SuccessConsole Output

Started by upstream project "quinine" build number 3926
originally caused by:
 Started by upstream project "ADAM" build number 4191
 originally caused by:
  Started by timer
[EnvInject] - Loading node environment variables.
Building remotely on amp-jenkins-worker-01 (spark-packaging spark-compile spark-experimental-docker spark-release spark-docs centos) in workspace /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos
 > git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/bigdatagenomics/quinine.git # timeout=10
Fetching upstream changes from https://github.com/bigdatagenomics/quinine.git
 > git --version # timeout=10
 > git fetch --tags --progress https://github.com/bigdatagenomics/quinine.git +refs/heads/*:refs/remotes/origin/*
Checking out Revision 31b91e2d60ebedf732f8cf34d3dc1bf78bb428af (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 31b91e2d60ebedf732f8cf34d3dc1bf78bb428af
 > git rev-list 31b91e2d60ebedf732f8cf34d3dc1bf78bb428af # timeout=10
[centos] $ /home/jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1/bin/mvn -Dlabel=centos -Dhadoop.version=1.0.4 clean package
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.quinine:quinine-core_2.10:jar:0.0.3-SNAPSHOT
[WARNING] 'dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 370, column 25
[WARNING] 'dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 374, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 370, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 374, column 25
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.quinine:quinine-cli_2.10:jar:0.0.3-SNAPSHOT
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 370, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 374, column 25
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.quinine:quinine-parent_2.10:pom:0.0.3-SNAPSHOT
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 370, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 374, column 25
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Build Order:
[INFO] 
[INFO] quinine
[INFO] quinine: Core
[INFO] quinine: CLI
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building quinine 0.0.3-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.6.1:clean (default-clean) @ quinine-parent_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ quinine-parent_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ quinine-parent_2.10 ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ quinine-parent_2.10 ---
[INFO] Modified 0 of 54 .scala files
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ quinine-parent_2.10 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ quinine-parent_2.10 ---
[INFO] No sources to compile
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building quinine: Core 0.0.3-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.6.1:clean (default-clean) @ quinine-core_2.10 ---
[INFO] Deleting /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ quinine-core_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ quinine-core_2.10 ---
[INFO] 
[INFO] --- build-helper-maven-plugin:1.9.1:add-source (add-source) @ quinine-core_2.10 ---
[INFO] Source directory: /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/main/scala added.
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ quinine-core_2.10 ---
[INFO] Modified 0 of 41 .scala files
[INFO] 
[INFO] --- maven-resources-plugin:2.7:resources (default-resources) @ quinine-core_2.10 ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/main/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ quinine-core_2.10 ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.4
[WARNING]  com.twitter:chill_2.10:0.5.0 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-remote_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-actor_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-slf4j_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  org.apache.spark:spark-core_2.10:1.6.1 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-jackson_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-ast_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.0
[WARNING] Multiple versions of scala libraries detected!
[INFO] /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/main/scala:-1: info: compiling
[INFO] Compiling 24 source files to /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/classes at 1551417220850
[WARNING] warning: there were 2 feature warning(s); re-run with -feature for details
[WARNING] one warning found
[INFO] prepare-compile in 0 s
[INFO] compile in 13 s
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ quinine-core_2.10 ---
[INFO] Nothing to compile - all classes are up to date
[INFO] 
[INFO] --- build-helper-maven-plugin:1.9.1:add-test-source (add-test-source) @ quinine-core_2.10 ---
[INFO] Test Source directory: /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/test/scala added.
[INFO] 
[INFO] --- maven-resources-plugin:2.7:testResources (default-testResources) @ quinine-core_2.10 ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ quinine-core_2.10 ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.4
[WARNING]  com.twitter:chill_2.10:0.5.0 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-remote_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-actor_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-slf4j_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  org.apache.spark:spark-core_2.10:1.6.1 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-jackson_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-ast_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.0
[WARNING] Multiple versions of scala libraries detected!
[INFO] /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/test/scala:-1: info: compiling
[INFO] Compiling 17 source files to /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes at 1551417234780
[INFO] prepare-compile in 0 s
[INFO] compile in 15 s
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:testCompile (default-testCompile) @ quinine-core_2.10 ---
[INFO] Nothing to compile - all classes are up to date
[INFO] 
[INFO] --- maven-surefire-plugin:2.18.1:test (default-test) @ quinine-core_2.10 ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- scalatest-maven-plugin:1.0:test (test) @ quinine-core_2.10 ---
Discovery starting.
Discovery completed in 522 milliseconds.
Run starting. Expected test count is: 74
RNASeqPanelStatsSuite:
19/02/28 21:14:11 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:11 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:11 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:11 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:12 INFO util.Utils: Successfully started service 'sparkDriver' on port 50373.
19/02/28 21:14:12 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:12 INFO Remoting: Starting remoting
19/02/28 21:14:12 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@192.168.10.21:50374]
19/02/28 21:14:12 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 50374.
19/02/28 21:14:12 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:12 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:12 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-ba163027-d53a-40cc-8746-28eb19abb997
19/02/28 21:14:12 INFO storage.MemoryStore: MemoryStore started with capacity 511.1 MB
19/02/28 21:14:12 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:13 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:13 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 42549.
19/02/28 21:14:13 INFO netty.NettyBlockTransferService: Server created on 42549
19/02/28 21:14:13 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:13 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:42549 with 511.1 MB RAM, BlockManagerId(driver, localhost, 42549)
19/02/28 21:14:13 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:13 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/02/28 21:14:13 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/02/28 21:14:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/02/28 21:14:13 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:13 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/02/28 21:14:13 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/02/28 21:14:13 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/02/28 21:14:13 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:42549 (size: 1324.0 B, free: 511.1 MB)
19/02/28 21:14:13 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79)
19/02/28 21:14:13 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2023 bytes)
19/02/28 21:14:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:13 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:13 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:13 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:13 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:13 INFO spark.CacheManager: Partition rdd_0_3 not found, computing it
19/02/28 21:14:13 INFO spark.CacheManager: Partition rdd_0_2 not found, computing it
19/02/28 21:14:13 INFO spark.CacheManager: Partition rdd_0_1 not found, computing it
19/02/28 21:14:13 INFO spark.CacheManager: Partition rdd_0_0 not found, computing it
19/02/28 21:14:13 INFO storage.MemoryStore: Block rdd_0_0 stored as values in memory (estimated size 16.0 B, free 3.4 KB)
19/02/28 21:14:13 INFO storage.BlockManagerInfo: Added rdd_0_0 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:13 INFO storage.MemoryStore: Block rdd_0_2 stored as values in memory (estimated size 352.0 B, free 3.7 KB)
19/02/28 21:14:13 INFO storage.MemoryStore: Block rdd_0_1 stored as values in memory (estimated size 352.0 B, free 4.0 KB)
19/02/28 21:14:13 INFO storage.BlockManagerInfo: Added rdd_0_2 in memory on localhost:42549 (size: 352.0 B, free: 511.1 MB)
19/02/28 21:14:13 INFO storage.MemoryStore: Block rdd_0_3 stored as values in memory (estimated size 352.0 B, free 4.4 KB)
19/02/28 21:14:13 INFO storage.BlockManagerInfo: Added rdd_0_1 in memory on localhost:42549 (size: 352.0 B, free: 511.1 MB)
19/02/28 21:14:13 INFO storage.BlockManagerInfo: Added rdd_0_3 in memory on localhost:42549 (size: 352.0 B, free: 511.1 MB)
19/02/28 21:14:13 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1488 bytes result sent to driver
19/02/28 21:14:13 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1548 bytes result sent to driver
19/02/28 21:14:13 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1548 bytes result sent to driver
19/02/28 21:14:13 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1548 bytes result sent to driver
19/02/28 21:14:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 125 ms on localhost (1/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 111 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 92 ms on localhost (3/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 101 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.152 s
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.468916 s
19/02/28 21:14:14 INFO spark.SparkContext: Starting job: collect at RightOuterJoin.scala:77
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at RightOuterJoin.scala:75)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Got job 1 (collect at RightOuterJoin.scala:77) with 4 output partitions
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (collect at RightOuterJoin.scala:77)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.0 KB, free 8.4 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.1 KB, free 10.5 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:42549 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:42549 in memory (size: 1324.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.ContextCleaner: Cleaned accumulator 1
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_1_2 not found, computing it
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_1_2 stored as values in memory (estimated size 16.0 B, free 7.2 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_1_2 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_1_1 not found, computing it
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_1_0 not found, computing it
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_1_3 not found, computing it
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_1_1 stored as values in memory (estimated size 16.0 B, free 7.2 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_1_1 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_1_0 stored as values in memory (estimated size 16.0 B, free 7.2 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_1_0 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_1_3 stored as values in memory (estimated size 4.7 KB, free 11.9 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_1_3 in memory on localhost:42549 (size: 4.7 KB, free: 511.1 MB)
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1670 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1670 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1670 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 92 ms on localhost (1/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 83 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 76 ms on localhost (3/4)
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1670 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 97 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at RightOuterJoin.scala:75) finished in 0.121 s
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:14 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.8 KB, free 16.7 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 19.1 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:42549 (size: 2.5 KB, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1228 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 82 ms on localhost (1/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 78 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 83 ms on localhost (3/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 87 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ResultStage 2 (collect at RightOuterJoin.scala:77) finished in 0.096 s
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Job 1 finished: collect at RightOuterJoin.scala:77, took 0.301211 s
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 216.0 B, free 19.4 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 124.0 B, free 19.5 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:42549 (size: 124.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 3 from broadcast at RightOuterJoin.scala:86
19/02/28 21:14:14 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Registering RDD 9 (map at RightOuterJoin.scala:90)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at RightOuterJoin.scala:94)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Got job 2 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.4 KB, free 22.9 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2039.0 B, free 24.8 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:42549 (size: 2039.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.7 KB, free 28.5 KB)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 30.6 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:42549 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_0_0 locally
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 104 ms on localhost (1/4)
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_0_1 locally
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 99 ms on localhost (2/4)
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_0_2 locally
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 122 ms on localhost (3/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 114 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (map at RightOuterJoin.scala:90) finished in 0.141 s
19/02/28 21:14:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:14 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 66 ms on localhost (1/4)
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_0_3 locally
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 76 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 68 ms on localhost (3/4)
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 73 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (flatMap at RightOuterJoin.scala:94) finished in 0.159 s
19/02/28 21:14:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:14 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.8 KB, free 34.5 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2047.0 B, free 36.5 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:42549 (size: 2047.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 21)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 20)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 22)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 23)
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_14_3 not found, computing it
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_14_1 not found, computing it
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_14_0 not found, computing it
19/02/28 21:14:14 INFO spark.CacheManager: Partition rdd_14_2 not found, computing it
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_14_3 stored as values in memory (estimated size 16.0 B, free 36.5 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_14_3 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_14_2 stored as values in memory (estimated size 16.0 B, free 36.5 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_14_0 stored as values in memory (estimated size 16.0 B, free 36.5 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_14_2 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_14_0 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 23). 1704 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 23) in 45 ms on localhost (1/4)
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 22). 1704 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 20). 1704 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 22) in 55 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 20) in 61 ms on localhost (3/4)
19/02/28 21:14:14 INFO storage.MemoryStore: Block rdd_14_1 stored as values in memory (estimated size 5.7 KB, free 42.2 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added rdd_14_1 in memory on localhost:42549 (size: 5.7 KB, free: 511.1 MB)
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 21). 1767 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.085 s
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 21) in 81 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Job 2 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.317088 s
19/02/28 21:14:14 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:43
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Got job 3 (count at TranscriptCounts.scala:43) with 4 output partitions
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at TranscriptCounts.scala:43)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 1808.0 B, free 44.0 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1186.0 B, free 45.1 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:42549 (size: 1186.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 24)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 25)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 26)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 27)
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 24). 2057 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 25). 2057 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 26). 2057 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 27). 2057 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 24) in 45 ms on localhost (1/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 25) in 33 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 26) in 31 ms on localhost (3/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 27) in 28 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ResultStage 6 (count at TranscriptCounts.scala:43) finished in 0.051 s
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Job 3 finished: count at TranscriptCounts.scala:43, took 0.065104 s
19/02/28 21:14:14 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:51
19/02/28 21:14:14 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 162 bytes
19/02/28 21:14:14 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Registering RDD 19 (distinct at TranscriptCounts.scala:50)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Got job 4 (count at TranscriptCounts.scala:51) with 4 output partitions
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (count at TranscriptCounts.scala:51)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 9)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.0 KB, free 49.1 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.1 KB, free 51.2 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:42549 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 30)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 31)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 29)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 28)
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_14_3 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_14_2 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_14_1 locally
19/02/28 21:14:14 INFO storage.BlockManager: Found block rdd_14_0 locally
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 30). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 31). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 28). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 29). 2240 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 31) in 34 ms on localhost (1/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 28) in 37 ms on localhost (2/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 30) in 36 ms on localhost (3/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 29) in 39 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ShuffleMapStage 9 (distinct at TranscriptCounts.scala:50) finished in 0.041 s
19/02/28 21:14:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:14 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 10)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.1 KB, free 54.3 KB)
19/02/28 21:14:14 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1856.0 B, free 56.1 KB)
19/02/28 21:14:14 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:42549 (size: 1856.0 B, free: 511.1 MB)
19/02/28 21:14:14 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50)
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 32, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 33, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:14 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 35)
19/02/28 21:14:14 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 34)
19/02/28 21:14:14 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 32)
19/02/28 21:14:14 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 33)
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:14 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 34). 1123 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 35). 1123 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 34) in 18 ms on localhost (1/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 35) in 18 ms on localhost (2/4)
19/02/28 21:14:14 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 33). 1123 bytes result sent to driver
19/02/28 21:14:14 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 32). 1123 bytes result sent to driver
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 33) in 25 ms on localhost (3/4)
19/02/28 21:14:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 32) in 27 ms on localhost (4/4)
19/02/28 21:14:14 INFO scheduler.DAGScheduler: ResultStage 10 (count at TranscriptCounts.scala:51) finished in 0.028 s
19/02/28 21:14:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/02/28 21:14:14 INFO scheduler.DAGScheduler: Job 4 finished: count at TranscriptCounts.scala:51, took 0.107485 s
19/02/28 21:14:14 INFO rdd.ParallelCollectionRDD: Removing RDD 0 from persistence list
19/02/28 21:14:14 INFO storage.BlockManager: Removing RDD 0
19/02/28 21:14:15 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 28 (keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Got job 5 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 3
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 12 (collect at BroadcastRegionJoin.scala:100)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 11)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 11)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:42549 in memory (size: 1856.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 9
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:42549 in memory (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 8
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.2 KB, free 48.3 KB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:42549 in memory (size: 1186.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 7
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:42549 in memory (size: 2047.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 6
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:42549 in memory (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.2 KB, free 39.6 KB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 5
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:42549 (size: 2.2 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:42549 in memory (size: 2039.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 4 tasks
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 4
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:42549 in memory (size: 2.5 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:42549 in memory (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned accumulator 2
19/02/28 21:14:15 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 11.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 38)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 36)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 11.0 (TID 39)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 37)
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 38). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 36). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 37). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 38) in 21 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 36) in 32 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 37) in 29 ms on localhost (3/4)
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 11.0 (TID 39). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 11.0 (TID 39) in 34 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ShuffleMapStage 11 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.044 s
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:15 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 12)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 5.0 KB, free 22.2 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.5 KB, free 24.7 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:42549 (size: 2.5 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 40, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 41, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 42, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 43, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 40)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 43)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 41)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 42)
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 43). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 40). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 43) in 17 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 40) in 21 ms on localhost (2/4)
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 41). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 42). 1228 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 41) in 26 ms on localhost (3/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 42) in 27 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ResultStage 12 (collect at BroadcastRegionJoin.scala:100) finished in 0.029 s
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Job 5 finished: collect at BroadcastRegionJoin.scala:100, took 0.105543 s
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 216.0 B, free 24.9 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 124.0 B, free 25.0 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:42549 (size: 124.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 12 from broadcast at BroadcastRegionJoin.scala:109
19/02/28 21:14:15 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 22 (flatMap at ReadCoverage.scala:59)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 32 (flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 30 (map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 39 (map at CoverageStats.scala:172)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Got job 6 (collect at CoverageStats.scala:174) with 4 output partitions
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (collect at CoverageStats.scala:174)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 2.7 KB, free 27.8 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 1677.0 B, free 29.4 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:42549 (size: 1677.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 3.6 KB, free 33.0 KB)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.1 KB, free 35.1 KB)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:42549 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 44)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 47)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 46)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 45)
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 44). 1090 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 48)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 44) in 34 ms on localhost (1/4)
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 48). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 49)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 48) in 20 ms on localhost (1/4)
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 49). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 50)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 49) in 18 ms on localhost (2/4)
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 50). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 15.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 15.0 (TID 51)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 50) in 20 ms on localhost (3/4)
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 15.0 (TID 51). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 15.0 (TID 51) in 26 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ShuffleMapStage 15 (map at BroadcastRegionJoin.scala:113) finished in 0.078 s
19/02/28 21:14:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:15 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 13)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 45). 1090 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 47). 1090 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 46). 1090 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 47) in 123 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 45) in 130 ms on localhost (3/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ShuffleMapStage 13 (flatMap at ReadCoverage.scala:59) finished in 0.136 s
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 46) in 129 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:15 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.3 KB, free 39.4 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.4 KB, free 41.8 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:42549 (size: 2.4 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 14.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 14.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 14.0 (TID 53, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 14.0 (TID 54, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 14.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 14.0 (TID 52)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 14.0 (TID 55)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 14.0 (TID 54)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 14.0 (TID 53)
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_23_0 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_23_1 not found, computing it
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_23_3 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_23_2 not found, computing it
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_23_1 stored as values in memory (estimated size 16.0 B, free 41.8 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_23_1 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_23_3 stored as values in memory (estimated size 16.0 B, free 41.9 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_23_3 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 14.0 (TID 54). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 14.0 (TID 54) in 18 ms on localhost (1/4)
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 14.0 (TID 55). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 14.0 (TID 55) in 21 ms on localhost (2/4)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_23_0 stored as values in memory (estimated size 17.1 KB, free 59.0 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_23_0 in memory on localhost:42549 (size: 17.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_23_2 stored as values in memory (estimated size 17.1 KB, free 76.1 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_23_2 in memory on localhost:42549 (size: 17.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 14.0 (TID 52). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 14.0 (TID 53). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 14.0 (TID 53) in 126 ms on localhost (3/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 14.0 (TID 52) in 128 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ShuffleMapStage 14 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.129 s
19/02/28 21:14:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 14.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.1 KB, free 80.2 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.2 KB, free 82.3 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:42549 (size: 2.2 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 57)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 59)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 58)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 56)
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_37_0 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_37_2 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_37_1 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_37_3 not found, computing it
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_37_0 stored as values in memory (estimated size 16.0 B, free 82.4 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_37_0 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_37_3 stored as values in memory (estimated size 16.0 B, free 82.4 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_37_3 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_37_2 stored as values in memory (estimated size 16.0 B, free 82.4 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_37_2 in memory on localhost:42549 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 56). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 59). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 58). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 56) in 27 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 59) in 27 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 58) in 28 ms on localhost (3/4)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_37_1 stored as values in memory (estimated size 45.8 KB, free 128.2 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_37_1 in memory on localhost:42549 (size: 45.8 KB, free: 511.0 MB)
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 57). 1886 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 57) in 98 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (map at CoverageStats.scala:172) finished in 0.099 s
19/02/28 21:14:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 2.5 KB, free 130.8 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 1554.0 B, free 132.3 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:42549 (size: 1554.0 B, free: 511.0 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 17.0 (TID 60, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 61, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 17.0 (TID 62, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 17.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 61)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 17.0 (TID 63)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 17.0 (TID 60)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 17.0 (TID 62)
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 17.0 (TID 63). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 61). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 17.0 (TID 62). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 17.0 (TID 60). 1131 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 17.0 (TID 63) in 11 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 17.0 (TID 62) in 13 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 61) in 13 ms on localhost (3/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 17.0 (TID 60) in 16 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ResultStage 17 (collect at CoverageStats.scala:174) finished in 0.016 s
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Job 6 finished: collect at CoverageStats.scala:174, took 0.429856 s
19/02/28 21:14:15 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/02/28 21:14:15 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 8 is 158 bytes
19/02/28 21:14:15 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 161 bytes
19/02/28 21:14:15 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 42 (map at CoverageStats.scala:172)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Got job 7 (collect at CoverageStats.scala:174) with 4 output partitions
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (collect at CoverageStats.scala:174)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 21)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 21)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.2 KB, free 136.5 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.2 KB, free 138.7 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:42549 (size: 2.2 KB, free: 511.0 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 21.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 21.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 21.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 64)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 21.0 (TID 67)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 21.0 (TID 65)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 21.0 (TID 66)
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_37_3 locally
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_37_1 locally
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_37_0 locally
19/02/28 21:14:15 INFO storage.BlockManager: Found block rdd_37_2 locally
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 21.0 (TID 67). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 64). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 21.0 (TID 66). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 21.0 (TID 67) in 17 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 64) in 19 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 21.0 (TID 66) in 18 ms on localhost (3/4)
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 21.0 (TID 65). 2240 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 21.0 (TID 65) in 27 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ShuffleMapStage 21 (map at CoverageStats.scala:172) finished in 0.028 s
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:15 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 22)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 2.5 KB, free 141.2 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 1554.0 B, free 142.7 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:42549 (size: 1554.0 B, free: 511.0 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 68, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 69, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 69)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 71)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 68)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 70)
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 69). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 71). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 70). 1124 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 68). 1131 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 71) in 14 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 69) in 15 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 70) in 14 ms on localhost (3/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 68) in 16 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ResultStage 22 (collect at CoverageStats.scala:174) finished in 0.017 s
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Job 7 finished: collect at CoverageStats.scala:174, took 0.065790 s
19/02/28 21:14:15 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:15 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:15 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:15 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:15 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:15 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:15 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
- single transcript, with reads at the start, middle, and end
19/02/28 21:14:15 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:15 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:15 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:15 INFO util.Utils: Successfully started service 'sparkDriver' on port 59376.
19/02/28 21:14:15 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:15 INFO Remoting: Starting remoting
19/02/28 21:14:15 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59377]
19/02/28 21:14:15 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59377.
19/02/28 21:14:15 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:15 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:15 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-975584fc-94f7-419d-85af-96f463a48143
19/02/28 21:14:15 INFO storage.MemoryStore: MemoryStore started with capacity 511.1 MB
19/02/28 21:14:15 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:15 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:15 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 34658.
19/02/28 21:14:15 INFO netty.NettyBlockTransferService: Server created on 34658
19/02/28 21:14:15 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:15 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:34658 with 511.1 MB RAM, BlockManagerId(driver, localhost, 34658)
19/02/28 21:14:15 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:15 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:34658 (size: 1324.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2157 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_0_3 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_0_1 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_0_0 not found, computing it
19/02/28 21:14:15 INFO spark.CacheManager: Partition rdd_0_2 not found, computing it
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_0_3 stored as values in memory (estimated size 632.0 B, free 4.0 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_0_2 stored as values in memory (estimated size 352.0 B, free 4.3 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_0_3 in memory on localhost:34658 (size: 632.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_0_1 stored as values in memory (estimated size 352.0 B, free 4.6 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_0_2 in memory on localhost:34658 (size: 352.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block rdd_0_0 stored as values in memory (estimated size 352.0 B, free 5.0 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_0_1 in memory on localhost:34658 (size: 352.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added rdd_0_0 in memory on localhost:34658 (size: 352.0 B, free: 511.1 MB)
19/02/28 21:14:15 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1548 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1548 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1548 bytes result sent to driver
19/02/28 21:14:15 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1548 bytes result sent to driver
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 21 ms on localhost (1/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 20 ms on localhost (2/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 24 ms on localhost (3/4)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 27 ms on localhost (4/4)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.027 s
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.059634 s
19/02/28 21:14:15 INFO spark.SparkContext: Starting job: collect at RightOuterJoin.scala:77
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at RightOuterJoin.scala:75)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Got job 1 (collect at RightOuterJoin.scala:77) with 4 output partitions
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (collect at RightOuterJoin.scala:77)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75), which has no missing parents
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.0 KB, free 9.0 KB)
19/02/28 21:14:15 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.1 KB, free 11.1 KB)
19/02/28 21:14:15 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:34658 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:15 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75)
19/02/28 21:14:15 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:15 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:15 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:15 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:15 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_0 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_2 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_3 not found, computing it
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_0 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_1 not found, computing it
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_0 in memory on localhost:34658 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_2 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_2 in memory on localhost:34658 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_3 stored as values in memory (estimated size 4.7 KB, free 15.9 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_3 in memory on localhost:34658 (size: 4.7 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_1 stored as values in memory (estimated size 4.7 KB, free 20.6 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_1 in memory on localhost:34658 (size: 4.7 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 26 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 20 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 23 ms on localhost (3/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 36 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at RightOuterJoin.scala:75) finished in 0.038 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.8 KB, free 25.3 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 27.8 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:34658 (size: 2.5 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 11 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 14 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1239 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 17 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 18 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 2 (collect at RightOuterJoin.scala:77) finished in 0.019 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 1 finished: collect at RightOuterJoin.scala:77, took 0.079246 s
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 232.0 B, free 28.0 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 128.0 B, free 28.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:34658 (size: 128.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 3 from broadcast at RightOuterJoin.scala:86
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 9 (map at RightOuterJoin.scala:90)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at RightOuterJoin.scala:94)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 2 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.4 KB, free 31.5 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2039.0 B, free 33.5 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:34658 (size: 2039.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94), which has no missing parents
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.7 KB, free 37.2 KB)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 39.3 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:34658 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 19 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 25 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_0_0 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_0_1 locally
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_0_2 locally
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 25 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 33 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (map at RightOuterJoin.scala:90) finished in 0.036 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_0_3 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 20 ms on localhost (1/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 25 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 20 ms on localhost (3/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 22 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (flatMap at RightOuterJoin.scala:94) finished in 0.044 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.8 KB, free 43.1 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2047.0 B, free 45.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:34658 (size: 2047.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 20)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 23)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 21)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 22)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_14_1 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_14_0 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_14_2 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_14_3 not found, computing it
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_14_3 stored as values in memory (estimated size 16.0 B, free 45.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_14_3 in memory on localhost:34658 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_14_2 stored as values in memory (estimated size 16.0 B, free 45.2 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_14_2 in memory on localhost:34658 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 23). 1704 bytes result sent to driver
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_14_1 stored as values in memory (estimated size 6.0 KB, free 51.2 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_14_1 in memory on localhost:34658 (size: 6.0 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_14_0 stored as values in memory (estimated size 392.0 B, free 51.5 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_14_0 in memory on localhost:34658 (size: 392.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 23) in 16 ms on localhost (1/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 22). 1704 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 21). 1767 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 20). 1767 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 22) in 20 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 21) in 22 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 20) in 22 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.023 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 2 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.104403 s
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:43
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 3 (count at TranscriptCounts.scala:43) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at TranscriptCounts.scala:43)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 1808.0 B, free 53.3 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1186.0 B, free 54.5 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:34658 (size: 1186.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 26)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 25)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 27)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 24)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 26). 2057 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 24). 2057 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 25). 2057 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 27). 2057 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 26) in 13 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 25) in 17 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 27) in 13 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 6 (count at TranscriptCounts.scala:43) finished in 0.023 s
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 24) in 23 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 3 finished: count at TranscriptCounts.scala:43, took 0.036144 s
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:51
19/02/28 21:14:16 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/02/28 21:14:16 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 165 bytes
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 19 (distinct at TranscriptCounts.scala:50)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 4 (count at TranscriptCounts.scala:51) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (count at TranscriptCounts.scala:51)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 9)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.0 KB, free 58.4 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.1 KB, free 60.5 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:34658 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 28)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 30)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 31)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 29)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_14_3 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_14_2 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_14_1 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_14_0 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 30). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 31). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 29). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 28). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 30) in 13 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 29) in 13 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 31) in 12 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 9 (distinct at TranscriptCounts.scala:50) finished in 0.017 s
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 28) in 17 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 10)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.1 KB, free 63.6 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1856.0 B, free 65.5 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:34658 (size: 1856.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 32, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 33, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 33)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 35)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 34)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 32)
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 32). 1123 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 33). 1123 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 32) in 15 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 33) in 16 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 35). 1123 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 34). 1123 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 35) in 19 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 34) in 22 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 10 (count at TranscriptCounts.scala:51) finished in 0.023 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 4 finished: count at TranscriptCounts.scala:51, took 0.059624 s
19/02/28 21:14:16 INFO rdd.ParallelCollectionRDD: Removing RDD 0 from persistence list
19/02/28 21:14:16 INFO storage.BlockManager: Removing RDD 0
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 28 (keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 5 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 12 (collect at BroadcastRegionJoin.scala:100)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 11)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 11)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.2 KB, free 68.0 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.2 KB, free 70.2 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:34658 (size: 2.2 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 11.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 36)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 38)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 37)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 11.0 (TID 39)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 36). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 38). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 36) in 17 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 38) in 14 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 37). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 11.0 (TID 39). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 37) in 22 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 11.0 (TID 39) in 21 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 11 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.027 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 12)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 5.0 KB, free 75.2 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.5 KB, free 77.7 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:34658 (size: 2.5 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 40, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 41, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 42, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 43, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 41)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 42)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 40)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 43)
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 41). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 40). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 40) in 12 ms on localhost (1/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 43). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 41) in 12 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 42). 1239 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 43) in 13 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 42) in 16 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 12 (collect at BroadcastRegionJoin.scala:100) finished in 0.017 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 5 finished: collect at BroadcastRegionJoin.scala:100, took 0.064128 s
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 232.0 B, free 77.9 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 128.0 B, free 78.0 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:34658 (size: 128.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 12 from broadcast at BroadcastRegionJoin.scala:109
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 22 (flatMap at ReadCoverage.scala:59)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 32 (flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 30 (map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 39 (map at CoverageStats.scala:172)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 6 (collect at CoverageStats.scala:174) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (collect at CoverageStats.scala:174)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 2.7 KB, free 80.8 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 1677.0 B, free 82.4 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:34658 (size: 1677.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 3.6 KB, free 86.0 KB)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.1 KB, free 88.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:34658 (size: 2.1 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 47)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 45)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 46)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 44)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 44). 1090 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 48)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 44) in 31 ms on localhost (1/4)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 45). 1090 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 48). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 49)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 46). 1090 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 50)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 45) in 36 ms on localhost (2/4)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 47). 1090 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 15.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 15.0 (TID 51)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 48) in 13 ms on localhost (1/4)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 47) in 36 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 46) in 39 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 13 (flatMap at ReadCoverage.scala:59) finished in 0.044 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 15)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 50). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.3 KB, free 92.4 KB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 49). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 50) in 13 ms on localhost (2/4)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.4 KB, free 94.8 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:34658 (size: 2.4 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 14.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 49) in 18 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 14.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 14.0 (TID 53, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 14.0 (TID 54, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 14.0 (TID 53)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 14.0 (TID 54)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 14.0 (TID 52)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 15.0 (TID 51). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 14.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 14.0 (TID 55)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_23_2 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_23_1 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_23_0 not found, computing it
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_23_3 not found, computing it
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 15.0 (TID 51) in 17 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 15 (map at BroadcastRegionJoin.scala:113) finished in 0.044 s
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 14)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_23_1 stored as values in memory (estimated size 16.0 B, free 94.8 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_23_1 in memory on localhost:34658 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_23_3 stored as values in memory (estimated size 16.0 B, free 94.9 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_23_3 in memory on localhost:34658 (size: 16.0 B, free: 511.1 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 14.0 (TID 54). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 14.0 (TID 55). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 14.0 (TID 54) in 11 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 14.0 (TID 55) in 11 ms on localhost (2/4)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_23_2 stored as values in memory (estimated size 22.8 KB, free 117.6 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_23_2 in memory on localhost:34658 (size: 22.8 KB, free: 511.1 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_23_0 stored as values in memory (estimated size 22.8 KB, free 140.4 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_23_0 in memory on localhost:34658 (size: 22.8 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 14.0 (TID 53). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 14.0 (TID 52). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 14.0 (TID 53) in 62 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 14.0 (TID 52) in 63 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 14.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 14 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.064 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.1 KB, free 144.5 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.2 KB, free 146.7 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:34658 (size: 2.2 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 58)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 59)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 57)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 56)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_37_0 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_37_2 not found, computing it
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_37_3 not found, computing it
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_37_1 not found, computing it
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_37_0 stored as values in memory (estimated size 16.0 B, free 146.7 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_37_0 in memory on localhost:34658 (size: 16.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_37_3 stored as values in memory (estimated size 16.0 B, free 146.7 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_37_2 stored as values in memory (estimated size 16.0 B, free 146.7 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_37_3 in memory on localhost:34658 (size: 16.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_37_2 in memory on localhost:34658 (size: 16.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 56). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 59). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 58). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 56) in 17 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 58) in 17 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 59) in 18 ms on localhost (3/4)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_37_1 stored as values in memory (estimated size 45.8 KB, free 192.6 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_37_1 in memory on localhost:34658 (size: 45.8 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 57). 1886 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 57) in 66 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (map at CoverageStats.scala:172) finished in 0.066 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 2.5 KB, free 195.1 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 1554.0 B, free 196.6 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:34658 (size: 1554.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 17.0 (TID 60, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 17.0 (TID 61, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 62, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 17.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 17.0 (TID 61)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 62)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 17.0 (TID 60)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 17.0 (TID 63)
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 17.0 (TID 63). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 17.0 (TID 63) in 10 ms on localhost (1/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 62). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 17.0 (TID 61). 1131 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 17.0 (TID 60). 1131 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 62) in 14 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 17.0 (TID 60) in 16 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 17.0 (TID 61) in 15 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 17 (collect at CoverageStats.scala:174) finished in 0.017 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 6 finished: collect at CoverageStats.scala:174, took 0.230221 s
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/02/28 21:14:16 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 8 is 159 bytes
19/02/28 21:14:16 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 161 bytes
19/02/28 21:14:16 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 161 bytes
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 42 (map at CoverageStats.scala:172)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 7 (collect at CoverageStats.scala:174) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (collect at CoverageStats.scala:174)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 21)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 21)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.2 KB, free 200.9 KB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 19
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.2 KB, free 203.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:34658 (size: 2.2 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_17_piece0 on localhost:34658 in memory (size: 1554.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 4 tasks
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 34
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_16_piece0 on localhost:34658 in memory (size: 2.2 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 33
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 21.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_15_piece0 on localhost:34658 in memory (size: 2.4 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 21.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 32
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 21.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 64)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 21.0 (TID 67)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 21.0 (TID 66)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 21.0 (TID 65)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:34658 in memory (size: 2.1 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 31
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_37_3 locally
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:34658 in memory (size: 1677.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_37_2 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_37_0 locally
19/02/28 21:14:16 INFO storage.BlockManager: Found block rdd_37_1 locally
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 30
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned shuffle 7
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:34658 in memory (size: 2.5 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 29
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:34658 in memory (size: 2.2 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 28
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned shuffle 4
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:34658 in memory (size: 1856.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 21.0 (TID 67). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 27
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 21.0 (TID 66). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:34658 in memory (size: 2.1 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 26
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 64). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 21.0 (TID 67) in 9 ms on localhost (1/4)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:34658 in memory (size: 1186.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 25
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:34658 in memory (size: 2047.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 21.0 (TID 66) in 10 ms on localhost (2/4)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 24
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 64) in 11 ms on localhost (3/4)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:34658 in memory (size: 2.1 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 23
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:34658 in memory (size: 2039.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 22
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:34658 in memory (size: 2.5 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 21
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:34658 in memory (size: 2.1 KB, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned accumulator 20
19/02/28 21:14:16 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:34658 in memory (size: 1324.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 21.0 (TID 65). 2240 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 21.0 (TID 65) in 18 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 21 (map at CoverageStats.scala:172) finished in 0.019 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 22)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 2.5 KB, free 117.0 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 1554.0 B, free 118.6 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:34658 (size: 1554.0 B, free: 511.0 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 68, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 69, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 70)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 69)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 71)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 68)
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 70). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 68). 1131 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 69). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 70) in 8 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 68) in 10 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 71). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 69) in 10 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 71) in 13 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 22 (collect at CoverageStats.scala:174) finished in 0.014 s
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 7 finished: collect at CoverageStats.scala:174, took 0.074736 s
19/02/28 21:14:16 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:16 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:16 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:16 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:16 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:16 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:16 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:16 INFO spark.SparkContext: Successfully stopped SparkContext
- two transcripts, one fully covered, one not covered at all, one random read
19/02/28 21:14:16 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:16 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:16 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:16 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:16 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:16 INFO util.Utils: Successfully started service 'sparkDriver' on port 50226.
19/02/28 21:14:16 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:16 INFO Remoting: Starting remoting
19/02/28 21:14:16 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:50227]
19/02/28 21:14:16 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 50227.
19/02/28 21:14:16 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:16 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:16 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-a4e1c670-c54d-4cbb-93f8-85743da0ef98
19/02/28 21:14:16 INFO storage.MemoryStore: MemoryStore started with capacity 491.6 MB
19/02/28 21:14:16 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:16 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:16 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 35826.
19/02/28 21:14:16 INFO netty.NettyBlockTransferService: Server created on 35826
19/02/28 21:14:16 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:16 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:35826 with 491.6 MB RAM, BlockManagerId(driver, localhost, 35826)
19/02/28 21:14:16 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:35826 (size: 1324.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2157 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_0_2 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_0_1 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_0_0 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_0_3 not found, computing it
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_0_2 stored as values in memory (estimated size 352.0 B, free 3.7 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_0_2 in memory on localhost:35826 (size: 352.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_0_1 stored as values in memory (estimated size 352.0 B, free 4.0 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_0_0 stored as values in memory (estimated size 352.0 B, free 4.4 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_0_1 in memory on localhost:35826 (size: 352.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_0_3 stored as values in memory (estimated size 632.0 B, free 5.0 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_0_0 in memory on localhost:35826 (size: 352.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_0_3 in memory on localhost:35826 (size: 632.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1548 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1548 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1548 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1548 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 29 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 20 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 25 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 19 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.030 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.038180 s
19/02/28 21:14:16 INFO spark.SparkContext: Starting job: collect at RightOuterJoin.scala:77
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at RightOuterJoin.scala:75)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Got job 1 (collect at RightOuterJoin.scala:77) with 4 output partitions
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (collect at RightOuterJoin.scala:77)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.0 KB, free 9.0 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.1 KB, free 11.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:35826 (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_0 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_2 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_3 not found, computing it
19/02/28 21:14:16 INFO spark.CacheManager: Partition rdd_1_1 not found, computing it
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_0 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_0 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_2 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_3 stored as values in memory (estimated size 4.7 KB, free 15.9 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_2 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block rdd_1_1 stored as values in memory (estimated size 4.7 KB, free 20.6 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_3 in memory on localhost:35826 (size: 4.7 KB, free: 491.6 MB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added rdd_1_1 in memory on localhost:35826 (size: 4.7 KB, free: 491.6 MB)
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 24 ms on localhost (1/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 17 ms on localhost (2/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1670 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 21 ms on localhost (3/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 28 ms on localhost (4/4)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:16 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at RightOuterJoin.scala:75) finished in 0.032 s
19/02/28 21:14:16 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:16 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:16 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76), which has no missing parents
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.8 KB, free 25.3 KB)
19/02/28 21:14:16 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 27.8 KB)
19/02/28 21:14:16 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:35826 (size: 2.5 KB, free: 491.6 MB)
19/02/28 21:14:16 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:16 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76)
19/02/28 21:14:16 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:16 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:16 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:16 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:16 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:16 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:16 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 11 ms on localhost (1/4)
19/02/28 21:14:16 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1239 bytes result sent to driver
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 11 ms on localhost (2/4)
19/02/28 21:14:16 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 13 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 13 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 2 (collect at RightOuterJoin.scala:77) finished in 0.016 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 1 finished: collect at RightOuterJoin.scala:77, took 0.068579 s
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 232.0 B, free 28.0 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 128.0 B, free 28.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:35826 (size: 128.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 3 from broadcast at RightOuterJoin.scala:86
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 9 (map at RightOuterJoin.scala:90)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at RightOuterJoin.scala:94)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 2 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.4 KB, free 31.5 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2039.0 B, free 33.5 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:35826 (size: 2039.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.7 KB, free 37.2 KB)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 39.3 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:35826 (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 19 ms on localhost (1/4)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_0_0 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 18 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_0_1 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 23 ms on localhost (3/4)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_0_2 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 21 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (map at RightOuterJoin.scala:90) finished in 0.027 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_0_3 locally
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 14 ms on localhost (1/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 13 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 12 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (flatMap at RightOuterJoin.scala:94) finished in 0.029 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.8 KB, free 43.1 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2047.0 B, free 45.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:35826 (size: 2047.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 22)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 20)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 23)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 21)
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_14_2 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_14_3 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_14_0 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_14_1 not found, computing it
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_14_2 stored as values in memory (estimated size 16.0 B, free 45.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_14_2 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_14_0 stored as values in memory (estimated size 392.0 B, free 45.5 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_14_0 in memory on localhost:35826 (size: 392.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_14_3 stored as values in memory (estimated size 16.0 B, free 45.5 KB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 22). 1704 bytes result sent to driver
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_14_3 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 20). 1767 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 22) in 13 ms on localhost (1/4)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_14_1 stored as values in memory (estimated size 6.0 KB, free 51.5 KB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 23). 1704 bytes result sent to driver
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_14_1 in memory on localhost:35826 (size: 6.0 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 20) in 15 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 23) in 15 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 21). 1767 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 21) in 20 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.021 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 2 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.079527 s
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:43
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 3 (count at TranscriptCounts.scala:43) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at TranscriptCounts.scala:43)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 1808.0 B, free 53.3 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1186.0 B, free 54.5 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:35826 (size: 1186.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 24)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 25)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 27)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 26)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 26). 2057 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 25). 2057 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 24). 2057 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 27). 2057 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 26) in 14 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 25) in 17 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 24) in 21 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 27) in 12 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 6 (count at TranscriptCounts.scala:43) finished in 0.021 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 3 finished: count at TranscriptCounts.scala:43, took 0.032519 s
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:51
19/02/28 21:14:17 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/02/28 21:14:17 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 165 bytes
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 19 (distinct at TranscriptCounts.scala:50)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 4 (count at TranscriptCounts.scala:51) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (count at TranscriptCounts.scala:51)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 9)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.0 KB, free 58.4 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.1 KB, free 60.5 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:35826 (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 29)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 30)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 28)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 31)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_14_1 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_14_3 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_14_0 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_14_2 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 31). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 28). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 29). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 31) in 11 ms on localhost (1/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 30). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 28) in 12 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 29) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 30) in 14 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 9 (distinct at TranscriptCounts.scala:50) finished in 0.014 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 10)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.1 KB, free 63.6 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1856.0 B, free 65.5 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:35826 (size: 1856.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 32, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 33, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 32)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 35)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 34)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 33)
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 33). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 35). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 34). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 32). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 33) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 35) in 10 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 34) in 11 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 32) in 13 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 10 (count at TranscriptCounts.scala:51) finished in 0.013 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 4 finished: count at TranscriptCounts.scala:51, took 0.046016 s
19/02/28 21:14:17 INFO rdd.ParallelCollectionRDD: Removing RDD 0 from persistence list
19/02/28 21:14:17 INFO storage.BlockManager: Removing RDD 0
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 28 (keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 5 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 12 (collect at BroadcastRegionJoin.scala:100)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 11)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 11)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.2 KB, free 68.0 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.2 KB, free 70.2 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:35826 (size: 2.2 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 11.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 36)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 38)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 11.0 (TID 39)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 37)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 38). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 36). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 36) in 11 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 38) in 9 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 11.0 (TID 39). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 11.0 (TID 39) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 37). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 37) in 17 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 11 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.019 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 12)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 5.0 KB, free 75.2 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.5 KB, free 77.7 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:35826 (size: 2.5 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 40, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 41, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 42, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 43, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 40)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 43)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 42)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 41)
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 43). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 41). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 40). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 42). 1239 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 43) in 6 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 41) in 8 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 40) in 8 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 42) in 9 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 12 (collect at BroadcastRegionJoin.scala:100) finished in 0.010 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 5 finished: collect at BroadcastRegionJoin.scala:100, took 0.042403 s
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 232.0 B, free 77.9 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 128.0 B, free 78.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:35826 (size: 128.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 12 from broadcast at BroadcastRegionJoin.scala:109
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 22 (flatMap at ReadCoverage.scala:59)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 32 (flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 30 (map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 39 (map at CoverageStats.scala:172)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 6 (collect at CoverageStats.scala:174) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (collect at CoverageStats.scala:174)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 2.7 KB, free 80.8 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 1677.0 B, free 82.4 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:35826 (size: 1677.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 3.6 KB, free 86.0 KB)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.1 KB, free 88.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:35826 (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 44)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 46)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 47)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 45)
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 44). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 46). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 48)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 49)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 44) in 25 ms on localhost (1/4)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_0 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 45). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 47). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 48). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_1 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 50)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 46) in 23 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 15.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_2 locally
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 15.0 (TID 51)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 45) in 27 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 47) in 24 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 13 (flatMap at ReadCoverage.scala:59) finished in 0.031 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 48) in 9 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 15)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 50). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_1_3 locally
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 50) in 7 ms on localhost (2/4)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.3 KB, free 92.4 KB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 49). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.4 KB, free 94.8 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:35826 (size: 2.4 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 49) in 13 ms on localhost (3/4)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 14.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 14.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 14.0 (TID 53, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 15.0 (TID 51). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 14.0 (TID 54, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 14.0 (TID 54)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 14.0 (TID 53)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 14.0 (TID 52)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 14.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 14.0 (TID 55)
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_23_0 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_23_1 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_23_2 not found, computing it
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_23_3 not found, computing it
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 15.0 (TID 51) in 13 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 15 (map at BroadcastRegionJoin.scala:113) finished in 0.031 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 14)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_23_1 stored as values in memory (estimated size 16.0 B, free 94.8 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_23_1 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_23_3 stored as values in memory (estimated size 16.0 B, free 94.9 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_23_3 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 14.0 (TID 54). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 14.0 (TID 55). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 14.0 (TID 54) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 14.0 (TID 55) in 9 ms on localhost (2/4)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:35826 in memory (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:35826 in memory (size: 1677.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:35826 in memory (size: 2.5 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 47
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:35826 in memory (size: 2.2 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 46
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned shuffle 4
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:35826 in memory (size: 1856.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 45
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:35826 in memory (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 44
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:35826 in memory (size: 1186.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 43
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:35826 in memory (size: 2047.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_23_2 stored as values in memory (estimated size 22.8 KB, free 74.0 KB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 42
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_23_2 in memory on localhost:35826 (size: 22.8 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_23_0 stored as values in memory (estimated size 22.8 KB, free 94.7 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:35826 in memory (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_23_0 in memory on localhost:35826 (size: 22.8 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 41
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:35826 in memory (size: 2039.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 40
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:35826 in memory (size: 2.5 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 39
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:35826 in memory (size: 2.1 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 38
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:35826 in memory (size: 1324.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.ContextCleaner: Cleaned accumulator 37
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 14.0 (TID 53). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 14.0 (TID 52). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 14.0 (TID 53) in 79 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 14.0 (TID 52) in 79 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 14.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 14 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.081 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.1 KB, free 73.0 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.2 KB, free 75.2 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:35826 (size: 2.2 KB, free: 491.6 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 57)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 56)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 59)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 58)
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_37_2 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_37_0 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_37_3 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_37_1 not found, computing it
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_37_3 stored as values in memory (estimated size 16.0 B, free 75.2 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_37_3 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_37_0 stored as values in memory (estimated size 16.0 B, free 75.2 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_37_2 stored as values in memory (estimated size 16.0 B, free 75.2 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_37_0 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_37_2 in memory on localhost:35826 (size: 16.0 B, free: 491.6 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 59). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 56). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 58). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 59) in 11 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 56) in 13 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 58) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_37_1 stored as values in memory (estimated size 45.8 KB, free 121.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_37_1 in memory on localhost:35826 (size: 45.8 KB, free: 491.5 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 57). 1886 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 57) in 64 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (map at CoverageStats.scala:172) finished in 0.065 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 2.5 KB, free 123.6 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 1554.0 B, free 125.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:35826 (size: 1554.0 B, free: 491.5 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 17.0 (TID 60, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 17.0 (TID 61, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 62, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 17.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 17.0 (TID 60)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 17.0 (TID 63)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 62)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 17.0 (TID 61)
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 17.0 (TID 60). 1131 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 62). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 62) in 6 ms on localhost (1/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 17.0 (TID 63). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 17.0 (TID 60) in 7 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 17.0 (TID 61). 1131 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 17.0 (TID 63) in 7 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 17.0 (TID 61) in 9 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 17 (collect at CoverageStats.scala:174) finished in 0.009 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 6 finished: collect at CoverageStats.scala:174, took 0.220418 s
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/02/28 21:14:17 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 8 is 159 bytes
19/02/28 21:14:17 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 161 bytes
19/02/28 21:14:17 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 161 bytes
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 42 (map at CoverageStats.scala:172)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 7 (collect at CoverageStats.scala:174) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (collect at CoverageStats.scala:174)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 21)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 21)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.2 KB, free 129.4 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.2 KB, free 131.6 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:35826 (size: 2.2 KB, free: 491.5 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 21.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 21.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 21.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 64)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 21.0 (TID 67)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 21.0 (TID 66)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 21.0 (TID 65)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_37_3 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_37_2 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_37_1 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_37_0 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 21.0 (TID 67). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 21.0 (TID 66). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 64). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 21.0 (TID 66) in 7 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 21.0 (TID 67) in 6 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 64) in 8 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 21.0 (TID 65). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 21.0 (TID 65) in 14 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 21 (map at CoverageStats.scala:172) finished in 0.015 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 22)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 2.5 KB, free 134.1 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 1554.0 B, free 135.6 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:35826 (size: 1554.0 B, free: 491.5 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 68, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 69, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 68)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 71)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 70)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 69)
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 71). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 70). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 71) in 6 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 70) in 7 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 69). 1124 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 68). 1131 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 69) in 8 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 68) in 9 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 22 (collect at CoverageStats.scala:174) finished in 0.009 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 7 finished: collect at CoverageStats.scala:174, took 0.039468 s
19/02/28 21:14:17 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:17 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:17 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:17 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:17 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:17 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:17 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:17 INFO spark.SparkContext: Successfully stopped SparkContext
- two SO transcripts, one fully covered, one not covered at all, one random read
19/02/28 21:14:17 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:17 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:17 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:17 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:17 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:17 INFO util.Utils: Successfully started service 'sparkDriver' on port 57211.
19/02/28 21:14:17 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:17 INFO Remoting: Starting remoting
19/02/28 21:14:17 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:57212]
19/02/28 21:14:17 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 57212.
19/02/28 21:14:17 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:17 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:17 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-7fbb70fd-562e-49bb-a7bc-81e2833cf1f7
19/02/28 21:14:17 INFO storage.MemoryStore: MemoryStore started with capacity 501.4 MB
19/02/28 21:14:17 INFO spark.SparkEnv: Registering OutputCommitCoordinator
PanelBasesSuite:
19/02/28 21:14:17 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:17 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 37339.
19/02/28 21:14:17 INFO netty.NettyBlockTransferService: Server created on 37339
19/02/28 21:14:17 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:17 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:37339 with 501.4 MB RAM, BlockManagerId(driver, localhost, 37339)
19/02/28 21:14:17 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at PanelBases.scala:67
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 0 (count at PanelBases.scala:67) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at PanelBases.scala:67)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 1840.0 B, free 1840.0 B)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1207.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:37339 (size: 1207.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2050 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_2 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_0 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_1 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_3 not found, computing it
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_2 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_2 in memory on localhost:37339 (size: 16.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_0 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_1 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_0 in memory on localhost:37339 (size: 16.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_1 in memory on localhost:37339 (size: 16.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1487 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1487 bytes result sent to driver
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_3 stored as values in memory (estimated size 5.5 KB, free 8.5 KB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1487 bytes result sent to driver
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_3 in memory on localhost:37339 (size: 5.5 KB, free: 501.4 MB)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 14 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1488 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 11 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 0 (count at PanelBases.scala:67) finished in 0.015 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 0 finished: count at PanelBases.scala:67, took 0.022503 s
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at PanelBases.scala:68
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 4 (distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 1 (count at PanelBases.scala:68) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (count at PanelBases.scala:68)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.9 KB, free 11.4 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1761.0 B, free 13.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:37339 (size: 1761.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 10 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 14 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (distinct at PanelBases.scala:59) finished in 0.018 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 3.1 KB, free 16.2 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1840.0 B, free 18.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:37339 (size: 1840.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_6_2 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_6_3 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_6_1 not found, computing it
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_6_0 not found, computing it
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_6_1 stored as values in memory (estimated size 2.5 KB, free 20.5 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_6_1 in memory on localhost:37339 (size: 2.5 KB, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_6_2 stored as values in memory (estimated size 3.2 KB, free 23.7 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_6_3 stored as values in memory (estimated size 2.7 KB, free 26.4 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_6_2 in memory on localhost:37339 (size: 3.2 KB, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_6_0 stored as values in memory (estimated size 3.4 KB, free 29.8 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_6_3 in memory on localhost:37339 (size: 2.7 KB, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_6_0 in memory on localhost:37339 (size: 3.4 KB, free: 501.4 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1703 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1703 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1703 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1703 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 9 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 9 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 10 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 2 (count at PanelBases.scala:68) finished in 0.010 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 1 finished: count at PanelBases.scala:68, took 0.040672 s
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at PanelBases.scala:69
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 2 (flatMap at PanelBases.scala:46)
19/02/28 21:14:17 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 6 (distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 2 (count at PanelBases.scala:69) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at PanelBases.scala:69)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 2.6 KB, free 32.3 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1633.0 B, free 33.9 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:37339 (size: 1633.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.2 KB, free 37.1 KB)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1931.0 B, free 39.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:37339 (size: 1931.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_2_0 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_2_2 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_2_3 locally
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_2_1 locally
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 16)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 17)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_6_0 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 18)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 11 ms on localhost (1/4)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_6_1 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 10 ms on localhost (2/4)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_6_2 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 19)
19/02/28 21:14:17 INFO storage.BlockManager: Found block rdd_6_3 locally
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 14 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at PanelBases.scala:46) finished in 0.018 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 5)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 16). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 17). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 17) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 16) in 10 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 18). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 18) in 13 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 19). 2240 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 19) in 10 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (distinct at PanelBases.scala:59) finished in 0.020 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.4 KB, free 42.4 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1980.0 B, free 44.4 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:37339 (size: 1980.0 B, free: 501.3 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 20)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 23)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 21)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 22)
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:17 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 23). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 23) in 8 ms on localhost (1/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 21). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 21) in 10 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 22). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 20). 1123 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 22) in 14 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 20) in 15 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 6 (count at PanelBases.scala:69) finished in 0.015 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 2 finished: count at PanelBases.scala:69, took 0.054572 s
19/02/28 21:14:17 INFO rdd.MapPartitionsRDD: Removing RDD 2 from persistence list
19/02/28 21:14:17 INFO storage.BlockManager: Removing RDD 2
19/02/28 21:14:17 INFO rdd.MapPartitionsRDD: Removing RDD 6 from persistence list
19/02/28 21:14:17 INFO storage.BlockManager: Removing RDD 6
19/02/28 21:14:17 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:17 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:17 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:17 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:17 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:17 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:17 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:17 INFO spark.SparkContext: Successfully stopped SparkContext
- compute coverage for a panel with one bait and one target
19/02/28 21:14:17 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:17 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:17 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:17 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:17 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:17 INFO util.Utils: Successfully started service 'sparkDriver' on port 52561.
19/02/28 21:14:17 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:17 INFO Remoting: Starting remoting
19/02/28 21:14:17 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52562]
19/02/28 21:14:17 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52562.
19/02/28 21:14:17 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:17 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:17 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-b7dd7ac7-abd3-4d57-afb8-66423e9860e7
19/02/28 21:14:17 INFO storage.MemoryStore: MemoryStore started with capacity 501.4 MB
19/02/28 21:14:17 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:17 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:17 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 44767.
19/02/28 21:14:17 INFO netty.NettyBlockTransferService: Server created on 44767
19/02/28 21:14:17 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:17 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:44767 with 501.4 MB RAM, BlockManagerId(driver, localhost, 44767)
19/02/28 21:14:17 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at PanelBases.scala:67
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 0 (count at PanelBases.scala:67) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at PanelBases.scala:67)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 1840.0 B, free 1840.0 B)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1207.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:44767 (size: 1207.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2050 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_2 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_0 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_1 not found, computing it
19/02/28 21:14:17 INFO spark.CacheManager: Partition rdd_2_3 not found, computing it
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_2 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_2 in memory on localhost:44767 (size: 16.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_1 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_0 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_1 in memory on localhost:44767 (size: 16.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_0 in memory on localhost:44767 (size: 16.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block rdd_2_3 stored as values in memory (estimated size 5.5 KB, free 8.5 KB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1487 bytes result sent to driver
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added rdd_2_3 in memory on localhost:44767 (size: 5.5 KB, free: 501.4 MB)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1487 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1487 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1488 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 10 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 14 ms on localhost (2/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 11 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ResultStage 0 (count at PanelBases.scala:67) finished in 0.015 s
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Job 0 finished: count at PanelBases.scala:67, took 0.021653 s
19/02/28 21:14:17 INFO spark.SparkContext: Starting job: count at PanelBases.scala:68
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Registering RDD 4 (distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Got job 1 (count at PanelBases.scala:68) with 4 output partitions
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (count at PanelBases.scala:68)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.9 KB, free 11.4 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1761.0 B, free 13.1 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:44767 (size: 1761.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:17 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 13 ms on localhost (1/4)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 12 ms on localhost (2/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 12 ms on localhost (3/4)
19/02/28 21:14:17 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 18 ms on localhost (4/4)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:17 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (distinct at PanelBases.scala:59) finished in 0.019 s
19/02/28 21:14:17 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:17 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:17 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 3.1 KB, free 16.2 KB)
19/02/28 21:14:17 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1840.0 B, free 18.0 KB)
19/02/28 21:14:17 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:44767 (size: 1840.0 B, free: 501.4 MB)
19/02/28 21:14:17 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:17 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/02/28 21:14:17 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:17 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:17 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:17 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:17 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_3 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_1 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_0 not found, computing it
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_2 not found, computing it
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_1 stored as values in memory (estimated size 2.5 KB, free 20.5 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_3 stored as values in memory (estimated size 2.7 KB, free 23.2 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_1 in memory on localhost:44767 (size: 2.5 KB, free: 501.4 MB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_3 in memory on localhost:44767 (size: 2.7 KB, free: 501.4 MB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_0 stored as values in memory (estimated size 3.4 KB, free 26.6 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_0 in memory on localhost:44767 (size: 3.4 KB, free: 501.4 MB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_2 stored as values in memory (estimated size 3.2 KB, free 29.8 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_2 in memory on localhost:44767 (size: 3.2 KB, free: 501.4 MB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 10 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 10 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 13 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 13 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 2 (count at PanelBases.scala:68) finished in 0.014 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 1 finished: count at PanelBases.scala:68, took 0.048981 s
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: count at PanelBases.scala:69
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 2 (flatMap at PanelBases.scala:46)
19/02/28 21:14:18 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 165 bytes
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 6 (distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 2 (count at PanelBases.scala:69) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at PanelBases.scala:69)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 2.6 KB, free 32.3 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1633.0 B, free 33.9 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:44767 (size: 1633.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.2 KB, free 37.1 KB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1931.0 B, free 39.0 KB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:44767 (size: 1931.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_0 locally
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_2 locally
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_1 locally
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_3 locally
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 16)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_0 locally
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 17)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 18)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_1 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 18 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 16 ms on localhost (2/4)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_2 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 15 ms on localhost (3/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 19)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 16). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_3 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 18 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at PanelBases.scala:46) finished in 0.025 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 5)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 17). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 16) in 9 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 18). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 17) in 10 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 18) in 9 ms on localhost (3/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 19). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 19) in 10 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (distinct at PanelBases.scala:59) finished in 0.023 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.4 KB, free 42.4 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1980.0 B, free 44.4 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:44767 (size: 1980.0 B, free: 501.3 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 22)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 21)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 23)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 20)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 23). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 23) in 8 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 21). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 21) in 10 ms on localhost (2/4)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:44767 in memory (size: 1931.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:44767 in memory (size: 1633.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 20). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 22). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:44767 in memory (size: 1840.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO spark.ContextCleaner: Cleaned accumulator 63
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:44767 in memory (size: 1761.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO spark.ContextCleaner: Cleaned accumulator 62
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:44767 in memory (size: 1207.0 B, free: 501.4 MB)
19/02/28 21:14:18 INFO spark.ContextCleaner: Cleaned accumulator 61
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 20) in 53 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 22) in 54 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 6 (count at PanelBases.scala:69) finished in 0.055 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 2 finished: count at PanelBases.scala:69, took 0.107248 s
19/02/28 21:14:18 INFO rdd.MapPartitionsRDD: Removing RDD 2 from persistence list
19/02/28 21:14:18 INFO storage.BlockManager: Removing RDD 2
19/02/28 21:14:18 INFO rdd.MapPartitionsRDD: Removing RDD 6 from persistence list
19/02/28 21:14:18 INFO storage.BlockManager: Removing RDD 6
19/02/28 21:14:18 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:18 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:18 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:18 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:18 INFO spark.SparkContext: Successfully stopped SparkContext
- compute coverage for a panel with two baits and one target
19/02/28 21:14:18 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:18 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriver' on port 54112.
19/02/28 21:14:18 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:18 INFO Remoting: Starting remoting
19/02/28 21:14:18 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54113]
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54113.
19/02/28 21:14:18 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:18 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:18 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-55b6186d-f0ec-435f-a8aa-021a2caa806b
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/02/28 21:14:18 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:18 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40993.
19/02/28 21:14:18 INFO netty.NettyBlockTransferService: Server created on 40993
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:18 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40993 with 500.3 MB RAM, BlockManagerId(driver, localhost, 40993)
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: count at PanelBases.scala:67
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 0 (count at PanelBases.scala:67) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at PanelBases.scala:67)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 1840.0 B, free 1840.0 B)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1207.0 B, free 3.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40993 (size: 1207.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2050 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_2_3 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_2_2 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_2_0 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_2_1 not found, computing it
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_2_2 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_2_2 in memory on localhost:40993 (size: 16.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_2_1 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_2_0 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_2_1 in memory on localhost:40993 (size: 16.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_2_0 in memory on localhost:40993 (size: 16.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_2_3 stored as values in memory (estimated size 5.5 KB, free 8.5 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_2_3 in memory on localhost:40993 (size: 5.5 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1487 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1487 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1488 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1487 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 17 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 14 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 12 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 21 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 0 (count at PanelBases.scala:67) finished in 0.022 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 0 finished: count at PanelBases.scala:67, took 0.032418 s
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: count at PanelBases.scala:68
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 4 (distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 1 (count at PanelBases.scala:68) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (count at PanelBases.scala:68)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.9 KB, free 11.4 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1761.0 B, free 13.1 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40993 (size: 1761.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 15 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 13 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 17 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 15 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (distinct at PanelBases.scala:59) finished in 0.019 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 3.1 KB, free 16.2 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1840.0 B, free 18.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40993 (size: 1840.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_3 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_0 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_2 not found, computing it
19/02/28 21:14:18 INFO spark.CacheManager: Partition rdd_6_1 not found, computing it
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_3 stored as values in memory (estimated size 2.7 KB, free 20.7 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_1 stored as values in memory (estimated size 2.5 KB, free 23.2 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_3 in memory on localhost:40993 (size: 2.7 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_0 stored as values in memory (estimated size 3.4 KB, free 26.6 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_1 in memory on localhost:40993 (size: 2.5 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_0 in memory on localhost:40993 (size: 3.4 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block rdd_6_2 stored as values in memory (estimated size 3.2 KB, free 29.8 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added rdd_6_2 in memory on localhost:40993 (size: 3.2 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1703 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 10 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 11 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 12 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 12 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 2 (count at PanelBases.scala:68) finished in 0.013 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 1 finished: count at PanelBases.scala:68, took 0.046427 s
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: count at PanelBases.scala:69
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 2 (flatMap at PanelBases.scala:46)
19/02/28 21:14:18 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 165 bytes
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 6 (distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 2 (count at PanelBases.scala:69) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at PanelBases.scala:69)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 2.6 KB, free 32.3 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1633.0 B, free 33.9 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:40993 (size: 1633.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.2 KB, free 37.1 KB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1931.0 B, free 39.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:40993 (size: 1931.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_1 locally
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_0 locally
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_3 locally
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_2_2 locally
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 16)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 17)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_0 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 11 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 18)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_1 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 15 ms on localhost (2/4)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_2 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 11 ms on localhost (3/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 19)
19/02/28 21:14:18 INFO storage.BlockManager: Found block rdd_6_3 locally
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 15 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at PanelBases.scala:46) finished in 0.021 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 5)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 16). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 17). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 18). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 17) in 12 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 16) in 12 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 18) in 12 ms on localhost (3/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 19). 2240 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 19) in 10 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (distinct at PanelBases.scala:59) finished in 0.023 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.4 KB, free 42.4 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1980.0 B, free 44.4 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:40993 (size: 1980.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 20)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 23)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 22)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 21)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 23). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 21). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 23) in 8 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 21) in 10 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 20). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 22). 1123 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 20) in 14 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 22) in 16 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 6 (count at PanelBases.scala:69) finished in 0.016 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 2 finished: count at PanelBases.scala:69, took 0.058254 s
19/02/28 21:14:18 INFO rdd.MapPartitionsRDD: Removing RDD 2 from persistence list
19/02/28 21:14:18 INFO storage.BlockManager: Removing RDD 2
19/02/28 21:14:18 INFO rdd.MapPartitionsRDD: Removing RDD 6 from persistence list
19/02/28 21:14:18 INFO storage.BlockManager: Removing RDD 6
19/02/28 21:14:18 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:18 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:18 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:18 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:18 INFO spark.SparkContext: Successfully stopped SparkContext
- compute coverage for a panel with two overlapping baits and one target
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:18 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:18 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
RNASeqReadCountsSuite:
- check stats for an unaligned read
- check stats for an unique read, mapped on the forward strand
- check stats for an unique read, mapped on the reverse strand
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriver' on port 52284.
- check stats for a duplicated read, mapped on the forward strand
- check stats for a duplicated read, mapped on the reverse strand
19/02/28 21:14:18 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:18 INFO Remoting: Starting remoting
19/02/28 21:14:18 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52285]
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52285.
19/02/28 21:14:18 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:18 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:18 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-5ac6ca60-5c1a-4bb9-8c62-2da45118163f
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/02/28 21:14:18 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:18 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 33583.
19/02/28 21:14:18 INFO netty.NettyBlockTransferService: Server created on 33583
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:18 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:33583 with 500.3 MB RAM, BlockManagerId(driver, localhost, 33583)
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:33583 (size: 1324.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at RNASeqReadCounts.scala:79)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2157 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 934 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 934 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 934 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 934 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 12 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 15 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 12 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.017 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.022219 s
19/02/28 21:14:18 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:18 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:18 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:18 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:18 INFO spark.SparkContext: Successfully stopped SparkContext
- run simple roll up
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:18 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:18 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
ComparisonTraversalEngineSuite:
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriver' on port 52437.
19/02/28 21:14:18 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:18 INFO Remoting: Starting remoting
19/02/28 21:14:18 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52438]
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52438.
19/02/28 21:14:18 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:18 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:18 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-58f4045c-f593-499b-ba48-ce1e27041fd5
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/02/28 21:14:18 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:18 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 37537.
19/02/28 21:14:18 INFO netty.NettyBlockTransferService: Server created on 37537
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:18 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:37537 with 500.3 MB RAM, BlockManagerId(driver, localhost, 37537)
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: collect at ComparisonTraversalEngineSuite.scala:66
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 2 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at ComparisonTraversalEngine.scala:43)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 7 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 11 (keyBy at ComparisonTraversalEngine.scala:45)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 0 (collect at ComparisonTraversalEngineSuite.scala:66) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (collect at ComparisonTraversalEngineSuite.scala:66)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1913.0 B, free 5.4 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:37537 (size: 1913.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.5 KB, free 8.9 KB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1915.0 B, free 10.7 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:37537 (size: 1915.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 5)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 16 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 14 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 6)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 4) in 9 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 7)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 21 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 20 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.025 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 1, ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43), which has no missing parents
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 6) in 7 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 5) in 15 ms on localhost (3/4)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 5.1 KB, free 15.8 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 18.4 KB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:37537 (size: 2.5 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 7) in 13 ms on localhost (4/4)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 9)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 11)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 10)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 8)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (groupBy at SingleReadBucket.scala:34) finished in 0.028 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45), which has no missing parents
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 5.1 KB, free 23.5 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.5 KB, free 26.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:37537 (size: 2.5 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 11). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 10). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 11) in 9 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 10) in 10 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 9). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 8). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 9) in 20 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 8) in 21 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 14 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at ComparisonTraversalEngine.scala:43) finished in 0.022 s
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 14 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 7 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 7 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (keyBy at ComparisonTraversalEngine.scala:45) finished in 0.020 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.6 KB, free 29.6 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.0 KB, free 31.6 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:37537 (size: 2.0 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 1124 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 1124 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 10 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 10 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 1139 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 1139 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 13 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 13 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 4 (collect at ComparisonTraversalEngineSuite.scala:66) finished in 0.014 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 0 finished: collect at ComparisonTraversalEngineSuite.scala:66, took 0.087098 s
19/02/28 21:14:18 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:18 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:18 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:18 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:18 INFO spark.SparkContext: Successfully stopped SparkContext
- generate works on a simple RDD
19/02/28 21:14:18 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:18 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriver' on port 54466.
19/02/28 21:14:18 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:18 INFO Remoting: Starting remoting
19/02/28 21:14:18 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54467]
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54467.
19/02/28 21:14:18 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:18 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:18 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-852e362f-c93c-4c63-970e-c94f977c44ae
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/02/28 21:14:18 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:18 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:18 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 36721.
19/02/28 21:14:18 INFO netty.NettyBlockTransferService: Server created on 36721
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:18 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:36721 with 500.3 MB RAM, BlockManagerId(driver, localhost, 36721)
19/02/28 21:14:18 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:18 INFO spark.SparkContext: Starting job: aggregate at ComparisonTraversalEngine.scala:88
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 2 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at ComparisonTraversalEngine.scala:43)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 7 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Registering RDD 11 (keyBy at ComparisonTraversalEngine.scala:45)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Got job 0 (aggregate at ComparisonTraversalEngine.scala:88) with 4 output partitions
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (aggregate at ComparisonTraversalEngine.scala:88)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1913.0 B, free 5.4 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:36721 (size: 1913.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.5 KB, free 8.9 KB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1915.0 B, free 10.7 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:36721 (size: 1915.0 B, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 39 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 5)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 4) in 11 ms on localhost (1/4)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 6)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 7)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 45 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 45 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 47 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.049 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 1, ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 5.1 KB, free 15.8 KB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 18.4 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:36721 (size: 2.5 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 5) in 13 ms on localhost (2/4)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 10)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 9)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 8)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 11)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 6) in 13 ms on localhost (3/4)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 7) in 12 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (groupBy at SingleReadBucket.scala:34) finished in 0.052 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 5.1 KB, free 23.5 KB)
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 10). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 11). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.5 KB, free 26.0 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:36721 (size: 2.5 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 10) in 7 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 11) in 7 ms on localhost (2/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 8). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 9). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 8) in 14 ms on localhost (3/4)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 9) in 14 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at ComparisonTraversalEngine.scala:43) finished in 0.015 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 6 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 6 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1306 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 13 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 12 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (keyBy at ComparisonTraversalEngine.scala:45) finished in 0.013 s
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:18 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:18 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76), which has no missing parents
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.3 KB, free 30.3 KB)
19/02/28 21:14:18 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 32.6 KB)
19/02/28 21:14:18 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:36721 (size: 2.3 KB, free: 500.2 MB)
19/02/28 21:14:18 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:18 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/02/28 21:14:18 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/02/28 21:14:18 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/02/28 21:14:18 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:18 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 1171 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 1171 bytes result sent to driver
19/02/28 21:14:18 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 1206 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 16 ms on localhost (1/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 17 ms on localhost (2/4)
19/02/28 21:14:18 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 1171 bytes result sent to driver
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 20 ms on localhost (3/4)
19/02/28 21:14:18 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 22 ms on localhost (4/4)
19/02/28 21:14:18 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:18 INFO scheduler.DAGScheduler: ResultStage 4 (aggregate at ComparisonTraversalEngine.scala:88) finished in 0.023 s
19/02/28 21:14:18 INFO scheduler.DAGScheduler: Job 0 finished: aggregate at ComparisonTraversalEngine.scala:88, took 0.122166 s
19/02/28 21:14:18 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:18 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:18 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:18 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:18 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:18 INFO spark.SparkContext: Successfully stopped SparkContext
- combine works on a simple RDD
19/02/28 21:14:18 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:18 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:18 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:18 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
AFFromVCFSuite:
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriver' on port 56850.
19/02/28 21:14:19 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:19 INFO Remoting: Starting remoting
19/02/28 21:14:19 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:56851]
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 56851.
19/02/28 21:14:19 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:19 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:19 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-1e982e16-e0aa-456b-bde6-b179ed591797
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore started with capacity 522.8 MB
19/02/28 21:14:19 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:19 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 36905.
19/02/28 21:14:19 INFO netty.NettyBlockTransferService: Server created on 36905
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:19 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:36905 with 522.8 MB RAM, BlockManagerId(driver, localhost, 36905)
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 33.1 KB, free 33.1 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 3.7 KB, free 36.8 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:36905 (size: 3.7 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopFile at AFFromVCF.scala:40
19/02/28 21:14:19 INFO input.FileInputFormat: Total input paths to process : 1
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: count at AFFromVCFSuite.scala:27
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 0 (count at AFFromVCFSuite.scala:27) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at AFFromVCFSuite.scala:27)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at AFFromVCF.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.7 KB, free 39.5 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1631.0 B, free 41.1 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:36905 (size: 1631.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at AFFromVCF.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2257 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:19 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/af.vcf:0+365
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 2057 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 49 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 0 (count at AFFromVCFSuite.scala:27) finished in 0.049 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 0 finished: count at AFFromVCFSuite.scala:27, took 0.061847 s
19/02/28 21:14:19 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:19 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:19 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:19 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:19 INFO spark.SparkContext: Successfully stopped SparkContext
- converting variant contexts
19/02/28 21:14:19 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:19 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:19 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:19 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
ComparisonsSuite:
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriver' on port 51529.
19/02/28 21:14:19 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:19 INFO Remoting: Starting remoting
19/02/28 21:14:19 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:51530]
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 51530.
19/02/28 21:14:19 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:19 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:19 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-9adc4ab5-f5f4-4eaf-9833-9019142d0aa7
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore started with capacity 522.8 MB
19/02/28 21:14:19 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:19 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 42464.
19/02/28 21:14:19 INFO netty.NettyBlockTransferService: Server created on 42464
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:19 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:42464 with 522.8 MB RAM, BlockManagerId(driver, localhost, 42464)
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:42464 (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 15 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 12 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 15 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.020 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 7 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.038689 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 7 ms on localhost (1/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 8 ms on localhost (2/3)
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 10 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.016658 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:42464 (size: 1912.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 10 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 8 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 9 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 13 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.017 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 7 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.034473 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 7 ms on localhost (1/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 6 ms on localhost (2/3)
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 12 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.017882 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:42464 (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 11 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 10 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 10 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 14 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.018 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 7 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.037352 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 7 ms on localhost (1/3)
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 9 ms on localhost (2/3)
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 11 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.020156 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:42464 (size: 1914.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 8 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 10 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 7 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 11 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.015 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 6 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.031906 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 7 ms on localhost (1/3)
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 9 ms on localhost (2/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 10 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.018266 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:42464 (size: 1913.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 8 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 8 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 10 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 13 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.016 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 8 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.037375 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 7 ms on localhost (1/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 8 ms on localhost (2/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 8 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.014633 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:42464 (size: 1914.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned shuffle 2
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 99
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 98
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:42464 in memory (size: 1913.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 97
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 23 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 20 ms on localhost (2/4)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned shuffle 4
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 21 ms on localhost (3/4)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 96
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 95
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:42464 in memory (size: 1914.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 94
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 93
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 92
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 24 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.028 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:42464 in memory (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 91
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 90
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 41.3 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 89
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:42464 in memory (size: 1912.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 88
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned shuffle 1
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 87
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:42464 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 86
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:42464 in memory (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned accumulator 85
19/02/28 21:14:19 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 7 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.045650 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 6 ms on localhost (1/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 7 ms on localhost (2/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 7 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.013066 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:42464 (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 10 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 8 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 8 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 12 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.016 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 6 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.032720 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 7 ms on localhost (1/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 6 ms on localhost (2/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 7 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.013569 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:42464 (size: 1913.0 B, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/02/28 21:14:19 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 16 ms on localhost (1/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 13 ms on localhost (2/4)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 15 ms on localhost (3/4)
19/02/28 21:14:19 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 18 ms on localhost (4/4)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.022 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:19 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 6 ms on localhost (1/1)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.038654 s
19/02/28 21:14:19 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:19 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:19 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:19 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:42464 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:19 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:19 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/02/28 21:14:19 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/02/28 21:14:19 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:19 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:19 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/02/28 21:14:19 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 6 ms on localhost (1/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 8 ms on localhost (2/3)
19/02/28 21:14:19 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 8 ms on localhost (3/3)
19/02/28 21:14:19 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:19 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/02/28 21:14:19 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.014251 s
19/02/28 21:14:19 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:19 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:19 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:19 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:19 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:19 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:19 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:19 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:19 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriver' on port 53918.
19/02/28 21:14:19 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:19 INFO Remoting: Starting remoting
19/02/28 21:14:19 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:53919]
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 53919.
19/02/28 21:14:19 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:19 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:19 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-a25df16c-6a3e-42db-a357-823a6d6123b0
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore started with capacity 522.4 MB
19/02/28 21:14:19 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:19 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 39734.
19/02/28 21:14:19 INFO netty.NettyBlockTransferService: Server created on 39734
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:19 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:39734 with 522.4 MB RAM, BlockManagerId(driver, localhost, 39734)
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:19 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:19 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:19 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:19 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:19 INFO spark.SparkContext: Successfully stopped SparkContext
- Dupe mismatches found
19/02/28 21:14:19 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:19 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:19 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:19 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriver' on port 55260.
19/02/28 21:14:19 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:19 INFO Remoting: Starting remoting
19/02/28 21:14:19 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:55261]
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 55261.
19/02/28 21:14:19 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:19 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:19 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-8f6c627e-5e47-4cf1-abd2-ed1d39b71833
19/02/28 21:14:19 INFO storage.MemoryStore: MemoryStore started with capacity 522.4 MB
19/02/28 21:14:19 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:19 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:19 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 37080.
19/02/28 21:14:19 INFO netty.NettyBlockTransferService: Server created on 37080
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:19 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:37080 with 522.4 MB RAM, BlockManagerId(driver, localhost, 37080)
19/02/28 21:14:19 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:37080 (size: 1915.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 12 ms on localhost (1/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 16 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 14 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 14 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.018 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 8 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.037820 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 12 ms on localhost (1/3)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 18 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 20 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.020 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.029211 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:37080 (size: 1912.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 18 ms on localhost (1/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 22 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 16 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 20 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.028 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 7 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.048526 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 7 ms on localhost (1/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 7 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 7 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.012830 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:37080 (size: 1915.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 9 ms on localhost (1/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 7 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 8 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 12 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.016 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 6 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.034597 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 7 ms on localhost (1/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 8 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 9 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.017853 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:37080 (size: 1914.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 9 ms on localhost (1/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 14 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 14 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 14 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.019 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 9 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.047082 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 11 ms on localhost (1/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 11 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 12 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.022296 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:37080 (size: 1913.0 B, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 17 ms on localhost (1/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 14 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 12 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 15 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.024 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 8 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.047968 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 7 ms on localhost (1/3)
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 7 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 8 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.016920 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:37080 (size: 1914.0 B, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 117
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.3 MB)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 123
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.3 MB)
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 122
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 26 ms on localhost (1/4)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:37080 in memory (size: 1913.0 B, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 121
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 30 ms on localhost (2/4)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned shuffle 4
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.3 MB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 120
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 119
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 35 ms on localhost (3/4)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:37080 in memory (size: 1914.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 118
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 29 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.036 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 116
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:37080 in memory (size: 1915.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 58.5 KB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 115
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned shuffle 2
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 114
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 113
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:37080 in memory (size: 1912.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 112
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned shuffle 1
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 111
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 110
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:37080 in memory (size: 1915.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned accumulator 109
19/02/28 21:14:20 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:37080 in memory (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 6 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.052682 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 8 ms on localhost (1/3)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 10 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 11 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.021827 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:37080 (size: 1915.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 8 ms on localhost (1/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 10 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 8 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 10 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.014 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 6 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.030357 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 12 ms on localhost (1/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 11 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 13 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.015 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.024628 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:37080 (size: 1913.0 B, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 13 ms on localhost (1/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 12 ms on localhost (2/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 12 ms on localhost (3/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 15 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.019 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 8 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.039418 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:37080 (size: 2.3 KB, free: 522.4 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 6 ms on localhost (1/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 7 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 9 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.015456 s
19/02/28 21:14:20 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:20 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:20 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:20 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:20 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:20 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:20 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:20 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:20 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:20 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:20 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:20 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:20 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:20 INFO util.Utils: Successfully started service 'sparkDriver' on port 50458.
19/02/28 21:14:20 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:20 INFO Remoting: Starting remoting
19/02/28 21:14:20 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:50459]
19/02/28 21:14:20 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 50459.
19/02/28 21:14:20 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:20 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:20 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-128e1020-d2b1-4048-9c39-a794b1281b43
19/02/28 21:14:20 INFO storage.MemoryStore: MemoryStore started with capacity 522.8 MB
19/02/28 21:14:20 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:20 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:20 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 44726.
19/02/28 21:14:20 INFO netty.NettyBlockTransferService: Server created on 44726
19/02/28 21:14:20 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:20 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:44726 with 522.8 MB RAM, BlockManagerId(driver, localhost, 44726)
19/02/28 21:14:20 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:20 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:20 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:20 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:20 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:20 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:20 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:20 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:20 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:20 INFO spark.SparkContext: Running Spark version 1.6.1
- Mismatched mapped positions histogram generated
19/02/28 21:14:20 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:20 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:20 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:20 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:20 INFO util.Utils: Successfully started service 'sparkDriver' on port 56069.
19/02/28 21:14:20 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:20 INFO Remoting: Starting remoting
19/02/28 21:14:20 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:56070]
19/02/28 21:14:20 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 56070.
19/02/28 21:14:20 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:20 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:20 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-c42d4d15-bd6e-445a-b217-78d886ecf63a
19/02/28 21:14:20 INFO storage.MemoryStore: MemoryStore started with capacity 522.8 MB
19/02/28 21:14:20 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:20 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:20 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40947.
19/02/28 21:14:20 INFO netty.NettyBlockTransferService: Server created on 40947
19/02/28 21:14:20 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:20 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40947 with 522.8 MB RAM, BlockManagerId(driver, localhost, 40947)
19/02/28 21:14:20 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40947 (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 10 ms on localhost (1/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 15 ms on localhost (2/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 14 ms on localhost (3/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 15 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.018 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 9 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.040443 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 7 ms on localhost (1/3)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 10 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 11 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.020168 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:40947 (size: 1912.0 B, free: 522.7 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/02/28 21:14:20 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 8 ms on localhost (1/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 13 ms on localhost (2/4)
19/02/28 21:14:20 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 14 ms on localhost (3/4)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 13 ms on localhost (4/4)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.017 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:20 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 11 ms on localhost (1/1)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.041472 s
19/02/28 21:14:20 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:20 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:20 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:20 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:20 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:20 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/02/28 21:14:20 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/02/28 21:14:20 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:20 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/02/28 21:14:20 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 10 ms on localhost (1/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 11 ms on localhost (2/3)
19/02/28 21:14:20 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 12 ms on localhost (3/3)
19/02/28 21:14:20 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/02/28 21:14:20 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:20 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.021703 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:40947 (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 7 ms on localhost (1/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 13 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 14 ms on localhost (3/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 13 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.017 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 9 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.037774 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 9 ms on localhost (1/3)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 12 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 13 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.019542 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:40947 (size: 1914.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 16 ms on localhost (1/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 13 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 10 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 16 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.024 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 13 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.055199 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 8 ms on localhost (1/3)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 12 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 13 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.021120 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:40947 (size: 1913.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 10 ms on localhost (1/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 14 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 15 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 14 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.018 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 7 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.041755 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 8 ms on localhost (1/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 10 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 12 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.023237 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:40947 (size: 1914.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 15 ms on localhost (1/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 14 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 13 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 28 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.035 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 147
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 146
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 91.8 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:40947 in memory (size: 1913.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 145
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned shuffle 4
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 144
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 81.9 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 143
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:40947 in memory (size: 1914.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 142
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 141
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 140
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:40947 in memory (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 7 ms on localhost (1/1)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 139
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned shuffle 2
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.051645 s
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 138
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 137
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:40947 in memory (size: 1912.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 136
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned shuffle 1
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 135
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:40947 in memory (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 134
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:40947 in memory (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned accumulator 133
19/02/28 21:14:21 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 8 ms on localhost (1/3)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 9 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 10 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.016875 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:40947 (size: 1915.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 14 ms on localhost (1/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 17 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 20 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 17 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.023 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 6 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.039042 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 8 ms on localhost (1/3)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 12 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 13 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.022996 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:40947 (size: 1913.0 B, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 18 ms on localhost (1/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 17 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 15 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 17 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.025 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 12 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.051783 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:40947 (size: 2.3 KB, free: 522.7 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 9 ms on localhost (1/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 8 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 8 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.021562 s
19/02/28 21:14:21 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:21 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:21 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:21 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:21 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:21 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:21 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:21 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:21 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:21 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:21 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:21 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:21 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:21 INFO util.Utils: Successfully started service 'sparkDriver' on port 53777.
19/02/28 21:14:21 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:21 INFO Remoting: Starting remoting
19/02/28 21:14:21 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:53778]
19/02/28 21:14:21 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 53778.
19/02/28 21:14:21 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:21 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:21 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-ad70a639-c3c4-4053-8a00-7b8895b6c385
19/02/28 21:14:21 INFO storage.MemoryStore: MemoryStore started with capacity 508.9 MB
19/02/28 21:14:21 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:21 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:21 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 38420.
19/02/28 21:14:21 INFO netty.NettyBlockTransferService: Server created on 38420
19/02/28 21:14:21 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:21 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:38420 with 508.9 MB RAM, BlockManagerId(driver, localhost, 38420)
19/02/28 21:14:21 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:21 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:21 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:21 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:21 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:21 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:21 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:21 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:21 INFO spark.SparkContext: Successfully stopped SparkContext
- Test map quality scores
19/02/28 21:14:21 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:21 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:21 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:21 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:21 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:21 INFO util.Utils: Successfully started service 'sparkDriver' on port 58130.
19/02/28 21:14:21 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:21 INFO Remoting: Starting remoting
19/02/28 21:14:21 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:58131]
19/02/28 21:14:21 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 58131.
19/02/28 21:14:21 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:21 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:21 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-41767c19-8bbb-4bd8-9491-224dd33ec89f
19/02/28 21:14:21 INFO storage.MemoryStore: MemoryStore started with capacity 508.9 MB
19/02/28 21:14:21 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:21 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:21 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 41253.
19/02/28 21:14:21 INFO netty.NettyBlockTransferService: Server created on 41253
19/02/28 21:14:21 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:21 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:41253 with 508.9 MB RAM, BlockManagerId(driver, localhost, 41253)
19/02/28 21:14:21 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:41253 (size: 1915.0 B, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 13 ms on localhost (1/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 15 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 17 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 18 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.021 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 10 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.045554 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 13 ms on localhost (1/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 12 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 15 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.016 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.023109 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:41253 (size: 1912.0 B, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 13 ms on localhost (1/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 11 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 16 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 14 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.021 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 6 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.038688 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 7 ms on localhost (1/3)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 9 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 8 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.014946 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:41253 (size: 1915.0 B, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 11 ms on localhost (1/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 19 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 16 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 15 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.023 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 13 ms on localhost (1/1)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.014 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.052886 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 11 ms on localhost (1/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 14 ms on localhost (2/3)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 15 ms on localhost (3/3)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.015 s
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.025153 s
19/02/28 21:14:21 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:41253 (size: 1914.0 B, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/02/28 21:14:21 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/02/28 21:14:21 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/02/28 21:14:21 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 8 ms on localhost (1/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 7 ms on localhost (2/4)
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 9 ms on localhost (3/4)
19/02/28 21:14:21 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 13 ms on localhost (4/4)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/02/28 21:14:21 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.016 s
19/02/28 21:14:21 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:21 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/02/28 21:14:21 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/02/28 21:14:21 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/02/28 21:14:21 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:21 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:21 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:21 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/02/28 21:14:21 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:21 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:21 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:21 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 6 ms on localhost (1/1)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.033800 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 6 ms on localhost (1/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 6 ms on localhost (2/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 7 ms on localhost (3/3)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.012486 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:41253 (size: 1913.0 B, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 9 ms on localhost (1/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 11 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 10 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 11 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.015 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 5 ms on localhost (1/1)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.005 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.029963 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 9 ms on localhost (1/3)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 12 ms on localhost (2/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 12 ms on localhost (3/3)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.019061 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:41253 (size: 1914.0 B, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 10 ms on localhost (1/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 16 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 19 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 14 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.022 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 105.5 KB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 157
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 107.8 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 171
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 170
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:41253 in memory (size: 1913.0 B, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 169
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 4
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.8 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 168
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 164
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 6 ms on localhost (1/1)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:41253 in memory (size: 1915.0 B, free: 508.8 MB)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.051850 s
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 163
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 2
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 162
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 161
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:41253 in memory (size: 1912.0 B, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 160
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 1
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 159
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 167
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:41253 in memory (size: 1914.0 B, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 166
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 165
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:41253 in memory (size: 1915.0 B, free: 508.9 MB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 23.7 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:41253 in memory (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 158
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 7 ms on localhost (1/3)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 12 ms on localhost (2/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 13 ms on localhost (3/3)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.018933 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:41253 (size: 1915.0 B, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 8 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 9 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 8 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 11 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.014 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 6 ms on localhost (1/1)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.028969 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 6 ms on localhost (1/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 6 ms on localhost (2/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 6 ms on localhost (3/3)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.011928 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:41253 (size: 1913.0 B, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 13 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 17 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 12 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 16 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.024 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 6 ms on localhost (1/1)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.040191 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/02/28 21:14:22 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:41253 (size: 2.3 KB, free: 508.9 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 6 ms on localhost (1/3)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 6 ms on localhost (2/3)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 7 ms on localhost (3/3)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.013588 s
19/02/28 21:14:22 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:22 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:22 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:22 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:22 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:22 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:22 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriver' on port 59337.
19/02/28 21:14:22 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:22 INFO Remoting: Starting remoting
19/02/28 21:14:22 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59338]
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59338.
19/02/28 21:14:22 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:22 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:22 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-0759dfc8-1c3c-4644-b63b-961b374d09a1
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/02/28 21:14:22 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:22 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 39865.
19/02/28 21:14:22 INFO netty.NettyBlockTransferService: Server created on 39865
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:22 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:39865 with 521.6 MB RAM, BlockManagerId(driver, localhost, 39865)
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:22 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:22 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:22 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:22 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:22 INFO spark.SparkContext: Successfully stopped SparkContext
- Test base quality scores
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:22 WARN contamination.VariantSite: Failed to create observation for read null due to java.lang.StringIndexOutOfBoundsException: String index out of range: 0. Dropping...
19/02/28 21:14:22 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:22 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
VariantSiteSuite:
- read overlaps a site and agrees with the reference
- read overlaps a site and agrees with the alt
- read overlaps a site and is an other-alt
- read has no bases and should fail on conversion
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriver' on port 59144.
ReadStatsSuite:
- perfect read
- noQualRead should be equivalent to the perfect read, and should not NPE
- read failed vendor qc
- read is a dupe
- all of the bases in a read are low quality
- the start/end of the read have low quality scores
- read's mapping quality is zero
- read is mapped with low, but non-zero mapping quality
- first-of-pair read overlaps mate
- second-of-pair read overlaps mate
- unpaired, but otherwise perfect read
- merge two read stats instances
19/02/28 21:14:22 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:22 INFO Remoting: Starting remoting
19/02/28 21:14:22 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59145]
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59145.
19/02/28 21:14:22 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:22 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:22 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-16e259e7-cb91-4903-a0ae-4ddd93f4d43f
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/02/28 21:14:22 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:22 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 39127.
19/02/28 21:14:22 INFO netty.NettyBlockTransferService: Server created on 39127
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:22 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:39127 with 521.6 MB RAM, BlockManagerId(driver, localhost, 39127)
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: reduce at ReadStats.scala:253
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 0 (reduce at ReadStats.scala:253) with 4 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at ReadStats.scala:253)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at ReadStats.scala:252), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.2 KB, free 2.2 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1430.0 B, free 3.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:39127 (size: 1430.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at ReadStats.scala:252)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2290 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2422 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2290 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2422 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 952 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 952 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 952 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 952 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 10 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 14 ms on localhost (3/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 11 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at ReadStats.scala:253) finished in 0.016 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 0 finished: reduce at ReadStats.scala:253, took 0.021297 s
19/02/28 21:14:22 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:22 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:22 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:22 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:22 INFO spark.SparkContext: Successfully stopped SparkContext
- run an aggregate across all reads
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:22 WARN rna.RNASeqAlignmentCounts: Found unknown feature type random. Ignoring.
19/02/28 21:14:22 WARN rna.RNASeqAlignmentCounts: Found unknown feature type SO:0000110. Ignoring.
19/02/28 21:14:22 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:22 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
RNASeqAlignmentCountsSuite:
- should get an intergenic count if we pass a None
- should get an intragenic count if we pass a transcript
- should get an exonic count if we pass an exon
- should get an intronic count if we pass an intron
- should get an rRNA count if we pass an rRNA site
- should get nothing if we pass a random feature
- should get an intragenic count if we pass an SO transcript
- should get an exonic count if we pass an SO exon
- should get an intronic count if we pass an SO intron
- should get an rRNA count if we pass an SO rRNA site
- should get nothing if we pass a random SO feature
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriver' on port 56355.
19/02/28 21:14:22 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:22 INFO Remoting: Starting remoting
19/02/28 21:14:22 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:56356]
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 56356.
19/02/28 21:14:22 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:22 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:22 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-ce99b40a-34a8-4a89-936a-eaeb5d11b96d
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/02/28 21:14:22 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:22 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 36971.
19/02/28 21:14:22 INFO netty.NettyBlockTransferService: Server created on 36971
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:22 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:36971 with 521.6 MB RAM, BlockManagerId(driver, localhost, 36971)
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqAlignmentCounts.scala:72)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2032.0 B, free 2032.0 B)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1266.0 B, free 3.2 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:36971 (size: 1266.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at flatMap at RNASeqAlignmentCounts.scala:71)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2014 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2054 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2067 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2087 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 937 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 937 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 937 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 937 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 23 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 23 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 20 ms on localhost (3/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 18 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.029 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.038618 s
19/02/28 21:14:22 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:22 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:22 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:22 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:22 INFO spark.SparkContext: Successfully stopped SparkContext
- run aggregate
19/02/28 21:14:22 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:22 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:22 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:22 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
GenotypeConcordanceRDDFunctionsSuite:
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriver' on port 51768.
19/02/28 21:14:22 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:22 INFO Remoting: Starting remoting
19/02/28 21:14:22 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:51769]
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 51769.
19/02/28 21:14:22 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:22 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:22 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-0633e83e-020f-439b-bc84-ad6d222e894e
19/02/28 21:14:22 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/02/28 21:14:22 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:22 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:22 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 34648.
19/02/28 21:14:22 INFO netty.NettyBlockTransferService: Server created on 34648
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:22 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:34648 with 521.6 MB RAM, BlockManagerId(driver, localhost, 34648)
19/02/28 21:14:22 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 3 (keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 12 (union at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 0 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42) with 8 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.8 KB, free 2.8 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1705.0 B, free 4.5 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:34648 (size: 1705.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[3] at keyBy at GenotypeConcordanceRDDFunctions.scala:49), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.8 KB, free 7.4 KB)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1709.0 B, free 9.0 KB)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:34648 (size: 1709.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[3] at keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 2.8 KB, free 11.9 KB)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1676.0 B, free 13.5 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:34648 (size: 1676.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 20 ms on localhost (1/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 21 ms on localhost (2/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 27 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 13 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 10 ms on localhost (2/4)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 14 ms on localhost (3/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 32 ms on localhost (4/4)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.037 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1, ShuffleMapStage 2)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 7 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 11 ms on localhost (2/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 14 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at GenotypeConcordanceRDDFunctions.scala:49) finished in 0.030 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 7 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 13 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.035 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (UnionRDD[12] at union at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 4.7 KB, free 18.2 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.4 KB, free 20.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:34648 (size: 2.4 KB, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ShuffleMapStage 3 (UnionRDD[12] at union at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 8 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 3.0 (TID 16, localhost, partition 4,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 4.0 in stage 3.0 (TID 16)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 3.0 (TID 17, localhost, partition 5,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 5.0 in stage 3.0 (TID 17)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 3.0 (TID 18, localhost, partition 6,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 6.0 in stage 3.0 (TID 18)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 14 ms on localhost (1/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 16 ms on localhost (2/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 15 ms on localhost (3/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 3.0 (TID 19, localhost, partition 7,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 7.0 in stage 3.0 (TID 19)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 19 ms on localhost (4/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 4.0 in stage 3.0 (TID 16). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 5.0 in stage 3.0 (TID 17). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 6.0 in stage 3.0 (TID 18). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 3.0 (TID 16) in 13 ms on localhost (5/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 3.0 (TID 17) in 11 ms on localhost (6/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 3.0 (TID 18) in 12 ms on localhost (7/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 7.0 in stage 3.0 (TID 19). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 3.0 (TID 19) in 14 ms on localhost (8/8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (union at GenotypeConcordanceRDDFunctions.scala:65) finished in 0.033 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (ShuffledRDD[13] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 2.6 KB, free 23.1 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1474.0 B, free 24.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:34648 (size: 1474.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ResultStage 4 (ShuffledRDD[13] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 8 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 4.0 (TID 20, localhost, partition 5,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 21, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 22, localhost, partition 1,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 23, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 5.0 in stage 4.0 (TID 20)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 21)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 22)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 23)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 23). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 24, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 24)
19/02/28 21:14:22 INFO executor.Executor: Finished task 5.0 in stage 4.0 (TID 20). 1217 bytes result sent to driver
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 4.0 (TID 25, localhost, partition 4,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 4.0 in stage 4.0 (TID 25)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 23) in 7 ms on localhost (1/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 22). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 4.0 (TID 20) in 9 ms on localhost (2/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 4.0 (TID 26, localhost, partition 6,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 6.0 in stage 4.0 (TID 26)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 24). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 21). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 4.0 (TID 27, localhost, partition 7,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 7.0 in stage 4.0 (TID 27)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 22) in 11 ms on localhost (3/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 4.0 in stage 4.0 (TID 25). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 24) in 6 ms on localhost (4/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 21) in 12 ms on localhost (5/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 4.0 (TID 25) in 5 ms on localhost (6/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 6.0 in stage 4.0 (TID 26). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 4.0 (TID 26) in 6 ms on localhost (7/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 7.0 in stage 4.0 (TID 27). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 4.0 (TID 27) in 8 ms on localhost (8/8)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 4 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42) finished in 0.019 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 0 finished: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42, took 0.135693 s
19/02/28 21:14:22 INFO spark.SparkContext: Starting job: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 19 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 17 (keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 19 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Registering RDD 26 (union at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Got job 1 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50) with 8 output partitions
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 2.8 KB, free 27.4 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1711.0 B, free 29.1 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:34648 (size: 1711.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 6 (MapPartitionsRDD[17] at keyBy at GenotypeConcordanceRDDFunctions.scala:49), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 2.8 KB, free 31.9 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1707.0 B, free 33.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:34648 (size: 1707.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 6 (MapPartitionsRDD[17] at keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 28)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 31)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 30)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 29)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 7 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 2.8 KB, free 36.4 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1680.0 B, free 38.1 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:34648 (size: 1680.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 28). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 29). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 7 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 4 tasks
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 30). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 32)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 33)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 28) in 22 ms on localhost (1/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 32). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 34)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 35)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 29) in 20 ms on localhost (2/4)
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 33). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 31). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:34648 in memory (size: 1474.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 34). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 36)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 32) in 20 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 30) in 31 ms on localhost (3/4)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 187
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:34648 in memory (size: 2.4 KB, free: 521.6 MB)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 33) in 19 ms on localhost (2/4)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 37)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 186
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:34648 in memory (size: 1676.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 185
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:34648 in memory (size: 1709.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 38)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 31) in 32 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.043 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 6, ShuffleMapStage 7)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9, ShuffleMapStage 8)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 184
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 36). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:34648 in memory (size: 1705.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned accumulator 183
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 3
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 2
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 1
19/02/28 21:14:22 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 38). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 35). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 37). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 7.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 34) in 25 ms on localhost (3/4)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 7.0 (TID 39)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 36) in 24 ms on localhost (1/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 37) in 12 ms on localhost (2/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 38) in 10 ms on localhost (3/4)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 35) in 28 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 6 (keyBy at GenotypeConcordanceRDDFunctions.scala:49) finished in 0.039 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 7)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9, ShuffleMapStage 8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 7.0 (TID 39). 1090 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 7.0 (TID 39) in 15 ms on localhost (4/4)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 7 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.039 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9, ShuffleMapStage 8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (UnionRDD[26] at union at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.7 KB, free 18.2 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.4 KB, free 20.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:34648 (size: 2.4 KB, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ShuffleMapStage 8 (UnionRDD[26] at union at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 8 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 42)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 41)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 43)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 40)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 41). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 42). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 40). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 8.0 (TID 44, localhost, partition 4,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 4.0 in stage 8.0 (TID 44)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 8.0 (TID 45, localhost, partition 5,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 5.0 in stage 8.0 (TID 45)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 8.0 (TID 46, localhost, partition 6,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 6.0 in stage 8.0 (TID 46)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 41) in 16 ms on localhost (1/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 42) in 16 ms on localhost (2/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 40) in 18 ms on localhost (3/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 43). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 8.0 (TID 47, localhost, partition 7,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 7.0 in stage 8.0 (TID 47)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 43) in 21 ms on localhost (4/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 5.0 in stage 8.0 (TID 45). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 6.0 in stage 8.0 (TID 46). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 8.0 (TID 45) in 9 ms on localhost (5/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 8.0 (TID 46) in 9 ms on localhost (6/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 4.0 in stage 8.0 (TID 44). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 8.0 (TID 44) in 14 ms on localhost (7/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 7.0 in stage 8.0 (TID 47). 1310 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 8.0 (TID 47) in 13 ms on localhost (8/8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (union at GenotypeConcordanceRDDFunctions.scala:65) finished in 0.033 s
19/02/28 21:14:22 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (ShuffledRDD[27] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 2.6 KB, free 23.1 KB)
19/02/28 21:14:22 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1475.0 B, free 24.6 KB)
19/02/28 21:14:22 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:34648 (size: 1475.0 B, free: 521.6 MB)
19/02/28 21:14:22 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ResultStage 9 (ShuffledRDD[27] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 8 tasks
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 9.0 (TID 48, localhost, partition 5,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 49, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 50, localhost, partition 1,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 51, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 5.0 in stage 9.0 (TID 48)
19/02/28 21:14:22 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 50)
19/02/28 21:14:22 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 49)
19/02/28 21:14:22 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 51)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 51). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 50). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 49). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 5.0 in stage 9.0 (TID 48). 1217 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 52, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 52)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 9.0 (TID 53, localhost, partition 4,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 4.0 in stage 9.0 (TID 53)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 9.0 (TID 54, localhost, partition 6,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 6.0 in stage 9.0 (TID 54)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 9.0 (TID 55, localhost, partition 7,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:22 INFO executor.Executor: Running task 7.0 in stage 9.0 (TID 55)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 51) in 6 ms on localhost (1/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 49) in 7 ms on localhost (2/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 50) in 7 ms on localhost (3/8)
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/02/28 21:14:22 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 9.0 (TID 48) in 8 ms on localhost (4/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 52). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 4.0 in stage 9.0 (TID 53). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO executor.Executor: Finished task 6.0 in stage 9.0 (TID 54). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 52) in 5 ms on localhost (5/8)
19/02/28 21:14:22 INFO executor.Executor: Finished task 7.0 in stage 9.0 (TID 55). 1124 bytes result sent to driver
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 9.0 (TID 53) in 5 ms on localhost (6/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 9.0 (TID 54) in 5 ms on localhost (7/8)
19/02/28 21:14:22 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 9.0 (TID 55) in 5 ms on localhost (8/8)
19/02/28 21:14:22 INFO scheduler.DAGScheduler: ResultStage 9 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50) finished in 0.012 s
19/02/28 21:14:22 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/02/28 21:14:22 INFO scheduler.DAGScheduler: Job 1 finished: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50, took 0.128237 s
19/02/28 21:14:22 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:23 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:23 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:23 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:23 INFO spark.SparkContext: Successfully stopped SparkContext
- concordance of identical and non-identical genotypes
19/02/28 21:14:23 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:23 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriver' on port 50743.
19/02/28 21:14:23 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:23 INFO Remoting: Starting remoting
19/02/28 21:14:23 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:50744]
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 50744.
19/02/28 21:14:23 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:23 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:23 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-dbb73eb7-0d12-4443-9075-27a99901519e
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/02/28 21:14:23 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:23 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 37297.
19/02/28 21:14:23 INFO netty.NettyBlockTransferService: Server created on 37297
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:23 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:37297 with 522.0 MB RAM, BlockManagerId(driver, localhost, 37297)
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:23 INFO rdd.ADAMContext: Loading /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf as VCF, and converting to Genotypes. Projection is ignored.
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 33.1 KB, free 33.1 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 3.7 KB, free 36.8 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:37297 (size: 3.7 KB, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopFile at ADAMContext.scala:586
19/02/28 21:14:23 INFO input.FileInputFormat: Total input paths to process : 1
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: count at GenotypeConcordanceRDDFunctionsSuite.scala:60
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 0 (count at GenotypeConcordanceRDDFunctionsSuite.scala:60) with 1 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at GenotypeConcordanceRDDFunctionsSuite.scala:60)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[3] at filter at GenotypeConcordanceRDDFunctionsSuite.scala:60), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.1 KB, free 39.9 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1853.0 B, free 41.7 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:37297 (size: 1853.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 0 (MapPartitionsRDD[3] at filter at GenotypeConcordanceRDDFunctionsSuite.scala:60)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 1 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2260 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:23 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 2057 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 57 ms on localhost (1/1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 0 (count at GenotypeConcordanceRDDFunctionsSuite.scala:60) finished in 0.058 s
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 0 finished: count at GenotypeConcordanceRDDFunctionsSuite.scala:60, took 0.065989 s
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 14 (union at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 1 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62) with 2 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.1 KB, free 45.8 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 48.1 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:37297 (size: 2.3 KB, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:49), which has no missing parents
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 1, localhost, partition 0,PROCESS_LOCAL, 2249 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 1)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 4.1 KB, free 52.2 KB)
19/02/28 21:14:23 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.3 KB, free 54.4 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:37297 (size: 2.3 KB, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 1 tasks
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 2, localhost, partition 0,PROCESS_LOCAL, 2249 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 2)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.1 KB, free 58.5 KB)
19/02/28 21:14:23 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 60.8 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:37297 (size: 2.3 KB, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 1 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 3, localhost, partition 0,PROCESS_LOCAL, 2249 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 3)
19/02/28 21:14:23 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 1). 2237 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 2). 2237 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 2) in 26 ms on localhost (1/1)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (keyBy at GenotypeConcordanceRDDFunctions.scala:49) finished in 0.026 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1, ShuffleMapStage 3)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 1) in 35 ms on localhost (1/1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5, ShuffleMapStage 4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.037 s
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 3). 2237 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5, ShuffleMapStage 4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 3) in 21 ms on localhost (1/1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.022 s
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5, ShuffleMapStage 4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (UnionRDD[14] at union at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.7 KB, free 65.5 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.4 KB, free 67.9 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:37297 (size: 2.4 KB, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 2 missing tasks from ShuffleMapStage 4 (UnionRDD[14] at union at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 2 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2065 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2173 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 5)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 4)
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 4). 1304 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 4) in 29 ms on localhost (1/2)
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 5). 1304 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 5) in 34 ms on localhost (2/2)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (union at GenotypeConcordanceRDDFunctions.scala:65) finished in 0.035 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (ShuffledRDD[15] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 2.6 KB, free 70.4 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1475.0 B, free 71.9 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:37297 (size: 1475.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 2 missing tasks from ResultStage 5 (ShuffledRDD[15] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 2 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 6, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 7, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 6)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 7)
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 2 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 2 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 6). 1217 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 7). 1257 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 7) in 11 ms on localhost (1/2)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 6) in 12 ms on localhost (2/2)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 5 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62) finished in 0.012 s
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 1 finished: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62, took 0.104928 s
19/02/28 21:14:23 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:23 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:23 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:23 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:23 INFO spark.SparkContext: Successfully stopped SparkContext
- concordance of identical VCFs should be 1.0
19/02/28 21:14:23 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:23 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
GenotypesSummarySuite:
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriver' on port 54894.
19/02/28 21:14:23 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:23 INFO Remoting: Starting remoting
19/02/28 21:14:23 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54895]
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54895.
19/02/28 21:14:23 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:23 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:23 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-d020f5ae-9a07-43bd-ba2a-f9c5fcabdbb5
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/02/28 21:14:23 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:23 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 38261.
19/02/28 21:14:23 INFO netty.NettyBlockTransferService: Server created on 38261
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:23 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:38261 with 522.0 MB RAM, BlockManagerId(driver, localhost, 38261)
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: fold at GenotypesSummary.scala:196
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 0 (fold at GenotypesSummary.scala:196) with 4 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (fold at GenotypesSummary.scala:196)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.1 KB, free 2.1 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1295.0 B, free 3.4 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:38261 (size: 1295.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2220 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2287 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2287 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2287 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1138 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1138 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1135 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1240 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 23 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 20 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 32 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 29 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 0 (fold at GenotypesSummary.scala:196) finished in 0.033 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 0 finished: fold at GenotypesSummary.scala:196, took 0.043471 s
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: countByValue at GenotypesSummary.scala:202
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 5 (countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 1 (countByValue at GenotypesSummary.scala:202) with 4 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.4 KB, free 6.7 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1878.0 B, free 8.6 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:38261 (size: 1878.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2209 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2276 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2276 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2276 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 11 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 15 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 17 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 14 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (countByValue at GenotypesSummary.scala:202) finished in 0.018 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 2.6 KB, free 11.2 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1583.0 B, free 12.8 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:38261 (size: 1583.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1159 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1300 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1159 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1229 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 11 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 11 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 11 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 11 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 2 (countByValue at GenotypesSummary.scala:202) finished in 0.011 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 1 finished: countByValue at GenotypesSummary.scala:202, took 0.044297 s
19/02/28 21:14:23 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:23 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:23 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:23 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:23 INFO spark.SparkContext: Successfully stopped SparkContext
- simple genotypes summary
19/02/28 21:14:23 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:23 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriver' on port 57388.
19/02/28 21:14:23 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:23 INFO Remoting: Starting remoting
19/02/28 21:14:23 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:57389]
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 57389.
19/02/28 21:14:23 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:23 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:23 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-3bb4f80f-a981-4d26-93f1-5084203f6a78
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/02/28 21:14:23 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:23 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 33998.
19/02/28 21:14:23 INFO netty.NettyBlockTransferService: Server created on 33998
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:23 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:33998 with 522.0 MB RAM, BlockManagerId(driver, localhost, 33998)
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: fold at GenotypesSummary.scala:196
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 0 (fold at GenotypesSummary.scala:196) with 4 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (fold at GenotypesSummary.scala:196)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.1 KB, free 2.1 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1295.0 B, free 3.4 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:33998 (size: 1295.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2016 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2016 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2016 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2083 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 915 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 915 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 915 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1065 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 20 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 16 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 18 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 18 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 0 (fold at GenotypesSummary.scala:196) finished in 0.026 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 0 finished: fold at GenotypesSummary.scala:196, took 0.032185 s
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: countByValue at GenotypesSummary.scala:202
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 5 (countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 1 (countByValue at GenotypesSummary.scala:202) with 4 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.4 KB, free 6.7 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1878.0 B, free 8.6 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:33998 (size: 1878.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 19 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 13 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 15 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 18 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (countByValue at GenotypesSummary.scala:202) finished in 0.021 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 2.6 KB, free 11.2 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1583.0 B, free 12.8 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:33998 (size: 1583.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 12 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 11 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 11 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 13 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 2 (countByValue at GenotypesSummary.scala:202) finished in 0.014 s
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 1 finished: countByValue at GenotypesSummary.scala:202, took 0.053795 s
19/02/28 21:14:23 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:23 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:23 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:23 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:23 INFO spark.SparkContext: Successfully stopped SparkContext
- empty genotypes summary
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:23 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:23 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
CoverageStatsSuite:
- take simple mean of all equally weighted points
- take simple mean of inequally weighted points
- take simple median of all equally weighted points
- take simple median of inequally weighted points
- take median when it lies between points
- covered at 0 should return all sites
- covered at 2 should return fewer sites
- covered at 5 should return no sites
GeneratorFilterSuite:
- CombinedFilter combines two independent filters
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriver' on port 55131.
ReadCoverageSuite:
- unmapped reads should emit no coverage observations
- generate coverage observations for a mapped read
19/02/28 21:14:23 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:23 INFO Remoting: Starting remoting
19/02/28 21:14:23 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:55132]
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 55132.
19/02/28 21:14:23 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:23 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:23 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-6f648895-56d1-4f4b-b98d-ff48c64f6c38
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/02/28 21:14:23 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:23 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 45476.
19/02/28 21:14:23 INFO netty.NettyBlockTransferService: Server created on 45476
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:23 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:45476 with 522.0 MB RAM, BlockManagerId(driver, localhost, 45476)
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: collect at ReadCoverageSuite.scala:70
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 1 (flatMap at ReadCoverage.scala:59)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 0 (collect at ReadCoverageSuite.scala:70) with 4 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (collect at ReadCoverageSuite.scala:70)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.7 KB, free 2.7 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1681.0 B, free 4.4 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:45476 (size: 1681.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at flatMap at ReadCoverage.scala:59)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2216 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2216 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2216 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2216 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 40 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 44 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 46 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 49 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (flatMap at ReadCoverage.scala:59) finished in 0.051 s
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (ShuffledRDD[2] at reduceByKey at ReadCoverage.scala:60), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.8 KB, free 7.2 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1708.0 B, free 8.8 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:45476 (size: 1708.0 B, free: 522.0 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 1 (ShuffledRDD[2] at reduceByKey at ReadCoverage.scala:60)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 4, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 5, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 6, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 7, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 4)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 5)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 6)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 7)
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 6). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 4). 1292 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 5). 1271 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 7). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 6) in 6 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 4) in 8 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 5) in 8 ms on localhost (3/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 7) in 8 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ResultStage 1 (collect at ReadCoverageSuite.scala:70) finished in 0.009 s
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Job 0 finished: collect at ReadCoverageSuite.scala:70, took 0.074182 s
19/02/28 21:14:23 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:23 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:23 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:23 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/02/28 21:14:23 INFO spark.SparkContext: Successfully stopped SparkContext
- generate coverage observations for several mapped reads, and an unaligned read
19/02/28 21:14:23 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:23 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:23 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:23 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
ContaminationEstimatorSuite:
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriver' on port 58830.
19/02/28 21:14:23 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:23 INFO Remoting: Starting remoting
19/02/28 21:14:23 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:58831]
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 58831.
19/02/28 21:14:23 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:23 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:23 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-c88e15cd-4c88-4962-8fa3-1b0282c9e04f
19/02/28 21:14:23 INFO storage.MemoryStore: MemoryStore started with capacity 521.3 MB
19/02/28 21:14:23 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:23 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:23 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 44436.
19/02/28 21:14:23 INFO netty.NettyBlockTransferService: Server created on 44436
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:23 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:44436 with 521.3 MB RAM, BlockManagerId(driver, localhost, 44436)
19/02/28 21:14:23 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:23 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Got job 0 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (collect at BroadcastRegionJoin.scala:100)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 4.1 KB, free 4.1 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 2.2 KB, free 6.3 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:44436 (size: 2.2 KB, free: 521.2 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2128 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 14 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 12 ms on localhost (3/4)
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 16 ms on localhost (4/4)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.020 s
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:23 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:23 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:23 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.9 KB, free 11.2 KB)
19/02/28 21:14:23 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.5 KB, free 13.7 KB)
19/02/28 21:14:23 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:44436 (size: 2.5 KB, free: 521.2 MB)
19/02/28 21:14:23 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:23 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99)
19/02/28 21:14:23 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:23 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/02/28 21:14:23 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/02/28 21:14:23 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/02/28 21:14:23 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:23 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1124 bytes result sent to driver
19/02/28 21:14:23 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1228 bytes result sent to driver
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 7 ms on localhost (1/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 6 ms on localhost (2/4)
19/02/28 21:14:23 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 6 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 1 (collect at BroadcastRegionJoin.scala:100) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 0 finished: collect at BroadcastRegionJoin.scala:100, took 0.045722 s
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 216.0 B, free 13.9 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 124.0 B, free 14.0 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:44436 (size: 124.0 B, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 2 from broadcast at BroadcastRegionJoin.scala:109
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: count at ContaminationEstimator.scala:85
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Registering RDD 8 (map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 1 (count at ContaminationEstimator.scala:85) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (count at ContaminationEstimator.scala:85)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2, ShuffleMapStage 3)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 2, ShuffleMapStage 3)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[8] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 17.5 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.1 KB, free 19.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:44436 (size: 2.1 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[8] at map at BroadcastRegionJoin.scala:113)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[10] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.9 KB, free 23.5 KB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.2 KB, free 25.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:44436 (size: 2.2 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[10] at flatMap at BroadcastRegionJoin.scala:118)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2128 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2279 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2411 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 10 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2279 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 13 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 11 ms on localhost (3/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2411 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 15 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (map at BroadcastRegionJoin.scala:113) finished in 0.019 s
19/02/28 21:14:24 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:24 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 12 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 15 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 11 ms on localhost (3/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 12 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.023 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:24 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (MapPartitionsRDD[16] at flatMap at ContaminationEstimator.scala:78), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.9 KB, free 29.5 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 31.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:44436 (size: 2.1 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 4 (MapPartitionsRDD[16] at flatMap at ContaminationEstimator.scala:78)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/02/28 21:14:24 INFO spark.CacheManager: Partition rdd_16_1 not found, computing it
19/02/28 21:14:24 INFO spark.CacheManager: Partition rdd_16_3 not found, computing it
19/02/28 21:14:24 INFO spark.CacheManager: Partition rdd_16_2 not found, computing it
19/02/28 21:14:24 INFO spark.CacheManager: Partition rdd_16_0 not found, computing it
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/02/28 21:14:24 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/02/28 21:14:24 INFO storage.MemoryStore: Block rdd_16_1 stored as values in memory (estimated size 16.0 B, free 31.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added rdd_16_1 in memory on localhost:44436 (size: 16.0 B, free: 521.2 MB)
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 1703 bytes result sent to driver
19/02/28 21:14:24 INFO storage.MemoryStore: Block rdd_16_3 stored as values in memory (estimated size 16.0 B, free 31.6 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block rdd_16_0 stored as values in memory (estimated size 16.0 B, free 31.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added rdd_16_3 in memory on localhost:44436 (size: 16.0 B, free: 521.2 MB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added rdd_16_0 in memory on localhost:44436 (size: 16.0 B, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 10 ms on localhost (1/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 1703 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 1703 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 12 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 12 ms on localhost (3/4)
19/02/28 21:14:24 INFO storage.MemoryStore: Block rdd_16_2 stored as values in memory (estimated size 616.0 B, free 32.2 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added rdd_16_2 in memory on localhost:44436 (size: 616.0 B, free: 521.2 MB)
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 1703 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 18 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 4 (count at ContaminationEstimator.scala:85) finished in 0.018 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 1 finished: count at ContaminationEstimator.scala:85, took 0.057426 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/02/28 21:14:24 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 160 bytes
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 2 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 6)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[17] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 4.4 KB, free 36.6 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.9 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 7 (MapPartitionsRDD[17] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 7.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 20)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 7.0 (TID 23)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 21)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 22)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 7.0 (TID 23). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 21). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 20). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 22). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 7.0 (TID 23) in 4 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 21) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 20) in 6 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 22) in 5 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 7 (reduce at ContaminationEstimator.scala:115) finished in 0.006 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 2 finished: reduce at ContaminationEstimator.scala:115, took 0.012289 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 3 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9, ShuffleMapStage 8)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[18] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.4 KB, free 43.2 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 45.5 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[18] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 24)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 26)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 25)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 27)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 24). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 26). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 25). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 27). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 26) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 24) in 7 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 25) in 8 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 27) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 10 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 3 finished: reduce at ContaminationEstimator.scala:115, took 0.014683 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 4 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12, ShuffleMapStage 11)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[19] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.4 KB, free 49.9 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 52.1 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 13 (MapPartitionsRDD[19] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 31)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 30)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 29)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 29). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 31). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 30). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 29) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 31) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 30) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 9 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 13 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 4 finished: reduce at ContaminationEstimator.scala:115, took 0.020915 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 5 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 16 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 15, ShuffleMapStage 14)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 16 (MapPartitionsRDD[20] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 4.4 KB, free 56.5 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 2.3 KB, free 58.7 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 16 (MapPartitionsRDD[20] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 4 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 16 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 5 finished: reduce at ContaminationEstimator.scala:115, took 0.016422 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 6 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 17, ShuffleMapStage 18)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[21] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.4 KB, free 63.1 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 65.4 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 19 (MapPartitionsRDD[21] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 19.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 37)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 36)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 38)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 19.0 (TID 39)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 38). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 37). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 36). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 19.0 (TID 39). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 38) in 5 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 37) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 36) in 8 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 19.0 (TID 39) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 19 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 6 finished: reduce at ContaminationEstimator.scala:115, took 0.020490 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 7 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20, ShuffleMapStage 21)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (MapPartitionsRDD[22] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.4 KB, free 69.7 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 72.0 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (MapPartitionsRDD[22] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 41)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 42)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 40)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 43)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 41). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 42). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 43). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 40). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 41) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 43) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 42) in 6 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 40) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 22 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 7 finished: reduce at ContaminationEstimator.scala:115, took 0.015208 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 8 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24, ShuffleMapStage 23)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[23] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 4.4 KB, free 76.4 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 2.3 KB, free 78.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 25 (MapPartitionsRDD[23] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 25.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 25.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 25.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 25.0 (TID 46)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 25.0 (TID 47)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 25.0 (TID 45)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 44)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 25.0 (TID 46). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 25.0 (TID 47). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 25.0 (TID 45). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 25.0 (TID 46) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 44). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 25.0 (TID 45) in 7 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 25.0 (TID 47) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 44) in 10 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 25 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 8 finished: reduce at ContaminationEstimator.scala:115, took 0.021794 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 9 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 28 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 27, ShuffleMapStage 26)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 28 (MapPartitionsRDD[24] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.4 KB, free 83.0 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 85.2 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 28 (MapPartitionsRDD[24] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 49)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 50)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 51)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 48)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 50). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 51). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 49). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 50) in 5 ms on localhost (1/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 48). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 51) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 49) in 8 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 48) in 9 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 28 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 9 finished: reduce at ContaminationEstimator.scala:115, took 0.020144 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 10 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30, ShuffleMapStage 29)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[25] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.4 KB, free 89.6 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 91.9 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 31 (MapPartitionsRDD[25] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 52, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 53, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 54, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 31.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 53)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 52)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 31.0 (TID 55)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 54)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 53). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 54). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 31.0 (TID 55). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 53) in 5 ms on localhost (1/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 52). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 54) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 31.0 (TID 55) in 6 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 52) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 31 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 10 finished: reduce at ContaminationEstimator.scala:115, took 0.016131 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 11 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 34 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 33, ShuffleMapStage 32)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 34 (MapPartitionsRDD[26] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.4 KB, free 96.2 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.3 KB, free 98.5 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 34 (MapPartitionsRDD[26] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 34.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 34.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 34.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 34.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 34.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 34.0 (TID 57)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 34.0 (TID 59)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 34.0 (TID 56)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 34.0 (TID 58)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 34.0 (TID 58). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 34.0 (TID 59). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 34.0 (TID 57). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 34.0 (TID 56). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 34.0 (TID 58) in 7 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 34.0 (TID 59) in 7 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 34.0 (TID 57) in 9 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 34.0 (TID 56) in 9 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 34.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 34 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 11 finished: reduce at ContaminationEstimator.scala:115, took 0.016134 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 12 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 37 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 35, ShuffleMapStage 36)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 37 (MapPartitionsRDD[27] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.4 KB, free 102.9 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 105.1 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 37 (MapPartitionsRDD[27] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 37.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 37.0 (TID 60, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 37.0 (TID 61, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 37.0 (TID 62, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 37.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 37.0 (TID 61)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 37.0 (TID 60)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 37.0 (TID 62)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 37.0 (TID 63)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 37.0 (TID 61). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 37.0 (TID 60). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 37.0 (TID 62). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 37.0 (TID 63). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 37.0 (TID 61) in 5 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 37.0 (TID 60) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 37.0 (TID 62) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 37.0 (TID 63) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 37 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 37.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 12 finished: reduce at ContaminationEstimator.scala:115, took 0.014340 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 13 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 40 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 38, ShuffleMapStage 39)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 40 (MapPartitionsRDD[28] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.4 KB, free 109.5 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 111.7 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 40 (MapPartitionsRDD[28] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 40.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 40.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 40.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 40.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 40.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 40.0 (TID 65)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 40.0 (TID 64)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 40.0 (TID 67)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 40.0 (TID 66)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 40.0 (TID 65). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 40.0 (TID 64). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 40.0 (TID 67). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 40.0 (TID 66). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 40.0 (TID 65) in 7 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 40.0 (TID 67) in 7 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 40.0 (TID 66) in 8 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 40.0 (TID 64) in 9 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 40.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 40 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 13 finished: reduce at ContaminationEstimator.scala:115, took 0.017550 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 14 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 43 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 42, ShuffleMapStage 41)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 43 (MapPartitionsRDD[29] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.4 KB, free 116.1 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.3 KB, free 118.4 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 43 (MapPartitionsRDD[29] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 43.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 43.0 (TID 68, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 43.0 (TID 69, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 43.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 43.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 43.0 (TID 70)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 43.0 (TID 68)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 43.0 (TID 69)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 43.0 (TID 71)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 43.0 (TID 70). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 43.0 (TID 71). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 43.0 (TID 68). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 43.0 (TID 69). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 43.0 (TID 70) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 43.0 (TID 71) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 43.0 (TID 68) in 6 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 43.0 (TID 69) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 43 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 43.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 14 finished: reduce at ContaminationEstimator.scala:115, took 0.018424 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 15 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 46 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 45, ShuffleMapStage 44)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 46 (MapPartitionsRDD[30] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.4 KB, free 122.7 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 125.0 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 46 (MapPartitionsRDD[30] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 46.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 46.0 (TID 72, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 46.0 (TID 73, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 46.0 (TID 74, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 46.0 (TID 75, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 46.0 (TID 72)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 46.0 (TID 73)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 46.0 (TID 74)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 46.0 (TID 75)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 46.0 (TID 72). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 46.0 (TID 73). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 46.0 (TID 75). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 46.0 (TID 74). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 46.0 (TID 72) in 4 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 46.0 (TID 73) in 4 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 46.0 (TID 75) in 4 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 46.0 (TID 74) in 5 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 46 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 46.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 15 finished: reduce at ContaminationEstimator.scala:115, took 0.010242 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 16 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 49 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 48, ShuffleMapStage 47)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 49 (MapPartitionsRDD[31] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.4 KB, free 129.4 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 131.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 49 (MapPartitionsRDD[31] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 49.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 49.0 (TID 76, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 49.0 (TID 77, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 49.0 (TID 78, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 49.0 (TID 79, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 49.0 (TID 76)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 49.0 (TID 79)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 49.0 (TID 77)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 49.0 (TID 78)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 49.0 (TID 79). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 49.0 (TID 78). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 49.0 (TID 77). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 49.0 (TID 76). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 49.0 (TID 79) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 49.0 (TID 77) in 7 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 49.0 (TID 76) in 9 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 49.0 (TID 78) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 49 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 49.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 16 finished: reduce at ContaminationEstimator.scala:115, took 0.014520 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 17 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 52 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 51, ShuffleMapStage 50)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 52 (MapPartitionsRDD[32] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 4.4 KB, free 136.0 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 2.3 KB, free 138.2 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 52 (MapPartitionsRDD[32] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 52.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 52.0 (TID 80, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 52.0 (TID 81, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 52.0 (TID 82, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 52.0 (TID 83, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 52.0 (TID 81)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 52.0 (TID 80)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 52.0 (TID 82)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 52.0 (TID 83)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 52.0 (TID 81). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 52.0 (TID 80). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 52.0 (TID 82). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 52.0 (TID 83). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 52.0 (TID 81) in 10 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 52.0 (TID 80) in 11 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 52.0 (TID 82) in 13 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 52.0 (TID 83) in 13 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 52 (reduce at ContaminationEstimator.scala:115) finished in 0.015 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 52.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 17 finished: reduce at ContaminationEstimator.scala:115, took 0.026388 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 18 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 55 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 53, ShuffleMapStage 54)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 55 (MapPartitionsRDD[33] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.4 KB, free 142.6 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 144.9 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 55 (MapPartitionsRDD[33] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 55.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 55.0 (TID 84, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 55.0 (TID 85, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 55.0 (TID 86, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 55.0 (TID 87, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 55.0 (TID 86)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 55.0 (TID 84)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 55.0 (TID 87)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 55.0 (TID 85)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 55.0 (TID 86). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 55.0 (TID 87). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 55.0 (TID 84). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 55.0 (TID 85). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 55.0 (TID 87) in 5 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 55.0 (TID 86) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 55.0 (TID 84) in 5 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 55.0 (TID 85) in 6 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 55 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 55.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 18 finished: reduce at ContaminationEstimator.scala:115, took 0.013129 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 19 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 58 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 56, ShuffleMapStage 57)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 58 (MapPartitionsRDD[34] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.4 KB, free 149.2 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 151.5 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 58 (MapPartitionsRDD[34] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 58.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 58.0 (TID 88, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 58.0 (TID 89, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 58.0 (TID 90, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 58.0 (TID 91, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 58.0 (TID 89)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 58.0 (TID 91)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 58.0 (TID 90)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 58.0 (TID 88)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 58.0 (TID 89). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 58.0 (TID 88). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 58.0 (TID 91). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 58.0 (TID 90). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 58.0 (TID 88) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 58.0 (TID 89) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 58.0 (TID 91) in 4 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 58.0 (TID 90) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 58 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 58.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 19 finished: reduce at ContaminationEstimator.scala:115, took 0.014091 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 20 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 61 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 60, ShuffleMapStage 59)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 61 (MapPartitionsRDD[35] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_24 stored as values in memory (estimated size 4.4 KB, free 155.9 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_24_piece0 stored as bytes in memory (estimated size 2.3 KB, free 158.1 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_24_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 24 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 61 (MapPartitionsRDD[35] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 61.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 61.0 (TID 92, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 61.0 (TID 93, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 61.0 (TID 94, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 61.0 (TID 95, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 61.0 (TID 92)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 61.0 (TID 93)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 61.0 (TID 95)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 61.0 (TID 94)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 229
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:44436 in memory (size: 2.5 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 61.0 (TID 92). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 61.0 (TID 94). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 61.0 (TID 95). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 61.0 (TID 93). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 61.0 (TID 92) in 16 ms on localhost (1/4)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 208
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 61.0 (TID 94) in 15 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 61.0 (TID 95) in 14 ms on localhost (3/4)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:44436 in memory (size: 2.2 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 61.0 (TID 93) in 16 ms on localhost (4/4)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 207
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 61.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 61 (reduce at ContaminationEstimator.scala:115) finished in 0.017 s
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned shuffle 0
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 20 finished: reduce at ContaminationEstimator.scala:115, took 0.024445 s
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 217
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 216
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 21 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 64 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 63, ShuffleMapStage 62)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 64 (MapPartitionsRDD[36] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 215
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_25 stored as values in memory (estimated size 4.4 KB, free 128.9 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 214
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_25_piece0 stored as bytes in memory (estimated size 2.3 KB, free 118.0 KB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 213
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_25_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 25 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 64 (MapPartitionsRDD[36] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 64.0 with 4 tasks
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 64.0 (TID 96, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 64.0 (TID 97, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 64.0 (TID 98, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 64.0 (TID 99, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 212
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 64.0 (TID 99)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 64.0 (TID 97)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 64.0 (TID 96)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 64.0 (TID 98)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:44436 in memory (size: 2.1 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 211
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 64.0 (TID 96). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 64.0 (TID 99). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:44436 in memory (size: 2.2 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 210
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 64.0 (TID 96) in 4 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 64.0 (TID 99) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:44436 in memory (size: 2.1 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 64.0 (TID 98). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 209
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 64.0 (TID 97). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_23_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 64.0 (TID 98) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_22_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 64.0 (TID 97) in 9 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 64 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 64.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 21 finished: reduce at ContaminationEstimator.scala:115, took 0.016225 s
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 228
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_21_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 227
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_20_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 226
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_19_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 225
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 22 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 67 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 66, ShuffleMapStage 65)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_18_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 67 (MapPartitionsRDD[37] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 224
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_17_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_26 stored as values in memory (estimated size 4.4 KB, free 51.7 KB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 223
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_16_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 222
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_15_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 221
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_26_piece0 stored as bytes in memory (estimated size 2.3 KB, free 40.7 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_26_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 26 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 67 (MapPartitionsRDD[37] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 67.0 with 4 tasks
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 220
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 67.0 (TID 100, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 67.0 (TID 101, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 219
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 67.0 (TID 102, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 67.0 (TID 103, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:44436 in memory (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 67.0 (TID 100)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 67.0 (TID 101)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 67.0 (TID 103)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 67.0 (TID 102)
19/02/28 21:14:24 INFO spark.ContextCleaner: Cleaned accumulator 218
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 67.0 (TID 102). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 67.0 (TID 103). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 67.0 (TID 101). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 67.0 (TID 102) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 67.0 (TID 103) in 6 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 67.0 (TID 101) in 8 ms on localhost (3/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 67.0 (TID 100). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 67.0 (TID 100) in 13 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 67 (reduce at ContaminationEstimator.scala:115) finished in 0.014 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 67.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 22 finished: reduce at ContaminationEstimator.scala:115, took 0.023696 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 23 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 70 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 68, ShuffleMapStage 69)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 70 (MapPartitionsRDD[38] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_27 stored as values in memory (estimated size 4.4 KB, free 25.2 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_27_piece0 stored as bytes in memory (estimated size 2.3 KB, free 27.5 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_27_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 27 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 70 (MapPartitionsRDD[38] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 70.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 70.0 (TID 104, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 70.0 (TID 105, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 70.0 (TID 106, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 70.0 (TID 107, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 70.0 (TID 105)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 70.0 (TID 107)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 70.0 (TID 106)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 70.0 (TID 104)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 70.0 (TID 105). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 70.0 (TID 104). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 70.0 (TID 107). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 70.0 (TID 106). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 70.0 (TID 105) in 4 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 70.0 (TID 107) in 4 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 70.0 (TID 106) in 4 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 70.0 (TID 104) in 5 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 70 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 70.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 23 finished: reduce at ContaminationEstimator.scala:115, took 0.011895 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 24 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 73 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 71, ShuffleMapStage 72)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 73 (MapPartitionsRDD[39] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_28 stored as values in memory (estimated size 4.4 KB, free 31.8 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_28_piece0 stored as bytes in memory (estimated size 2.3 KB, free 34.1 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_28_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 28 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 73 (MapPartitionsRDD[39] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 73.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 73.0 (TID 108, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 73.0 (TID 109, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 73.0 (TID 110, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 73.0 (TID 111, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 73.0 (TID 108)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 73.0 (TID 109)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 73.0 (TID 111)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 73.0 (TID 110)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 73.0 (TID 108). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 73.0 (TID 109). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 73.0 (TID 108) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 73.0 (TID 109) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 73.0 (TID 111). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 73.0 (TID 110). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 73.0 (TID 110) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 73 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 73.0 (TID 111) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 73.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 24 finished: reduce at ContaminationEstimator.scala:115, took 0.015445 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 25 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 76 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 74, ShuffleMapStage 75)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 76 (MapPartitionsRDD[40] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_29 stored as values in memory (estimated size 4.4 KB, free 38.5 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_29_piece0 stored as bytes in memory (estimated size 2.3 KB, free 40.7 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_29_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 29 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 76 (MapPartitionsRDD[40] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 76.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 76.0 (TID 112, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 76.0 (TID 113, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 76.0 (TID 114, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 76.0 (TID 115, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 76.0 (TID 114)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 76.0 (TID 115)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 76.0 (TID 112)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 76.0 (TID 113)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 76.0 (TID 114). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 76.0 (TID 115). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 76.0 (TID 114) in 4 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 76.0 (TID 115) in 5 ms on localhost (2/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 76.0 (TID 112). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 76.0 (TID 113). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 76.0 (TID 112) in 6 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 76.0 (TID 113) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 76 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 76.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 25 finished: reduce at ContaminationEstimator.scala:115, took 0.014429 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 26 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 79 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 78, ShuffleMapStage 77)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 79 (MapPartitionsRDD[41] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_30 stored as values in memory (estimated size 4.4 KB, free 45.1 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_30_piece0 stored as bytes in memory (estimated size 2.3 KB, free 47.3 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_30_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 30 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 79 (MapPartitionsRDD[41] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 79.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 79.0 (TID 116, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 79.0 (TID 117, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 79.0 (TID 118, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 79.0 (TID 119, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 79.0 (TID 116)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 79.0 (TID 118)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 79.0 (TID 119)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 79.0 (TID 117)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 79.0 (TID 116). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 79.0 (TID 117). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 79.0 (TID 119). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 79.0 (TID 118). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 79.0 (TID 116) in 7 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 79.0 (TID 117) in 8 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 79.0 (TID 119) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 79 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 79.0 (TID 118) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 79.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 26 finished: reduce at ContaminationEstimator.scala:115, took 0.019600 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 27 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 82 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 81, ShuffleMapStage 80)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 82 (MapPartitionsRDD[42] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_31 stored as values in memory (estimated size 4.4 KB, free 51.7 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_31_piece0 stored as bytes in memory (estimated size 2.3 KB, free 54.0 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_31_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 31 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 82 (MapPartitionsRDD[42] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 82.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 82.0 (TID 120, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 82.0 (TID 121, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 82.0 (TID 122, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 82.0 (TID 123, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 82.0 (TID 121)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 82.0 (TID 120)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 82.0 (TID 122)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 82.0 (TID 123)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 82.0 (TID 121). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 82.0 (TID 122). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 82.0 (TID 123). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 82.0 (TID 120). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 82.0 (TID 121) in 6 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 82.0 (TID 122) in 7 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 82.0 (TID 123) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 82.0 (TID 120) in 8 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 82 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 82.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 27 finished: reduce at ContaminationEstimator.scala:115, took 0.014759 s
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 28 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 85 (reduce at ContaminationEstimator.scala:115)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 84, ShuffleMapStage 83)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 85 (MapPartitionsRDD[43] at map at ContaminationEstimator.scala:114), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_32 stored as values in memory (estimated size 4.4 KB, free 58.3 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_32_piece0 stored as bytes in memory (estimated size 2.3 KB, free 60.6 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_32_piece0 in memory on localhost:44436 (size: 2.3 KB, free: 521.2 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 32 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 85 (MapPartitionsRDD[43] at map at ContaminationEstimator.scala:114)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 85.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 85.0 (TID 124, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 85.0 (TID 125, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 85.0 (TID 126, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 85.0 (TID 127, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 85.0 (TID 124)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 85.0 (TID 127)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 85.0 (TID 125)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 85.0 (TID 126)
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_0 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_3 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_1 locally
19/02/28 21:14:24 INFO storage.BlockManager: Found block rdd_16_2 locally
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 85.0 (TID 124). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 85.0 (TID 127). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 85.0 (TID 124) in 5 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 85.0 (TID 127) in 4 ms on localhost (2/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 85.0 (TID 125). 2058 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 85.0 (TID 126). 2066 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 85.0 (TID 125) in 7 ms on localhost (3/4)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ResultStage 85 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 85.0 (TID 126) in 7 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 85.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Job 28 finished: reduce at ContaminationEstimator.scala:115, took 0.014880 s
19/02/28 21:14:24 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/02/28 21:14:24 INFO storage.MemoryStore: MemoryStore cleared
19/02/28 21:14:24 INFO storage.BlockManager: BlockManager stopped
19/02/28 21:14:24 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/02/28 21:14:24 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/02/28 21:14:24 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/02/28 21:14:24 INFO spark.SparkContext: Successfully stopped SparkContext
19/02/28 21:14:24 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
- estimate contamination from a read dataset with 10% contamination reads
19/02/28 21:14:24 INFO spark.SparkContext: Running Spark version 1.6.1
19/02/28 21:14:24 INFO spark.SecurityManager: Changing view acls to: jenkins
19/02/28 21:14:24 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/02/28 21:14:24 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/02/28 21:14:24 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/02/28 21:14:24 INFO util.Utils: Successfully started service 'sparkDriver' on port 51920.
19/02/28 21:14:24 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/02/28 21:14:24 INFO Remoting: Starting remoting
19/02/28 21:14:24 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:51921]
19/02/28 21:14:24 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 51921.
19/02/28 21:14:24 INFO spark.SparkEnv: Registering MapOutputTracker
19/02/28 21:14:24 INFO spark.SparkEnv: Registering BlockManagerMaster
19/02/28 21:14:24 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-e56c1bea-bf1f-44a8-99d1-801a6b78e06e
19/02/28 21:14:24 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/02/28 21:14:24 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/02/28 21:14:24 INFO executor.Executor: Starting executor ID driver on host localhost
19/02/28 21:14:24 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 41067.
19/02/28 21:14:24 INFO netty.NettyBlockTransferService: Server created on 41067
19/02/28 21:14:24 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/02/28 21:14:24 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:41067 with 521.6 MB RAM, BlockManagerId(driver, localhost, 41067)
19/02/28 21:14:24 INFO storage.BlockManagerMaster: Registered BlockManager
19/02/28 21:14:24 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Got job 0 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (collect at BroadcastRegionJoin.scala:100)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 4.1 KB, free 4.1 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 2.2 KB, free 6.3 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:41067 (size: 2.2 KB, free: 521.6 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2082 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2128 bytes)
19/02/28 21:14:24 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/02/28 21:14:24 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/02/28 21:14:24 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/02/28 21:14:24 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/02/28 21:14:24 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 12 ms on localhost (1/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 11 ms on localhost (2/4)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 10 ms on localhost (3/4)
19/02/28 21:14:24 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 13 ms on localhost (4/4)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/02/28 21:14:24 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.018 s
19/02/28 21:14:24 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/02/28 21:14:24 INFO scheduler.DAGScheduler: running: Set()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/02/28 21:14:24 INFO scheduler.DAGScheduler: failed: Set()
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.9 KB, free 11.2 KB)
19/02/28 21:14:24 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.5 KB, free 13.7 KB)
19/02/28 21:14:24 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:41067 (size: 2.5 KB, free: 521.6 MB)
19/02/28 21:14:24 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/02/28 21:14:24 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99)
19/02/28 21:14:24 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:24 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/02/28 21:14:24 INFO executor.Executor: Run