB
Progress (3): 82/222 kB | 33/80 kB | 8.2/80 kB
Progress (3): 82/222 kB | 33/80 kB | 12/80 kB 
Progress (3): 82/222 kB | 33/80 kB | 16/80 kB
Progress (3): 86/222 kB | 33/80 kB | 16/80 kB
Progress (3): 86/222 kB | 37/80 kB | 16/80 kB
Progress (3): 90/222 kB | 37/80 kB | 16/80 kB
Progress (3): 90/222 kB | 41/80 kB | 16/80 kB
Progress (4): 90/222 kB | 41/80 kB | 16/80 kB | 4.1/23 kB
Progress (4): 90/222 kB | 45/80 kB | 16/80 kB | 4.1/23 kB
Progress (4): 90/222 kB | 45/80 kB | 20/80 kB | 4.1/23 kB
Progress (4): 94/222 kB | 45/80 kB | 20/80 kB | 4.1/23 kB
Progress (4): 94/222 kB | 45/80 kB | 25/80 kB | 4.1/23 kB
Progress (4): 94/222 kB | 49/80 kB | 25/80 kB | 4.1/23 kB
Progress (4): 94/222 kB | 49/80 kB | 25/80 kB | 8.2/23 kB
Progress (4): 94/222 kB | 49/80 kB | 29/80 kB | 8.2/23 kB
Progress (4): 98/222 kB | 49/80 kB | 29/80 kB | 8.2/23 kB
Progress (4): 98/222 kB | 49/80 kB | 33/80 kB | 8.2/23 kB
Progress (4): 98/222 kB | 49/80 kB | 33/80 kB | 12/23 kB 
Progress (4): 98/222 kB | 53/80 kB | 33/80 kB | 12/23 kB
Progress (4): 98/222 kB | 53/80 kB | 33/80 kB | 16/23 kB
Progress (4): 98/222 kB | 57/80 kB | 33/80 kB | 16/23 kB
Progress (4): 98/222 kB | 57/80 kB | 37/80 kB | 16/23 kB
Progress (4): 98/222 kB | 57/80 kB | 37/80 kB | 20/23 kB
Progress (4): 102/222 kB | 57/80 kB | 37/80 kB | 20/23 kB
Progress (4): 102/222 kB | 61/80 kB | 37/80 kB | 20/23 kB
Progress (4): 106/222 kB | 61/80 kB | 37/80 kB | 20/23 kB
Progress (4): 106/222 kB | 61/80 kB | 37/80 kB | 23 kB   
Progress (4): 106/222 kB | 61/80 kB | 41/80 kB | 23 kB
Progress (4): 111/222 kB | 61/80 kB | 41/80 kB | 23 kB
Progress (4): 111/222 kB | 66/80 kB | 41/80 kB | 23 kB
Progress (4): 115/222 kB | 66/80 kB | 41/80 kB | 23 kB
Progress (4): 115/222 kB | 66/80 kB | 45/80 kB | 23 kB
Progress (4): 115/222 kB | 66/80 kB | 49/80 kB | 23 kB
Progress (4): 119/222 kB | 66/80 kB | 49/80 kB | 23 kB
Progress (4): 119/222 kB | 70/80 kB | 49/80 kB | 23 kB
Progress (4): 123/222 kB | 70/80 kB | 49/80 kB | 23 kB
Progress (4): 123/222 kB | 74/80 kB | 49/80 kB | 23 kB
Progress (4): 123/222 kB | 74/80 kB | 53/80 kB | 23 kB
Progress (4): 127/222 kB | 74/80 kB | 53/80 kB | 23 kB
Progress (4): 127/222 kB | 74/80 kB | 57/80 kB | 23 kB
Progress (4): 127/222 kB | 78/80 kB | 57/80 kB | 23 kB
Progress (4): 127/222 kB | 78/80 kB | 61/80 kB | 23 kB
Progress (4): 131/222 kB | 78/80 kB | 61/80 kB | 23 kB
Progress (4): 131/222 kB | 78/80 kB | 66/80 kB | 23 kB
Progress (4): 131/222 kB | 80 kB | 66/80 kB | 23 kB   
Progress (4): 135/222 kB | 80 kB | 66/80 kB | 23 kB
Progress (4): 139/222 kB | 80 kB | 66/80 kB | 23 kB
Progress (4): 139/222 kB | 80 kB | 70/80 kB | 23 kB
Progress (4): 143/222 kB | 80 kB | 70/80 kB | 23 kB
Progress (4): 143/222 kB | 80 kB | 74/80 kB | 23 kB
Progress (4): 147/222 kB | 80 kB | 74/80 kB | 23 kB
Progress (4): 147/222 kB | 80 kB | 78/80 kB | 23 kB
Progress (4): 147/222 kB | 80 kB | 80 kB | 23 kB   
                                                
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-repository-builder/1.0-alpha-2/maven-repository-builder-1.0-alpha-2.jar (23 kB at 263 kB/s)
Progress (3): 152/222 kB | 80 kB | 80 kB
Progress (3): 156/222 kB | 80 kB | 80 kB
Progress (3): 160/222 kB | 80 kB | 80 kB
Progress (3): 164/222 kB | 80 kB | 80 kB
Progress (3): 168/222 kB | 80 kB | 80 kB
Progress (3): 172/222 kB | 80 kB | 80 kB
Progress (3): 176/222 kB | 80 kB | 80 kB
                                        
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.4/maven-artifact-2.0.4.jar (80 kB at 892 kB/s)
Progress (2): 180/222 kB | 80 kB
Progress (2): 184/222 kB | 80 kB
Progress (2): 188/222 kB | 80 kB
Progress (2): 193/222 kB | 80 kB
Progress (2): 197/222 kB | 80 kB
                                
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.4/maven-model-2.0.4.jar (80 kB at 872 kB/s)
Progress (1): 201/222 kB
Progress (1): 205/222 kB
Progress (1): 209/222 kB
Progress (1): 213/222 kB
Progress (1): 217/222 kB
Progress (1): 221/222 kB
Progress (1): 222 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/codehaus/plexus/plexus-utils/2.0.1/plexus-utils-2.0.1.jar (222 kB at 2.3 MB/s)
[INFO] Reading assembly descriptor: src/main/assembly/assembly.xml
[INFO] Building tar : /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-distribution/target/mango-distribution-spark3_2.12-0.0.6-SNAPSHOT-bin.tar.gz
[WARNING] Entry: mango-distribution-spark3_2.12-0.0.6-SNAPSHOT/repo/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-javadoc.jar longer than 100 characters.
[WARNING] Resulting tar file can only be processed successfully by GNU compatible tar commands
[WARNING] Entry: mango-distribution-spark3_2.12-0.0.6-SNAPSHOT/repo/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-sources.jar longer than 100 characters.
[INFO] Building tar : /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-distribution/target/mango-distribution-spark3_2.12-0.0.6-SNAPSHOT-bin.tar.bz2
[WARNING] Entry: mango-distribution-spark3_2.12-0.0.6-SNAPSHOT/repo/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-javadoc.jar longer than 100 characters.
[WARNING] Resulting tar file can only be processed successfully by GNU compatible tar commands
[WARNING] Entry: mango-distribution-spark3_2.12-0.0.6-SNAPSHOT/repo/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT-sources.jar longer than 100 characters.
[INFO] Building zip: /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/mango-distribution/target/mango-distribution-spark3_2.12-0.0.6-SNAPSHOT-bin.zip
[INFO] 
[INFO] -----------< org.bdgenomics.mango:mango-parent-spark3_2.12 >------------
[INFO] Building mango_2.12 0.0.6-SNAPSHOT                                 [5/5]
[INFO] --------------------------------[ pom ]---------------------------------
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ mango-parent-spark3_2.12 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ mango-parent-spark3_2.12 ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default) @ mango-parent-spark3_2.12 ---
[INFO] Modified 0 of 41 .scala files
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ mango-parent-spark3_2.12 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ mango-parent-spark3_2.12 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-source-plugin:3.0.1:jar-no-fork (attach-sources) @ mango-parent-spark3_2.12 ---
[INFO] 
[INFO] --- maven-javadoc-plugin:3.1.0:jar (attach-javadocs) @ mango-parent-spark3_2.12 ---
[INFO] 
[INFO] >>> scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) > generate-sources @ mango-parent-spark3_2.12 >>>
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ mango-parent-spark3_2.12 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ mango-parent-spark3_2.12 ---
[INFO] 
[INFO] <<< scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) < generate-sources @ mango-parent-spark3_2.12 <<<
[INFO] 
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:doc-jar (attach-scaladocs) @ mango-parent-spark3_2.12 ---
[INFO] No source files found
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary for mango_2.12 0.0.6-SNAPSHOT:
[INFO] 
[INFO] mango_2.12: CORE ................................... SUCCESS [ 29.294 s]
[INFO] mango_2.12: CLI .................................... SUCCESS [ 47.656 s]
[INFO] Mango_2.12: Assembly ............................... SUCCESS [ 30.380 s]
[INFO] mango_2.12: Distribution ........................... SUCCESS [01:41 min]
[INFO] mango_2.12 ......................................... SUCCESS [  1.919 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time:  03:31 min
[INFO] Finished at: 2020-08-19T12:32:05Z
[INFO] ------------------------------------------------------------------------

# make sure that the distribution package contains an assembly jar
# if no assembly jar is found, this will exit with code 1 and fail the build
tar tzf mango-distribution/target/mango-distribution*-bin.tar.gz | \
    grep mango-assembly | \
    grep jar | \
    grep -v -e sources -e javadoc
+ tar tzf mango-distribution/target/mango-distribution-spark3_2.12-0.0.6-SNAPSHOT-bin.tar.gz
+ grep jar
+ grep -v -e sources -e javadoc
+ grep mango-assembly
mango-distribution-spark3_2.12-0.0.6-SNAPSHOT/repo/mango-assembly-spark3_2.12-0.0.6-SNAPSHOT.jar

# we are done with maven, so clean up the maven temp dir
find ${MANGO_MVN_TMP_DIR}
+ find /tmp/mangoTestMvnIPSmVRC
/tmp/mangoTestMvnIPSmVRC
/tmp/mangoTestMvnIPSmVRC/1221805556916531119
/tmp/mangoTestMvnIPSmVRC/mmbroken3554889425551245441.genome
/tmp/mangoTestMvnIPSmVRC/1775143511026468529
/tmp/mangoTestMvnIPSmVRC/1775143511026468529/anoGam1.genome
/tmp/mangoTestMvnIPSmVRC/5339042930921767507
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/._references.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/._processingSteps.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/_readGroups.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/_processingSteps.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/_SUCCESS
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/_partitionedByStartPos
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1/positionBin=26
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1/positionBin=26/part-00000-2f84fbdf-063d-45de-ad42-771cdc46f954.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1/positionBin=26/.part-00000-2f84fbdf-063d-45de-ad42-771cdc46f954.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1/positionBin=240
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1/positionBin=240/part-00000-2f84fbdf-063d-45de-ad42-771cdc46f954.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=1/positionBin=240/.part-00000-2f84fbdf-063d-45de-ad42-771cdc46f954.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/._partitionedByStartPos.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/_references.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=2
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=2/positionBin=189
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=2/positionBin=189/part-00000-2f84fbdf-063d-45de-ad42-771cdc46f954.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/referenceName=2/positionBin=189/.part-00000-2f84fbdf-063d-45de-ad42-771cdc46f954.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/._SUCCESS.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606.adam/._readGroups.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1141014258703590606
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852
/tmp/mangoTestMvnIPSmVRC/fake-3512801018155623019.txt
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/._references.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/._processingSteps.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/_readGroups.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/_processingSteps.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/_SUCCESS
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/_partitionedByStartPos
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1/positionBin=26
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1/positionBin=26/part-00000-e483394d-242c-4f36-b78a-edbeaedff249.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1/positionBin=26/.part-00000-e483394d-242c-4f36-b78a-edbeaedff249.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1/positionBin=240
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1/positionBin=240/part-00000-e483394d-242c-4f36-b78a-edbeaedff249.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=1/positionBin=240/.part-00000-e483394d-242c-4f36-b78a-edbeaedff249.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/._partitionedByStartPos.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/_references.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=2
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=2/positionBin=189
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=2/positionBin=189/part-00000-e483394d-242c-4f36-b78a-edbeaedff249.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/referenceName=2/positionBin=189/.part-00000-e483394d-242c-4f36-b78a-edbeaedff249.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/._SUCCESS.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835.adam/._readGroups.avro.crc
/tmp/mangoTestMvnIPSmVRC/mmbroken8745151231051701150.genome
/tmp/mangoTestMvnIPSmVRC/4980701061802161530
/tmp/mangoTestMvnIPSmVRC/4980701061802161530/anoGam1.genome
/tmp/mangoTestMvnIPSmVRC/invalidBuild.genome4952146666127342843
/tmp/mangoTestMvnIPSmVRC/invalidBuild.genome4952146666127342843/properties.txt
/tmp/mangoTestMvnIPSmVRC/invalidBuild.genome8198242789934114953
/tmp/mangoTestMvnIPSmVRC/invalidBuild.genome8198242789934114953/properties.txt
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/._references.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/_SUCCESS
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/_partitionedByStartPos
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/referenceName=1
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/referenceName=1/positionBin=0
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/referenceName=1/positionBin=0/.part-00000-859f1e76-cbb8-41a9-94b3-4a632bbd5cc2.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/referenceName=1/positionBin=0/part-00000-859f1e76-cbb8-41a9-94b3-4a632bbd5cc2.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/._partitionedByStartPos.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/_references.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/_samples.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/._SUCCESS.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/._samples.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/._header.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184.adam/_header
/tmp/mangoTestMvnIPSmVRC/snappy-1.0.5-libsnappyjava.so
/tmp/mangoTestMvnIPSmVRC/fake-5028187153568572035.sh
/tmp/mangoTestMvnIPSmVRC/fake-3944696173852564422.sh
/tmp/mangoTestMvnIPSmVRC/genomes2972000361085382300
/tmp/mangoTestMvnIPSmVRC/genomes2972000361085382300/hg19.genome
/tmp/mangoTestMvnIPSmVRC/fake-3526100286071724719.txt
/tmp/mangoTestMvnIPSmVRC/TempSuite3417088002956913184
/tmp/mangoTestMvnIPSmVRC/TempSuite1439345241475865835
/tmp/mangoTestMvnIPSmVRC/genomes6706949309432013206
/tmp/mangoTestMvnIPSmVRC/genomes6706949309432013206/hg19.genome
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/._references.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/_SUCCESS
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/_partitionedByStartPos
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/referenceName=1
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/referenceName=1/positionBin=0
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/referenceName=1/positionBin=0/.part-00000-6b107ddb-2ee1-4ef5-8c82-1f0eeedc7bb0.c000.snappy.parquet.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/referenceName=1/positionBin=0/part-00000-6b107ddb-2ee1-4ef5-8c82-1f0eeedc7bb0.c000.snappy.parquet
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/._partitionedByStartPos.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/_references.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/_samples.avro
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/._SUCCESS.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/._samples.avro.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/._header.crc
/tmp/mangoTestMvnIPSmVRC/TempSuite4175942446383830852.adam/_header
rm -rf ${MANGO_MVN_TMP_DIR}
+ rm -rf /tmp/mangoTestMvnIPSmVRC

find . -name pom.xml \
    -exec sed -i.bak \
    -e "s:sun.io.serialization.extendedDebugInfo=true -Djava.io.tmpdir=${MANGO_MVN_TMP_DIR}:sun.io.serialization.extendedDebugInfo=true:g" \
    {} \;
+ find . -name pom.xml -exec sed -i.bak -e 's:sun.io.serialization.extendedDebugInfo=true -Djava.io.tmpdir=/tmp/mangoTestMvnIPSmVRC:sun.io.serialization.extendedDebugInfo=true:g' '{}' ';'
find . -name "*.bak" -exec rm -f {} \;
+ find . -name '*.bak' -exec rm -f '{}' ';'

# set spark artifact string for downloading assembly
SPARK=spark-${SPARK_VERSION}
+ SPARK=spark-2.4.6

# what hadoop version are we on? format string for downloading spark assembly
if [[ $HADOOP_VERSION =~ ^2\.7 ]]; then
    HADOOP=hadoop2.7
else
    echo "Unknown Hadoop version."
    exit 1
fi
+ [[ 2.7.5 =~ ^2\.7 ]]
+ HADOOP=hadoop2.7

# Spark 2.4.3+ and less than 3.0.0 needs special case for Scala 2.12
if [ ${SCALAVER} == 2.12 ] && [ ${SPARK_VERSION} == 2.4.6 ]
then
    curl \
        -L "https://www.apache.org/dyn/mirrors/mirrors.cgi?action=download&filename=spark/${SPARK}/${SPARK}-bin-without-hadoop-scala-2.12.tgz" \
        -o ${MANGO_TMP_DIR}/${SPARK}-bin-without-hadoop-scala-2.12.tgz

    tar xzf ${MANGO_TMP_DIR}/${SPARK}-bin-without-hadoop-scala-2.12.tgz --directory ${MANGO_TMP_DIR}
    export SPARK_HOME=${MANGO_TMP_DIR}/${SPARK}-bin-without-hadoop-scala-2.12

    curl \
        -L "https://www.apache.org/dyn/mirrors/mirrors.cgi?action=download&filename=hadoop/core/hadoop-2.7.7/hadoop-2.7.7.tar.gz" \
        -o ${MANGO_TMP_DIR}/hadoop-2.7.7.tar.gz

    tar xzf ${MANGO_TMP_DIR}/hadoop-2.7.7.tar.gz --directory ${MANGO_TMP_DIR}

    # remove references to avro 1.7.x
    find ${MANGO_TMP_DIR}/hadoop-2.7.7 -name *.jar | grep avro | xargs rm

    export SPARK_DIST_CLASSPATH=$(${MANGO_TMP_DIR}/hadoop-2.7.7/bin/hadoop classpath)
else
    curl \
        -v \
        -L "https://www.apache.org/dyn/mirrors/mirrors.cgi?action=download&filename=spark/${SPARK}/${SPARK}-bin-${HADOOP}.tgz" \
        -o ${MANGO_TMP_DIR}/${SPARK}-bin-${HADOOP}.tgz

    tar xzf ${MANGO_TMP_DIR}/${SPARK}-bin-${HADOOP}.tgz --directory ${MANGO_TMP_DIR}
    export SPARK_HOME=${MANGO_TMP_DIR}/${SPARK}-bin-${HADOOP}
fi
+ '[' 2.12 == 2.12 ']'
+ '[' 2.4.6 == 2.4.6 ']'
+ curl -L 'https://www.apache.org/dyn/mirrors/mirrors.cgi?action=download&filename=spark/spark-2.4.6/spark-2.4.6-bin-without-hadoop-scala-2.12.tgz' -o /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/spark-2.4.6-bin-without-hadoop-scala-2.12.tgz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

  0  139M    0 43136    0     0  38303      0  1:03:47  0:00:01  1:03:46 38303
  2  139M    2 3124k    0     0  1477k      0  0:01:36  0:00:02  0:01:34 3116k
  2  139M    2 4035k    0     0  1138k      0  0:02:05  0:00:03  0:02:02 1652k
  2  139M    2 4101k    0     0   996k      0  0:02:23  0:00:04  0:02:19 1356k
  3  139M    3 5664k    0     0  1107k      0  0:02:09  0:00:05  0:02:04 1410k
  5  139M    5 7400k    0     0  1209k      0  0:01:58  0:00:06  0:01:52 1474k
  7  139M    7 10.3M    0     0  1491k      0  0:01:35  0:00:07  0:01:28 1497k
 10  139M   10 14.5M    0     0  1831k      0  0:01:18  0:00:08  0:01:10 2369k
 11  139M   11 15.4M    0     0  1737k      0  0:01:22  0:00:09  0:01:13 2347k
 11  139M   11 15.8M    0     0  1605k      0  0:01:29  0:00:10  0:01:19 2114k
 13  139M   13 18.9M    0     0  1745k      0  0:01:22  0:00:11  0:01:11 2400k
 16  139M   16 23.0M    0     0  1945k      0  0:01:13  0:00:12  0:01:01 2591k
 18  139M   18 26.5M    0     0  2073k      0  0:01:09  0:00:13  0:00:56 2464k
 21  139M   21 30.7M    0     0  2231k      0  0:01:04  0:00:14  0:00:50 3134k
 25  139M   25 34.9M    0     0  2368k      0  0:01:00  0:00:15  0:00:45 3915k
 27  139M   27 39.0M    0     0  2482k      0  0:00:57  0:00:16  0:00:41 4122k
 30  139M   30 42.2M    0     0  2525k      0  0:00:56  0:00:17  0:00:39 3931k
 32  139M   32 46.0M    0     0  2605k      0  0:00:54  0:00:18  0:00:36 3999k
 35  139M   35 50.2M    0     0  2691k      0  0:00:53  0:00:19  0:00:34 3989k
 38  139M   38 53.5M    0     0  2712k      0  0:00:52  0:00:20  0:00:32 3734k
 38  139M   38 53.6M    0     0  2601k      0  0:00:55  0:00:21  0:00:34 2981k
 39  139M   39 55.0M    0     0  2549k      0  0:00:56  0:00:22  0:00:34 2630k
 41  139M   41 58.3M    0     0  2585k      0  0:00:55  0:00:23  0:00:32 2512k
 43  139M   43 60.8M    0     0  2582k      0  0:00:55  0:00:24  0:00:31 2167k
 46  139M   46 64.3M    0     0  2624k      0  0:00:54  0:00:25  0:00:29 2259k
 48  139M   48 67.9M    0     0  2663k      0  0:00:53  0:00:26  0:00:27 2929k
 50  139M   50 70.8M    0     0  2676k      0  0:00:53  0:00:27  0:00:26 3240k
 53  139M   53 75.1M    0     0  2736k      0  0:00:52  0:00:28  0:00:24 3434k
 56  139M   56 79.3M    0     0  2789k      0  0:00:51  0:00:29  0:00:22 3788k
 59  139M   59 83.5M    0     0  2840k      0  0:00:50  0:00:30  0:00:20 3926k
 62  139M   62 87.7M    0     0  2887k      0  0:00:49  0:00:31  0:00:18 4055k
 65  139M   65 91.8M    0     0  2928k      0  0:00:48  0:00:32  0:00:16 4291k
 68  139M   68 96.0M    0     0  2970k      0  0:00:48  0:00:33  0:00:15 4285k
 71  139M   71  100M    0     0  3008k      0  0:00:47  0:00:34  0:00:13 4283k
 74  139M   74  104M    0     0  3045k      0  0:00:47  0:00:35  0:00:12 4277k
 77  139M   77  108M    0     0  3079k      0  0:00:46  0:00:36  0:00:10 4272k
 80  139M   80  112M    0     0  3110k      0  0:00:46  0:00:37  0:00:09 4279k
 83  139M   83  116M    0     0  3129k      0  0:00:45  0:00:38  0:00:07 4187k
 86  139M   86  120M    0     0  3159k      0  0:00:45  0:00:39  0:00:06 4189k
 89  139M   89  124M    0     0  3188k      0  0:00:44  0:00:40  0:00:04 4191k
 92  139M   92  129M    0     0  3214k      0  0:00:44  0:00:41  0:00:03 4193k
 95  139M   95  133M    0     0  3240k      0  0:00:44  0:00:42  0:00:02 4205k
 97  139M   97  136M    0     0  3247k      0  0:00:44  0:00:43  0:00:01 4142k
 99  139M   99  139M    0     0  3234k      0  0:00:44  0:00:44 --:--:-- 3816k
100  139M  100  139M    0     0  3231k      0  0:00:44  0:00:44 --:--:-- 3648k
+ tar xzf /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/spark-2.4.6-bin-without-hadoop-scala-2.12.tgz --directory /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded
+ export SPARK_HOME=/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/spark-2.4.6-bin-without-hadoop-scala-2.12
+ SPARK_HOME=/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/spark-2.4.6-bin-without-hadoop-scala-2.12
+ curl -L 'https://www.apache.org/dyn/mirrors/mirrors.cgi?action=download&filename=hadoop/core/hadoop-2.7.7/hadoop-2.7.7.tar.gz' -o /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

  0  208M    0  237k    0     0   273k      0  0:12:59 --:--:--  0:12:59  273k
  0  208M    0 1395k    0     0   748k      0  0:04:45  0:00:01  0:04:44 1161k
  1  208M    1 3855k    0     0  1347k      0  0:02:38  0:00:02  0:02:36 1813k
  3  208M    3 6688k    0     0  1733k      0  0:02:03  0:00:03  0:02:00 2156k
  4  208M    4 9677k    0     0  1991k      0  0:01:47  0:00:04  0:01:43 2363k
  5  208M    5 12.5M    0     0  2186k      0  0:01:37  0:00:05  0:01:32 2518k
  7  208M    7 15.5M    0     0  2315k      0  0:01:32  0:00:06  0:01:26 2899k
  9  208M    9 18.8M    0     0  2460k      0  0:01:26  0:00:07  0:01:19 3098k
 11  208M   11 23.0M    0     0  2665k      0  0:01:20  0:00:08  0:01:12 3385k
 13  208M   13 27.2M    0     0  2831k      0  0:01:15  0:00:09  0:01:06 3647k
 15  208M   15 31.4M    0     0  2963k      0  0:01:12  0:00:10  0:01:02 3874k
 17  208M   17 35.6M    0     0  3076k      0  0:01:09  0:00:11  0:00:58 4119k
 19  208M   19 39.8M    0     0  3171k      0  0:01:07  0:00:12  0:00:55 4287k
 21  208M   21 43.9M    0     0  3250k      0  0:01:05  0:00:13  0:00:52 4286k
 23  208M   23 48.1M    0     0  3321k      0  0:01:04  0:00:14  0:00:50 4288k
 25  208M   25 52.3M    0     0  3382k      0  0:01:03  0:00:15  0:00:48 4291k
 27  208M   27 56.5M    0     0  3436k      0  0:01:02  0:00:16  0:00:46 4289k
 28  208M   28 59.3M    0     0  3400k      0  0:01:02  0:00:17  0:00:45 3987k
 28  208M   28 59.5M    0     0  3182k      0  0:01:07  0:00:19  0:00:48 3004k
 28  208M   28 59.5M    0     0  3063k      0  0:01:09  0:00:19  0:00:50 2301k
 28  208M   28 59.5M    0     0  2899k      0  0:01:13  0:00:21  0:00:52 1415k
 28  208M   28 59.5M    0     0  2754k      0  0:01:17  0:00:22  0:00:55  573k
 28  208M   28 59.5M    0     0  2666k      0  0:01:20  0:00:22  0:00:58 33424
 28  208M   28 59.5M    0     0  2544k      0  0:01:23  0:00:23  0:01:00  3917
 28  208M   28 59.5M    0     0  2434k      0  0:01:27  0:00:25  0:01:02  3937
 28  208M   28 59.5M    0     0  2332k      0  0:01:31  0:00:26  0:01:05  3960
 28  208M   28 59.5M    0     0  2269k      0  0:01:34  0:00:26  0:01:08  3974
 28  208M   28 59.5M    0     0  2180k      0  0:01:37  0:00:27  0:01:10  3974
 28  208M   28 59.5M    0     0  2098k      0  0:01:41  0:00:29  0:01:12  3974
 28  208M   28 59.5M    0     0  2022k      0  0:01:45  0:00:30  0:01:15  3967
 28  208M   28 59.5M    0     0  1974k      0  0:01:48  0:00:30  0:01:18  3969
 28  208M   28 59.5M    0     0  1906k      0  0:01:52  0:00:31  0:01:21  3954
 28  208M   28 59.5M    0     0  1843k      0  0:01:55  0:00:33  0:01:22  3955
 28  208M   28 59.5M    0     0  1784k      0  0:01:59  0:00:34  0:01:25  3955
 28  208M   28 59.5M    0     0  1747k      0  0:02:02  0:00:34  0:01:28  3960
 28  208M   28 59.5M    0     0  1694k      0  0:02:06  0:00:36  0:01:30  3958
 28  208M   28 59.6M    0     0  1655k      0  0:02:08  0:00:36  0:01:32 23030
 28  208M   28 59.7M    0     0  1613k      0  0:02:12  0:00:37  0:01:35 40430
 28  208M   28 59.9M    0     0  1579k      0  0:02:15  0:00:38  0:01:37 86484
 28  208M   28 60.3M    0     0  1550k      0  0:02:17  0:00:39  0:01:38  161k
 29  208M   29 61.0M    0     0  1530k      0  0:02:19  0:00:40  0:01:39  316k
 29  208M   29 62.3M    0     0  1525k      0  0:02:20  0:00:41  0:01:39  554k
 31  208M   31 64.7M    0     0  1547k      0  0:02:18  0:00:42  0:01:36 1040k
 32  208M   32 68.7M    0     0  1604k      0  0:02:13  0:00:43  0:01:30 1795k
 34  208M   34 72.9M    0     0  1664k      0  0:02:08  0:00:44  0:01:24 2571k
 36  208M   36 77.0M    0     0  1721k      0  0:02:04  0:00:45  0:01:19 3282k
 38  208M   38 81.2M    0     0  1776k      0  0:02:00  0:00:46  0:01:14 3879k
 40  208M   40 84.6M    0     0  1811k      0  0:01:57  0:00:47  0:01:10 4079k
 41  208M   41 85.5M    0     0  1791k      0  0:01:59  0:00:48  0:01:11 3418k
 41  208M   41 85.6M    0     0  1743k      0  0:02:02  0:00:50  0:01:12 2391k
 41  208M   41 85.6M    0     0  1711k      0  0:02:04  0:00:51  0:01:13 1632k
 41  208M   41 85.6M    0     0  1682k      0  0:02:06  0:00:52  0:01:14  846k
 41  208M   41 85.6M    0     0  1654k      0  0:02:09  0:00:53  0:01:16  193k
 41  208M   41 85.6M    0     0  1627k      0  0:02:11  0:00:53  0:01:18 18792
 41  208M   41 85.7M    0     0  1600k      0  0:02:13  0:00:54  0:01:19 27852
 41  208M   41 85.8M    0     0  1574k      0  0:02:15  0:00:55  0:01:20 50319
 41  208M   41 86.1M    0     0  1550k      0  0:02:17  0:00:56  0:01:21 99249
 41  208M   41 86.4M    0     0  1530k      0  0:02:19  0:00:57  0:01:22  175k
 41  208M   41 87.1M    0     0  1515k      0  0:02:20  0:00:58  0:01:22  300k
 42  208M   42 88.0M    0     0  1505k      0  0:02:21  0:00:59  0:01:22  459k
 43  208M   43 89.9M    0     0  1513k      0  0:02:21  0:01:00  0:01:21  837k
 44  208M   44 93.4M    0     0  1547k      0  0:02:18  0:01:01  0:01:17 1511k
 46  208M   46 97.6M    0     0  1591k      0  0:02:14  0:01:02  0:01:12 2289k
 48  208M   48  101M    0     0  1633k      0  0:02:10  0:01:03  0:01:07 3019k
 50  208M   50  106M    0     0  1674k      0  0:02:07  0:01:04  0:01:03 3698k
 52  208M   52  110M    0     0  1711k      0  0:02:04  0:01:05  0:00:59 4121k
 54  208M   54  114M    0     0  1750k      0  0:02:02  0:01:06  0:00:56 4258k
 56  208M   56  117M    0     0  1773k      0  0:02:00  0:01:07  0:00:53 4064k
 58  208M   58  121M    0     0  1809k      0  0:01:58  0:01:08  0:00:50 4064k
 58  208M   58  122M    0     0  1791k      0  0:01:59  0:01:10  0:00:49 3198k
 58  208M   58  123M    0     0  1777k      0  0:02:00  0:01:10  0:00:50 2643k
 60  208M   60  125M    0     0  1788k      0  0:01:59  0:01:11  0:00:48 2304k
 62  208M   62  129M    0     0  1823k      0  0:01:57  0:01:12  0:00:45 2496k
 64  208M   64  133M    0     0  1856k      0  0:01:55  0:01:13  0:00:42 2499k
 66  208M   66  138M    0     0  1888k      0  0:01:53  0:01:14  0:00:39 3376k
 67  208M   67  139M    0     0  1887k      0  0:01:53  0:01:15  0:00:38 3445k
 67  208M   67  140M    0     0  1857k      0  0:01:54  0:01:17  0:00:37 2789k
 67  208M   67  140M    0     0  1840k      0  0:01:56  0:01:17  0:00:39 2085k
 67  208M   67  140M    0     0  1814k      0  0:01:57  0:01:19  0:00:38 1213k
 67  208M   67  140M    0     0  1788k      0  0:01:59  0:01:20  0:00:39  383k
 67  208M   67  140M    0     0  1772k      0  0:02:00  0:01:20  0:00:40 34455
 67  208M   67  140M    0     0  1748k      0  0:02:02  0:01:22  0:00:40  3869
 67  208M   67  140M    0     0  1724k      0  0:02:03  0:01:23  0:00:40  3870
 67  208M   67  140M    0     0  1709k      0  0:02:04  0:01:23  0:00:41  3870
 67  208M   67  140M    0     0  1686k      0  0:02:06  0:01:25  0:00:41  3869
 67  208M   67  140M    0     0  1664k      0  0:02:08  0:01:26  0:00:42  3870
 67  208M   67  140M    0     0  1650k      0  0:02:09  0:01:26  0:00:43  3870
 67  208M   67  140M    0     0  1629k      0  0:02:11  0:01:28  0:00:43  3869
 67  208M   67  140M    0     0  1609k      0  0:02:12  0:01:29  0:00:43  3870
 67  208M   67  140M    0     0  1595k      0  0:02:13  0:01:29  0:00:44  5952
 67  208M   67  140M    0     0  1580k      0  0:02:15  0:01:30  0:00:45 35444
 67  208M   67  140M    0     0  1565k      0  0:02:16  0:01:31  0:00:45 63096
 67  208M   67  140M    0     0  1551k      0  0:02:17  0:01:32  0:00:45  125k
 67  208M   67  141M    0     0  1541k      0  0:02:18  0:01:33  0:00:45  258k
 68  208M   68  142M    0     0  1535k      0  0:02:19  0:01:34  0:00:45  441k
 69  208M   69  144M    0     0  1541k      0  0:02:18  0:01:35  0:00:43  831k
 70  208M   70  147M    0     0  1563k      0  0:02:16  0:01:36  0:00:40 1530k
 72  208M   72  151M    0     0  1590k      0  0:02:14  0:01:37  0:00:37 2307k
 74  208M   74  156M    0     0  1617k      0  0:02:12  0:01:38  0:00:34 3044k
 76  208M   76  160M    0     0  1644k      0  0:02:09  0:01:39  0:00:30 3709k
 78  208M   78  164M    0     0  1670k      0  0:02:07  0:01:40  0:00:27 4136k
 80  208M   80  168M    0     0  1695k      0  0:02:05  0:01:41  0:00:24 4263k
 82  208M   82  172M    0     0  1721k      0  0:02:04  0:01:42  0:00:22 4284k
 84  208M   84  177M    0     0  1745k      0  0:02:02  0:01:43  0:00:19 4282k
 86  208M   86  181M    0     0  1770k      0  0:02:00  0:01:44  0:00:16 4280k
 88  208M   88  185M    0     0  1793k      0  0:01:59  0:01:45  0:00:14 4287k
 90  208M   90  189M    0     0  1817k      0  0:01:57  0:01:46  0:00:11 4286k
 92  208M   92  193M    0     0  1838k      0  0:01:56  0:01:47  0:00:09 4261k
 93  208M   93  194M    0     0  1822k      0  0:01:57  0:01:49  0:00:08 3318k
 93  208M   93  194M    0     0  1809k      0  0:01:58  0:01:49  0:00:09 2633k
 93  208M   93  194M    0     0  1795k      0  0:01:58  0:01:50  0:00:08 1828k
 93  208M   93  194M    0     0  1780k      0  0:01:59  0:01:51  0:00:08  990k
 93  208M   93  194M    0     0  1767k      0  0:02:00  0:01:52  0:00:08  221k
 93  208M   93  195M    0     0  1756k      0  0:02:01  0:01:53  0:00:08  226k
 94  208M   94  196M    0     0  1749k      0  0:02:02  0:01:54  0:00:08  412k
 94  208M   94  197M    0     0  1742k      0  0:02:02  0:01:55  0:00:07  560k
 95  208M   95  198M    0     0  1741k      0  0:02:02  0:01:56  0:00:06  875k
 96  208M   96  200M    0     0  1743k      0  0:02:02  0:01:57  0:00:05 1216k
 97  208M   97  202M    0     0  1742k      0  0:02:02  0:01:59  0:00:03 1437k
 97  208M   97  202M    0     0  1731k      0  0:02:03  0:01:59  0:00:04 1326k
 97  208M   97  203M    0     0  1719k      0  0:02:04  0:02:00  0:00:04 1209k
 97  208M   97  203M    0     0  1709k      0  0:02:04  0:02:01  0:00:03  969k
 97  208M   97  203M    0     0  1699k      0  0:02:05  0:02:02  0:00:03  651k
 97  208M   97  204M    0     0  1689k      0  0:02:06  0:02:03  0:00:03  343k
 98  208M   98  204M    0     0  1680k      0  0:02:07  0:02:04  0:00:03  429k
 98  208M   98  205M    0     0  1675k      0  0:02:07  0:02:05  0:00:02  582k
 99  208M   99  206M    0     0  1669k      0  0:02:07  0:02:06  0:00:01  688k
100  208M  100  208M    0     0  1671k      0  0:02:07  0:02:07 --:--:--  975k
+ tar xzf /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7.tar.gz --directory /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded
+ grep avro
+ find /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7 -name '*.jar'
+ xargs rm
++ /tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/bin/hadoop classpath
+ export 'SPARK_DIST_CLASSPATH=/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/etc/hadoop:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/common/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/common/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/hdfs:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/hdfs/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/hdfs/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/yarn/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/yarn/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/mapreduce/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/mapreduce/*:/contrib/capacity-scheduler/*.jar'
+ SPARK_DIST_CLASSPATH='/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/etc/hadoop:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/common/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/common/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/hdfs:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/hdfs/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/hdfs/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/yarn/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/yarn/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/mapreduce/lib/*:/tmp/mangoTestbjdu6pk/deleteMePleaseThisIsNoLongerNeeded/hadoop-2.7.7/share/hadoop/mapreduce/*:/contrib/capacity-scheduler/*.jar'



# create a conda environment for python build, if necessary
pythons=( 3.6 )
+ pythons=(3.6)
for python in ${pythons[*]}
do
    conda create -y -q -c conda-forge -n mango-build-${PYTHON_UUID} python=${python} pip=19.3.1 jupyterlab=2.0.1
    conda activate mango-build-${PYTHON_UUID}

    # install npm and node in the venv for mango-pileup
    conda install -y nodejs

    # prepare mango python
    pushd mango-python
    make prepare
    popd

    # we can run the python build, now that we have a spark executable
    # requires SPARK_HOME to be set
    mvn -U \
        -P python,distribution \
        package \
        -DskipTests \
        -Dhadoop.version=${HADOOP_VERSION} \
        -Dspark.version=${SPARK_VERSION}

    # clean mango python
    pushd mango-python
    make clean
    popd

    # prepare mango viz
    pushd mango-pileup
    make prepare
    popd

    # run the widgets tests (mango-pileup)
    mvn -P widgets test

    # clean mango viz
    pushd mango-pileup
    make clean
    popd

    # make sure that the distribution package contains an egg
    # if no assembly jar is found, this will exit with code 1 and fail the build
    tar tzf mango-distribution/target/mango-distribution*-bin.tar.gz | \
        grep bdgenomics.mango | \
        grep egg

    # test mango notebook, output to temporary log file
    MANGO_NOTEBOOK_LOGS=${MANGO_TMP_DIR}/mango-notebook.log

    # notebook args --ip=0.0.0.0 --no-browser --allow-root required for docker
    bash -xv ${PROJECT_ROOT}/bin/mango-notebook -- --ip=0.0.0.0 --no-browser --allow-root &> ${MANGO_NOTEBOOK_LOGS} &

    # sleep for 2 seconds to let mango-notebook start up
    sleep 2

    # if mango-notebook fails, then trying to kill the process will fail
    if kill $! ; then
        echo "Mango Notebook Succeeded"
    else
        echo "Mango Notebook failed with logs:"
        cat ${MANGO_NOTEBOOK_LOGS}
        exit 1
    fi

    # deactivate and remove the conda env
    set +e +x
    source deactivate
    conda remove -y --name mango-build-${PYTHON_UUID} --all
    set -e -x
done
+ for python in ${pythons[*]}
+ conda create -y -q -c conda-forge -n mango-build-a757f1d0-c1df-47c7-997d-2aff9d66b75f python=3.6 pip=19.3.1 jupyterlab=2.0.1
Collecting package metadata (current_repodata.json): ...working... done
Solving environment: ...working... failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/jenkins/.conda/envs/mango-build-a757f1d0-c1df-47c7-997d-2aff9d66b75f

  added / updated specs:
    - jupyterlab=2.0.1
    - pip=19.3.1
    - python=3.6


The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    _libgcc_mutex-0.1          |      conda_forge           3 KB  conda-forge
    _openmp_mutex-4.5          |            1_gnu          22 KB  conda-forge
    argon2-cffi-20.1.0         |   py36h8c4c3a4_1          47 KB  conda-forge
    attrs-19.3.0               |             py_0          35 KB  conda-forge
    backcall-0.2.0             |     pyh9f0ad1d_0          13 KB  conda-forge
    backports-1.0              |             py_2           4 KB  conda-forge
    backports.functools_lru_cache-1.6.1|             py_0           8 KB  conda-forge
    bleach-3.1.5               |     pyh9f0ad1d_0         112 KB  conda-forge
    brotlipy-0.7.0             |py36h8c4c3a4_1000         346 KB  conda-forge
    ca-certificates-2020.6.20  |       hecda079_0         145 KB  conda-forge
    certifi-2020.6.20          |   py36h9f0ad1d_0         151 KB  conda-forge
    cffi-1.14.1                |   py36h0ff685e_0         223 KB  conda-forge
    chardet-3.0.4              |py36h9f0ad1d_1006         188 KB  conda-forge
    cryptography-3.0           |   py36h45558ae_0         640 KB  conda-forge
    decorator-4.4.2            |             py_0          11 KB  conda-forge
    defusedxml-0.6.0           |             py_0          22 KB  conda-forge
    entrypoints-0.3            |py36h9f0ad1d_1001          12 KB  conda-forge
    idna-2.10                  |     pyh9f0ad1d_0          52 KB  conda-forge
    importlib-metadata-1.7.0   |   py36h9f0ad1d_0          44 KB  conda-forge
    importlib_metadata-1.7.0   |                0           3 KB  conda-forge
    ipykernel-5.3.4            |   py36h95af2a2_0         165 KB  conda-forge
    ipython-7.16.1             |   py36h95af2a2_0         1.1 MB  conda-forge
    ipython_genutils-0.2.0     |             py_1          21 KB  conda-forge
    jedi-0.17.2                |   py36h9f0ad1d_0         950 KB  conda-forge
    jinja2-2.11.2              |     pyh9f0ad1d_0          93 KB  conda-forge
    json5-0.9.4                |     pyh9f0ad1d_0          20 KB  conda-forge
    jsonschema-3.2.0           |   py36h9f0ad1d_1          89 KB  conda-forge
    jupyter_client-6.1.6       |             py_0          75 KB  conda-forge
    jupyter_core-4.6.3         |   py36h9f0ad1d_1          71 KB  conda-forge
    jupyterlab-2.0.1           |             py_0         5.7 MB  conda-forge
    jupyterlab_server-1.2.0    |             py_0          25 KB  conda-forge
    ld_impl_linux-64-2.34      |       hc38a660_9         612 KB  conda-forge
    libffi-3.2.1               |    he1b5a44_1007          47 KB  conda-forge
    libgcc-ng-9.3.0            |      h24d8f2e_15         7.8 MB  conda-forge
    libgomp-9.3.0              |      h24d8f2e_15         378 KB  conda-forge
    libsodium-1.0.18           |       h516909a_0         339 KB  conda-forge
    libstdcxx-ng-9.3.0         |      hdf63c60_15         4.0 MB  conda-forge
    markupsafe-1.1.1           |   py36h8c4c3a4_1          26 KB  conda-forge
    mistune-0.8.4              |py36h8c4c3a4_1001          53 KB  conda-forge
    nbconvert-5.6.1            |   py36h9f0ad1d_1         487 KB  conda-forge
    nbformat-5.0.7             |             py_0          99 KB  conda-forge
    ncurses-6.2                |       he1b5a44_1         993 KB  conda-forge
    notebook-6.1.3             |   py36h9f0ad1d_0         6.2 MB  conda-forge
    openssl-1.1.1g             |       h516909a_1         2.1 MB  conda-forge
    packaging-20.4             |     pyh9f0ad1d_0          32 KB  conda-forge
    pandoc-2.10.1              |       h516909a_0        19.3 MB  conda-forge
    pandocfilters-1.4.2        |             py_1           9 KB  conda-forge
    parso-0.7.1                |     pyh9f0ad1d_0          70 KB  conda-forge
    pexpect-4.8.0              |   py36h9f0ad1d_1          79 KB  conda-forge
    pickleshare-0.7.5          |py36h9f0ad1d_1001          13 KB  conda-forge
    pip-19.3.1                 |           py36_0         1.9 MB  conda-forge
    prometheus_client-0.8.0    |     pyh9f0ad1d_0          44 KB  conda-forge
    prompt-toolkit-3.0.6       |             py_0         235 KB  conda-forge
    ptyprocess-0.6.0           |          py_1001          15 KB  conda-forge
    pycparser-2.20             |     pyh9f0ad1d_2          94 KB  conda-forge
    pygments-2.6.1             |             py_0         683 KB  conda-forge
    pyopenssl-19.1.0           |             py_1          47 KB  conda-forge
    pyparsing-2.4.7            |     pyh9f0ad1d_0          60 KB  conda-forge
    pyrsistent-0.16.0          |   py36h8c4c3a4_0          89 KB  conda-forge
    pysocks-1.7.1              |   py36h9f0ad1d_1          27 KB  conda-forge
    python-3.6.11              |h4d41432_2_cpython        34.2 MB  conda-forge
    python-dateutil-2.8.1      |             py_0         220 KB  conda-forge
    python_abi-3.6             |          1_cp36m           4 KB  conda-forge
    pyzmq-19.0.2               |   py36h9947dbf_0         465 KB  conda-forge
    readline-8.0               |       he28a2e2_2         281 KB  conda-forge
    requests-2.24.0            |     pyh9f0ad1d_0          47 KB  conda-forge
    send2trash-1.5.0           |             py_0          12 KB  conda-forge
    setuptools-49.6.0          |   py36h9f0ad1d_0         935 KB  conda-forge
    six-1.15.0                 |     pyh9f0ad1d_0          14 KB  conda-forge
    sqlite-3.33.0              |       h4cf870e_0         1.4 MB  conda-forge
    terminado-0.8.3            |   py36h9f0ad1d_1          23 KB  conda-forge
    testpath-0.4.4             |             py_0          85 KB  conda-forge
    tk-8.6.10                  |       hed695b0_0         3.2 MB  conda-forge
    tornado-6.0.4              |   py36h8c4c3a4_1         639 KB  conda-forge
    traitlets-4.3.3            |   py36h9f0ad1d_1         133 KB  conda-forge
    urllib3-1.25.10            |             py_0          92 KB  conda-forge
    wcwidth-0.2.5              |     pyh9f0ad1d_1          33 KB  conda-forge
    webencodings-0.5.1         |             py_1          12 KB  conda-forge
    wheel-0.35.1               |     pyh9f0ad1d_0          29 KB  conda-forge
    xz-5.2.5                   |       h516909a_1         343 KB  conda-forge
    zeromq-4.3.2               |       he1b5a44_3         326 KB  conda-forge
    zipp-3.1.0                 |             py_0          10 KB  conda-forge
    zlib-1.2.11                |    h516909a_1007         106 KB  conda-forge
    ------------------------------------------------------------
                                           Total:        98.7 MB

The following NEW packages will be INSTALLED:

  _libgcc_mutex      conda-forge/linux-64::_libgcc_mutex-0.1-conda_forge
  _openmp_mutex      conda-forge/linux-64::_openmp_mutex-4.5-1_gnu
  argon2-cffi        conda-forge/linux-64::argon2-cffi-20.1.0-py36h8c4c3a4_1
  attrs              conda-forge/noarch::attrs-19.3.0-py_0
  backcall           conda-forge/noarch::backcall-0.2.0-pyh9f0ad1d_0
  backports          conda-forge/noarch::backports-1.0-py_2
  backports.functoo~ conda-forge/noarch::backports.functools_lru_cache-1.6.1-py_0
  bleach             conda-forge/noarch::bleach-3.1.5-pyh9f0ad1d_0
  brotlipy           conda-forge/linux-64::brotlipy-0.7.0-py36h8c4c3a4_1000
  ca-certificates    conda-forge/linux-64::ca-certificates-2020.6.20-hecda079_0
  certifi            conda-forge/linux-64::certifi-2020.6.20-py36h9f0ad1d_0
  cffi               conda-forge/linux-64::cffi-1.14.1-py36h0ff685e_0
  chardet            conda-forge/linux-64::chardet-3.0.4-py36h9f0ad1d_1006
  cryptography       conda-forge/linux-64::cryptography-3.0-py36h45558ae_0
  decorator          conda-forge/noarch::decorator-4.4.2-py_0
  defusedxml         conda-forge/noarch::defusedxml-0.6.0-py_0
  entrypoints        conda-forge/linux-64::entrypoints-0.3-py36h9f0ad1d_1001
  idna               conda-forge/noarch::idna-2.10-pyh9f0ad1d_0
  importlib-metadata conda-forge/linux-64::importlib-metadata-1.7.0-py36h9f0ad1d_0
  importlib_metadata conda-forge/noarch::importlib_metadata-1.7.0-0
  ipykernel          conda-forge/linux-64::ipykernel-5.3.4-py36h95af2a2_0
  ipython            conda-forge/linux-64::ipython-7.16.1-py36h95af2a2_0
  ipython_genutils   conda-forge/noarch::ipython_genutils-0.2.0-py_1
  jedi               conda-forge/linux-64::jedi-0.17.2-py36h9f0ad1d_0
  jinja2             conda-forge/noarch::jinja2-2.11.2-pyh9f0ad1d_0
  json5              conda-forge/noarch::json5-0.9.4-pyh9f0ad1d_0
  jsonschema         conda-forge/linux-64::jsonschema-3.2.0-py36h9f0ad1d_1
  jupyter_client     conda-forge/noarch::jupyter_client-6.1.6-py_0
  jupyter_core       conda-forge/linux-64::jupyter_core-4.6.3-py36h9f0ad1d_1
  jupyterlab         conda-forge/noarch::jupyterlab-2.0.1-py_0
  jupyterlab_server  conda-forge/noarch::jupyterlab_server-1.2.0-py_0
  ld_impl_linux-64   conda-forge/linux-64::ld_impl_linux-64-2.34-hc38a660_9
  libffi             conda-forge/linux-64::libffi-3.2.1-he1b5a44_1007
  libgcc-ng          conda-forge/linux-64::libgcc-ng-9.3.0-h24d8f2e_15
  libgomp            conda-forge/linux-64::libgomp-9.3.0-h24d8f2e_15
  libsodium          conda-forge/linux-64::libsodium-1.0.18-h516909a_0
  libstdcxx-ng       conda-forge/linux-64::libstdcxx-ng-9.3.0-hdf63c60_15
  markupsafe         conda-forge/linux-64::markupsafe-1.1.1-py36h8c4c3a4_1
  mistune            conda-forge/linux-64::mistune-0.8.4-py36h8c4c3a4_1001
  nbconvert          conda-forge/linux-64::nbconvert-5.6.1-py36h9f0ad1d_1
  nbformat           conda-forge/noarch::nbformat-5.0.7-py_0
  ncurses            conda-forge/linux-64::ncurses-6.2-he1b5a44_1
  notebook           conda-forge/linux-64::notebook-6.1.3-py36h9f0ad1d_0
  openssl            conda-forge/linux-64::openssl-1.1.1g-h516909a_1
  packaging          conda-forge/noarch::packaging-20.4-pyh9f0ad1d_0
  pandoc             conda-forge/linux-64::pandoc-2.10.1-h516909a_0
  pandocfilters      conda-forge/noarch::pandocfilters-1.4.2-py_1
  parso              conda-forge/noarch::parso-0.7.1-pyh9f0ad1d_0
  pexpect            conda-forge/linux-64::pexpect-4.8.0-py36h9f0ad1d_1
  pickleshare        conda-forge/linux-64::pickleshare-0.7.5-py36h9f0ad1d_1001
  pip                conda-forge/linux-64::pip-19.3.1-py36_0
  prometheus_client  conda-forge/noarch::prometheus_client-0.8.0-pyh9f0ad1d_0
  prompt-toolkit     conda-forge/noarch::prompt-toolkit-3.0.6-py_0
  ptyprocess         conda-forge/noarch::ptyprocess-0.6.0-py_1001
  pycparser          conda-forge/noarch::pycparser-2.20-pyh9f0ad1d_2
  pygments           conda-forge/noarch::pygments-2.6.1-py_0
  pyopenssl          conda-forge/noarch::pyopenssl-19.1.0-py_1
  pyparsing          conda-forge/noarch::pyparsing-2.4.7-pyh9f0ad1d_0
  pyrsistent         conda-forge/linux-64::pyrsistent-0.16.0-py36h8c4c3a4_0
  pysocks            conda-forge/linux-64::pysocks-1.7.1-py36h9f0ad1d_1
  python             conda-forge/linux-64::python-3.6.11-h4d41432_2_cpython
  python-dateutil    conda-forge/noarch::python-dateutil-2.8.1-py_0
  python_abi         conda-forge/linux-64::python_abi-3.6-1_cp36m
  pyzmq              conda-forge/linux-64::pyzmq-19.0.2-py36h9947dbf_0
  readline           conda-forge/linux-64::readline-8.0-he28a2e2_2
  requests           conda-forge/noarch::requests-2.24.0-pyh9f0ad1d_0
  send2trash         conda-forge/noarch::send2trash-1.5.0-py_0
  setuptools         conda-forge/linux-64::setuptools-49.6.0-py36h9f0ad1d_0
  six                conda-forge/noarch::six-1.15.0-pyh9f0ad1d_0
  sqlite             conda-forge/linux-64::sqlite-3.33.0-h4cf870e_0
  terminado          conda-forge/linux-64::terminado-0.8.3-py36h9f0ad1d_1
  testpath           conda-forge/noarch::testpath-0.4.4-py_0
  tk                 conda-forge/linux-64::tk-8.6.10-hed695b0_0
  tornado            conda-forge/linux-64::tornado-6.0.4-py36h8c4c3a4_1
  traitlets          conda-forge/linux-64::traitlets-4.3.3-py36h9f0ad1d_1
  urllib3            conda-forge/noarch::urllib3-1.25.10-py_0
  wcwidth            conda-forge/noarch::wcwidth-0.2.5-pyh9f0ad1d_1
  webencodings       conda-forge/noarch::webencodings-0.5.1-py_1
  wheel              conda-forge/noarch::wheel-0.35.1-pyh9f0ad1d_0
  xz                 conda-forge/linux-64::xz-5.2.5-h516909a_1
  zeromq             conda-forge/linux-64::zeromq-4.3.2-he1b5a44_3
  zipp               conda-forge/noarch::zipp-3.1.0-py_0
  zlib               conda-forge/linux-64::zlib-1.2.11-h516909a_1007


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
+ conda activate mango-build-a757f1d0-c1df-47c7-997d-2aff9d66b75f

CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.


clean_up
+ clean_up
+ set +x +v
DeprecationWarning: 'source deactivate' is deprecated. Use 'conda deactivate'.

## Package Plan ##

  environment location: /home/jenkins/.conda/envs/mango-build-a757f1d0-c1df-47c7-997d-2aff9d66b75f


The following packages will be REMOVED:

  _libgcc_mutex-0.1-conda_forge
  _openmp_mutex-4.5-1_gnu
  argon2-cffi-20.1.0-py36h8c4c3a4_1
  attrs-19.3.0-py_0
  backcall-0.2.0-pyh9f0ad1d_0
  backports-1.0-py_2
  backports.functools_lru_cache-1.6.1-py_0
  bleach-3.1.5-pyh9f0ad1d_0
  brotlipy-0.7.0-py36h8c4c3a4_1000
  ca-certificates-2020.6.20-hecda079_0
  certifi-2020.6.20-py36h9f0ad1d_0
  cffi-1.14.1-py36h0ff685e_0
  chardet-3.0.4-py36h9f0ad1d_1006
  cryptography-3.0-py36h45558ae_0
  decorator-4.4.2-py_0
  defusedxml-0.6.0-py_0
  entrypoints-0.3-py36h9f0ad1d_1001
  idna-2.10-pyh9f0ad1d_0
  importlib-metadata-1.7.0-py36h9f0ad1d_0
  importlib_metadata-1.7.0-0
  ipykernel-5.3.4-py36h95af2a2_0
  ipython-7.16.1-py36h95af2a2_0
  ipython_genutils-0.2.0-py_1
  jedi-0.17.2-py36h9f0ad1d_0
  jinja2-2.11.2-pyh9f0ad1d_0
  json5-0.9.4-pyh9f0ad1d_0
  jsonschema-3.2.0-py36h9f0ad1d_1
  jupyter_client-6.1.6-py_0
  jupyter_core-4.6.3-py36h9f0ad1d_1
  jupyterlab-2.0.1-py_0
  jupyterlab_server-1.2.0-py_0
  ld_impl_linux-64-2.34-hc38a660_9
  libffi-3.2.1-he1b5a44_1007
  libgcc-ng-9.3.0-h24d8f2e_15
  libgomp-9.3.0-h24d8f2e_15
  libsodium-1.0.18-h516909a_0
  libstdcxx-ng-9.3.0-hdf63c60_15
  markupsafe-1.1.1-py36h8c4c3a4_1
  mistune-0.8.4-py36h8c4c3a4_1001
  nbconvert-5.6.1-py36h9f0ad1d_1
  nbformat-5.0.7-py_0
  ncurses-6.2-he1b5a44_1
  notebook-6.1.3-py36h9f0ad1d_0
  openssl-1.1.1g-h516909a_1
  packaging-20.4-pyh9f0ad1d_0
  pandoc-2.10.1-h516909a_0
  pandocfilters-1.4.2-py_1
  parso-0.7.1-pyh9f0ad1d_0
  pexpect-4.8.0-py36h9f0ad1d_1
  pickleshare-0.7.5-py36h9f0ad1d_1001
  pip-19.3.1-py36_0
  prometheus_client-0.8.0-pyh9f0ad1d_0
  prompt-toolkit-3.0.6-py_0
  ptyprocess-0.6.0-py_1001
  pycparser-2.20-pyh9f0ad1d_2
  pygments-2.6.1-py_0
  pyopenssl-19.1.0-py_1
  pyparsing-2.4.7-pyh9f0ad1d_0
  pyrsistent-0.16.0-py36h8c4c3a4_0
  pysocks-1.7.1-py36h9f0ad1d_1
  python-3.6.11-h4d41432_2_cpython
  python-dateutil-2.8.1-py_0
  python_abi-3.6-1_cp36m
  pyzmq-19.0.2-py36h9947dbf_0
  readline-8.0-he28a2e2_2
  requests-2.24.0-pyh9f0ad1d_0
  send2trash-1.5.0-py_0
  setuptools-49.6.0-py36h9f0ad1d_0
  six-1.15.0-pyh9f0ad1d_0
  sqlite-3.33.0-h4cf870e_0
  terminado-0.8.3-py36h9f0ad1d_1
  testpath-0.4.4-py_0
  tk-8.6.10-hed695b0_0
  tornado-6.0.4-py36h8c4c3a4_1
  traitlets-4.3.3-py36h9f0ad1d_1
  urllib3-1.25.10-py_0
  wcwidth-0.2.5-pyh9f0ad1d_1
  webencodings-0.5.1-py_1
  wheel-0.35.1-pyh9f0ad1d_0
  xz-5.2.5-h516909a_1
  zeromq-4.3.2-he1b5a44_3
  zipp-3.1.0-py_0
  zlib-1.2.11-h516909a_1007


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done

Remove all packages in environment /home/jenkins/.conda/envs/mango-build-a757f1d0-c1df-47c7-997d-2aff9d66b75f:

Build step 'Execute shell' marked build as failure
Finished: FAILURE