SuccessConsole Output

Started by upstream project "quinine" build number 3927
originally caused by:
 Started by upstream project "ADAM" build number 4192
 originally caused by:
  Started by upstream project "bdg-formats" build number 1759
  originally caused by:
   Started by timer
[EnvInject] - Loading node environment variables.
Building remotely on amp-jenkins-worker-02 (spark-compile centos spark-test) in workspace /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos
Cloning the remote Git repository
Cloning repository https://github.com/bigdatagenomics/quinine.git
 > git init /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos # timeout=10
Fetching upstream changes from https://github.com/bigdatagenomics/quinine.git
 > git --version # timeout=10
 > git fetch --tags --progress https://github.com/bigdatagenomics/quinine.git +refs/heads/*:refs/remotes/origin/*
 > git config remote.origin.url https://github.com/bigdatagenomics/quinine.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/bigdatagenomics/quinine.git # timeout=10
Fetching upstream changes from https://github.com/bigdatagenomics/quinine.git
 > git fetch --tags --progress https://github.com/bigdatagenomics/quinine.git +refs/heads/*:refs/remotes/origin/*
Checking out Revision 31b91e2d60ebedf732f8cf34d3dc1bf78bb428af (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 31b91e2d60ebedf732f8cf34d3dc1bf78bb428af
 > git rev-list 31b91e2d60ebedf732f8cf34d3dc1bf78bb428af # timeout=10
[centos] $ /home/jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1/bin/mvn -Dlabel=centos -Dhadoop.version=1.0.4 clean package
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.quinine:quinine-core_2.10:jar:0.0.3-SNAPSHOT
[WARNING] 'dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 370, column 25
[WARNING] 'dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 374, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 370, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 374, column 25
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.quinine:quinine-cli_2.10:jar:0.0.3-SNAPSHOT
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 370, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.quinine:quinine-parent_2.10:0.0.3-SNAPSHOT, /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/pom.xml, line 374, column 25
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.quinine:quinine-parent_2.10:pom:0.0.3-SNAPSHOT
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 370, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 374, column 25
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Build Order:
[INFO] 
[INFO] quinine
[INFO] quinine: Core
[INFO] quinine: CLI
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building quinine 0.0.3-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.6.1:clean (default-clean) @ quinine-parent_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ quinine-parent_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ quinine-parent_2.10 ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ quinine-parent_2.10 ---
[INFO] Modified 0 of 54 .scala files
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ quinine-parent_2.10 ---
[INFO] No sources to compile
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ quinine-parent_2.10 ---
[INFO] No sources to compile
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building quinine: Core 0.0.3-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.6.1:clean (default-clean) @ quinine-core_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ quinine-core_2.10 ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ quinine-core_2.10 ---
[INFO] 
[INFO] --- build-helper-maven-plugin:1.9.1:add-source (add-source) @ quinine-core_2.10 ---
[INFO] Source directory: /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/main/scala added.
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ quinine-core_2.10 ---
[INFO] Modified 0 of 41 .scala files
[INFO] 
[INFO] --- maven-resources-plugin:2.7:resources (default-resources) @ quinine-core_2.10 ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/main/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ quinine-core_2.10 ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.4
[WARNING]  com.twitter:chill_2.10:0.5.0 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-remote_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-actor_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-slf4j_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  org.apache.spark:spark-core_2.10:1.6.1 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-jackson_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-ast_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.0
[WARNING] Multiple versions of scala libraries detected!
[INFO] /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/main/scala:-1: info: compiling
[INFO] Compiling 24 source files to /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/classes at 1551430349914
[WARNING] warning: there were 2 feature warning(s); re-run with -feature for details
[WARNING] one warning found
[INFO] prepare-compile in 0 s
[INFO] compile in 13 s
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ quinine-core_2.10 ---
[INFO] Nothing to compile - all classes are up to date
[INFO] 
[INFO] --- build-helper-maven-plugin:1.9.1:add-test-source (add-test-source) @ quinine-core_2.10 ---
[INFO] Test Source directory: /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/test/scala added.
[INFO] 
[INFO] --- maven-resources-plugin:2.7:testResources (default-testResources) @ quinine-core_2.10 ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] 
[INFO] --- scala-maven-plugin:3.2.2:testCompile (scala-test-compile-first) @ quinine-core_2.10 ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.4
[WARNING]  com.twitter:chill_2.10:0.5.0 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-remote_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-actor_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  com.typesafe.akka:akka-slf4j_2.10:2.3.11 requires scala version: 2.10.4
[WARNING]  org.apache.spark:spark-core_2.10:1.6.1 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-jackson_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-ast_2.10:3.2.10 requires scala version: 2.10.4
[WARNING]  org.json4s:json4s-core_2.10:3.2.10 requires scala version: 2.10.0
[WARNING] Multiple versions of scala libraries detected!
[INFO] /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/src/test/scala:-1: info: compiling
[INFO] Compiling 17 source files to /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes at 1551430364390
[INFO] prepare-compile in 0 s
[INFO] compile in 16 s
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:testCompile (default-testCompile) @ quinine-core_2.10 ---
[INFO] Nothing to compile - all classes are up to date
[INFO] 
[INFO] --- maven-surefire-plugin:2.18.1:test (default-test) @ quinine-core_2.10 ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- scalatest-maven-plugin:1.0:test (test) @ quinine-core_2.10 ---
Discovery starting.
Discovery completed in 518 milliseconds.
Run starting. Expected test count is: 74
RNASeqPanelStatsSuite:
19/03/01 00:53:02 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:02 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:02 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:02 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:02 INFO util.Utils: Successfully started service 'sparkDriver' on port 53104.
19/03/01 00:53:03 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:03 INFO Remoting: Starting remoting
19/03/01 00:53:03 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@192.168.10.22:53105]
19/03/01 00:53:03 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 53105.
19/03/01 00:53:03 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:03 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:03 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-f7f06c75-2303-4c8a-abdb-1a67f81ab7fb
19/03/01 00:53:03 INFO storage.MemoryStore: MemoryStore started with capacity 511.1 MB
19/03/01 00:53:03 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:03 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:03 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 43942.
19/03/01 00:53:03 INFO netty.NettyBlockTransferService: Server created on 43942
19/03/01 00:53:03 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:03 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:43942 with 511.1 MB RAM, BlockManagerId(driver, localhost, 43942)
19/03/01 00:53:03 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:03 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/03/01 00:53:03 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/03/01 00:53:03 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/03/01 00:53:03 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:03 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:03 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:43942 (size: 1324.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79)
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2023 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:04 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:04 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:04 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:04 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_0_0 not found, computing it
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_0_1 not found, computing it
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_0_2 not found, computing it
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_0_3 not found, computing it
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_0_0 stored as values in memory (estimated size 16.0 B, free 3.4 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_0_0 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_0_3 stored as values in memory (estimated size 352.0 B, free 3.7 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_0_1 stored as values in memory (estimated size 352.0 B, free 4.0 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_0_3 in memory on localhost:43942 (size: 352.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_0_2 stored as values in memory (estimated size 352.0 B, free 4.4 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_0_1 in memory on localhost:43942 (size: 352.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_0_2 in memory on localhost:43942 (size: 352.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1548 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1488 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1548 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1548 bytes result sent to driver
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 148 ms on localhost (1/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 132 ms on localhost (2/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 110 ms on localhost (3/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 118 ms on localhost (4/4)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.181 s
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.526894 s
19/03/01 00:53:04 INFO spark.SparkContext: Starting job: collect at RightOuterJoin.scala:77
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at RightOuterJoin.scala:75)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Got job 1 (collect at RightOuterJoin.scala:77) with 4 output partitions
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (collect at RightOuterJoin.scala:77)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75), which has no missing parents
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.0 KB, free 8.4 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.1 KB, free 10.5 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:43942 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:04 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75)
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:43942 in memory (size: 1324.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:04 INFO spark.ContextCleaner: Cleaned accumulator 1
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:04 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:04 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:04 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:04 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_1_0 not found, computing it
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_1_2 not found, computing it
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_1_0 stored as values in memory (estimated size 16.0 B, free 7.2 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_1_2 stored as values in memory (estimated size 16.0 B, free 7.2 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_1_0 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_1_2 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_1_1 not found, computing it
19/03/01 00:53:04 INFO spark.CacheManager: Partition rdd_1_3 not found, computing it
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_1_1 stored as values in memory (estimated size 16.0 B, free 7.2 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_1_1 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block rdd_1_3 stored as values in memory (estimated size 4.7 KB, free 11.9 KB)
19/03/01 00:53:04 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1670 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1670 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1670 bytes result sent to driver
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added rdd_1_3 in memory on localhost:43942 (size: 4.7 KB, free: 511.1 MB)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 96 ms on localhost (1/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 78 ms on localhost (2/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 86 ms on localhost (3/4)
19/03/01 00:53:04 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1670 bytes result sent to driver
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 120 ms on localhost (4/4)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at RightOuterJoin.scala:75) finished in 0.146 s
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:04 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:04 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:04 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76), which has no missing parents
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.8 KB, free 16.7 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 19.1 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:43942 (size: 2.5 KB, free: 511.1 MB)
19/03/01 00:53:04 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76)
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:04 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:04 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:04 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:04 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/03/01 00:53:04 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 5 ms
19/03/01 00:53:04 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1228 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 78 ms on localhost (1/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 75 ms on localhost (2/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 75 ms on localhost (3/4)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 77 ms on localhost (4/4)
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:04 INFO scheduler.DAGScheduler: ResultStage 2 (collect at RightOuterJoin.scala:77) finished in 0.082 s
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Job 1 finished: collect at RightOuterJoin.scala:77, took 0.328231 s
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 216.0 B, free 19.4 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 124.0 B, free 19.5 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:43942 (size: 124.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO spark.SparkContext: Created broadcast 3 from broadcast at RightOuterJoin.scala:86
19/03/01 00:53:04 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Registering RDD 9 (map at RightOuterJoin.scala:90)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at RightOuterJoin.scala:94)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Got job 2 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90), which has no missing parents
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.4 KB, free 22.9 KB)
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2039.0 B, free 24.8 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:43942 (size: 2039.0 B, free: 511.1 MB)
19/03/01 00:53:04 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90)
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94), which has no missing parents
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.7 KB, free 28.5 KB)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:04 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 30.6 KB)
19/03/01 00:53:04 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:43942 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:04 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:04 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94)
19/03/01 00:53:04 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:04 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:04 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:04 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:04 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:04 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:04 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:04 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:04 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:04 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/03/01 00:53:04 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/03/01 00:53:04 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:04 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 66 ms on localhost (1/4)
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_0_0 locally
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 87 ms on localhost (2/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_0_1 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 92 ms on localhost (3/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_0_2 locally
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 87 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (map at RightOuterJoin.scala:90) finished in 0.107 s
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 47 ms on localhost (1/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_0_3 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 72 ms on localhost (2/4)
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 91 ms on localhost (3/4)
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 91 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (flatMap at RightOuterJoin.scala:94) finished in 0.153 s
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.8 KB, free 34.5 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2047.0 B, free 36.5 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:43942 (size: 2047.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 20)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 23)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 21)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 22)
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_14_3 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_14_1 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_14_0 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_14_2 not found, computing it
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_14_2 stored as values in memory (estimated size 16.0 B, free 36.5 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_14_0 stored as values in memory (estimated size 16.0 B, free 36.5 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_14_2 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_14_3 stored as values in memory (estimated size 16.0 B, free 36.5 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_14_0 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_14_3 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 22). 1704 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 20). 1704 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 23). 1704 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 22) in 63 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 20) in 66 ms on localhost (2/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 23) in 66 ms on localhost (3/4)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_14_1 stored as values in memory (estimated size 5.7 KB, free 42.2 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_14_1 in memory on localhost:43942 (size: 5.7 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 21). 1767 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 21) in 87 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.089 s
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Job 2 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.316658 s
19/03/01 00:53:05 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:43
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Got job 3 (count at TranscriptCounts.scala:43) with 4 output partitions
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at TranscriptCounts.scala:43)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 1808.0 B, free 44.0 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1186.0 B, free 45.1 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:43942 (size: 1186.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 24)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 26)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 27)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 25)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 26). 2057 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 25). 2057 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 24). 2057 bytes result sent to driver
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 26) in 35 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 24) in 46 ms on localhost (2/4)
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 27). 2057 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 25) in 43 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 27) in 42 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ResultStage 6 (count at TranscriptCounts.scala:43) finished in 0.056 s
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Job 3 finished: count at TranscriptCounts.scala:43, took 0.077400 s
19/03/01 00:53:05 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:51
19/03/01 00:53:05 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 162 bytes
19/03/01 00:53:05 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Registering RDD 19 (distinct at TranscriptCounts.scala:50)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Got job 4 (count at TranscriptCounts.scala:51) with 4 output partitions
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (count at TranscriptCounts.scala:51)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 9)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.0 KB, free 49.1 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.1 KB, free 51.2 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:43942 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 29)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 28)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 31)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 30)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_14_1 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_14_3 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_14_2 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_14_0 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 28). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 29). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 31). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 30). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 28) in 38 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 29) in 38 ms on localhost (2/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 31) in 37 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 9 (distinct at TranscriptCounts.scala:50) finished in 0.041 s
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 30) in 39 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 10)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.1 KB, free 54.3 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1856.0 B, free 56.1 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:43942 (size: 1856.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 32, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 33, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 32)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 35)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 34)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 33)
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 34). 1123 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 32). 1123 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 33). 1123 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 35). 1123 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 34) in 18 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 32) in 21 ms on localhost (2/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 35) in 19 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 33) in 21 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ResultStage 10 (count at TranscriptCounts.scala:51) finished in 0.022 s
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Job 4 finished: count at TranscriptCounts.scala:51, took 0.109796 s
19/03/01 00:53:05 INFO rdd.ParallelCollectionRDD: Removing RDD 0 from persistence list
19/03/01 00:53:05 INFO storage.BlockManager: Removing RDD 0
19/03/01 00:53:05 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Registering RDD 28 (keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Got job 5 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Final stage: ResultStage 12 (collect at BroadcastRegionJoin.scala:100)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 11)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 11)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.2 KB, free 59.3 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.2 KB, free 61.5 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:43942 (size: 2.2 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:43942 in memory (size: 1186.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 4 tasks
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:43942 in memory (size: 1856.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 9
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:43942 in memory (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 8
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 7
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:43942 in memory (size: 2047.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 6
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:43942 in memory (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 5
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:43942 in memory (size: 2039.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 4
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:43942 in memory (size: 2.5 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 3
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 11.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:43942 in memory (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 36)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 11.0 (TID 39)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 38)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 37)
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned accumulator 2
19/03/01 00:53:05 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 38). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 37). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 37) in 29 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 38) in 27 ms on localhost (2/4)
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 36). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 11.0 (TID 39). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 36) in 44 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 11.0 (TID 39) in 37 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 11 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.049 s
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 12)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 5.0 KB, free 22.2 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.5 KB, free 24.7 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:43942 (size: 2.5 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 40, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 41, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 42, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 43, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 40)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 41)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 42)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 43)
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 40). 1124 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 43). 1124 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 42). 1228 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 41). 1124 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 40) in 22 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 43) in 19 ms on localhost (2/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 41) in 22 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 42) in 25 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ResultStage 12 (collect at BroadcastRegionJoin.scala:100) finished in 0.027 s
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Job 5 finished: collect at BroadcastRegionJoin.scala:100, took 0.130997 s
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 216.0 B, free 24.9 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 124.0 B, free 25.0 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:43942 (size: 124.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 12 from broadcast at BroadcastRegionJoin.scala:109
19/03/01 00:53:05 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Registering RDD 22 (flatMap at ReadCoverage.scala:59)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Registering RDD 32 (flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Registering RDD 30 (map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Registering RDD 39 (map at CoverageStats.scala:172)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Got job 6 (collect at CoverageStats.scala:174) with 4 output partitions
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (collect at CoverageStats.scala:174)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 2.7 KB, free 27.8 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 1677.0 B, free 29.4 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:43942 (size: 1677.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 3.6 KB, free 33.0 KB)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.1 KB, free 35.1 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:43942 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 44)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 45)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 47)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 46)
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 44). 1090 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 48)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 44) in 36 ms on localhost (1/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 48). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 49)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 48) in 22 ms on localhost (1/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 49). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 50)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 49) in 21 ms on localhost (2/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 50). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 15.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 15.0 (TID 51)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 50) in 22 ms on localhost (3/4)
19/03/01 00:53:05 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 15.0 (TID 51). 2240 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 15.0 (TID 51) in 28 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 15 (map at BroadcastRegionJoin.scala:113) finished in 0.085 s
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 13)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 45). 1090 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 46). 1090 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 47). 1090 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 47) in 125 ms on localhost (2/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 46) in 129 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 45) in 133 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 13 (flatMap at ReadCoverage.scala:59) finished in 0.140 s
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.3 KB, free 39.4 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.4 KB, free 41.8 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:43942 (size: 2.4 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 14.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 14.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 14.0 (TID 53, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 14.0 (TID 54, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 14.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 14.0 (TID 52)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 14.0 (TID 55)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 14.0 (TID 54)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 14.0 (TID 53)
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_23_0 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_23_1 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_23_2 not found, computing it
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_23_3 not found, computing it
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_23_1 stored as values in memory (estimated size 16.0 B, free 41.8 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_23_1 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_23_3 stored as values in memory (estimated size 16.0 B, free 41.9 KB)
19/03/01 00:53:05 INFO executor.Executor: Finished task 1.0 in stage 14.0 (TID 54). 1886 bytes result sent to driver
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_23_3 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 14.0 (TID 55). 1886 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 14.0 (TID 54) in 21 ms on localhost (1/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 14.0 (TID 55) in 22 ms on localhost (2/4)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_23_0 stored as values in memory (estimated size 17.1 KB, free 59.0 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_23_0 in memory on localhost:43942 (size: 17.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_23_2 stored as values in memory (estimated size 17.1 KB, free 76.1 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_23_2 in memory on localhost:43942 (size: 17.1 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 14.0 (TID 53). 1886 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 14.0 (TID 52). 1886 bytes result sent to driver
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 14.0 (TID 52) in 121 ms on localhost (3/4)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 14.0 (TID 53) in 121 ms on localhost (4/4)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 14.0, whose tasks have all completed, from pool 
19/03/01 00:53:05 INFO scheduler.DAGScheduler: ShuffleMapStage 14 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.122 s
19/03/01 00:53:05 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:05 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/03/01 00:53:05 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172), which has no missing parents
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.1 KB, free 80.2 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.2 KB, free 82.3 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:43942 (size: 2.2 KB, free: 511.1 MB)
19/03/01 00:53:05 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:05 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172)
19/03/01 00:53:05 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:05 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 56)
19/03/01 00:53:05 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 59)
19/03/01 00:53:05 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 57)
19/03/01 00:53:05 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 58)
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_37_1 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_37_3 not found, computing it
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_37_0 not found, computing it
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO spark.CacheManager: Partition rdd_37_2 not found, computing it
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:05 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_37_3 stored as values in memory (estimated size 16.0 B, free 82.4 KB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_37_0 stored as values in memory (estimated size 16.0 B, free 82.4 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_37_3 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_37_0 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO storage.MemoryStore: Block rdd_37_2 stored as values in memory (estimated size 16.0 B, free 82.4 KB)
19/03/01 00:53:05 INFO storage.BlockManagerInfo: Added rdd_37_2 in memory on localhost:43942 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:05 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 59). 1886 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 56). 1886 bytes result sent to driver
19/03/01 00:53:05 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 58). 1886 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 59) in 23 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 56) in 25 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 58) in 23 ms on localhost (3/4)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_37_1 stored as values in memory (estimated size 45.8 KB, free 128.2 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_37_1 in memory on localhost:43942 (size: 45.8 KB, free: 511.0 MB)
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 57). 1886 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 57) in 83 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (map at CoverageStats.scala:172) finished in 0.084 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 2.5 KB, free 130.8 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 1554.0 B, free 132.3 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:43942 (size: 1554.0 B, free: 511.0 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 17.0 (TID 60, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 61, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 17.0 (TID 62, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 17.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 61)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 17.0 (TID 62)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 17.0 (TID 63)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 17.0 (TID 60)
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 61). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 17.0 (TID 62). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 17.0 (TID 63). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 17.0 (TID 60). 1131 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 61) in 13 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 17.0 (TID 62) in 14 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 17.0 (TID 63) in 14 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 17.0 (TID 60) in 16 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 17 (collect at CoverageStats.scala:174) finished in 0.016 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 6 finished: collect at CoverageStats.scala:174, took 0.413161 s
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/03/01 00:53:06 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 8 is 158 bytes
19/03/01 00:53:06 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 161 bytes
19/03/01 00:53:06 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 42 (map at CoverageStats.scala:172)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 7 (collect at CoverageStats.scala:174) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (collect at CoverageStats.scala:174)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 21)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 21)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.2 KB, free 136.5 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.2 KB, free 138.7 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:43942 (size: 2.2 KB, free: 511.0 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 21.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 21.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 21.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 21.0 (TID 67)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 21.0 (TID 65)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 21.0 (TID 66)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 64)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_37_2 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_37_3 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_37_0 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_37_1 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 64). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 21.0 (TID 67). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 21.0 (TID 66). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 21.0 (TID 67) in 22 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 21.0 (TID 66) in 24 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 64) in 28 ms on localhost (3/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 21.0 (TID 65). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 21.0 (TID 65) in 35 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 21 (map at CoverageStats.scala:172) finished in 0.037 s
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 22)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 2.5 KB, free 141.2 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 1554.0 B, free 142.7 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:43942 (size: 1554.0 B, free: 511.0 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 68, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 69, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 69)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 70)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 71)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 68)
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 68). 1131 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 69). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 71). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 68) in 15 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 71) in 13 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 69) in 14 ms on localhost (3/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 70). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 70) in 18 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 22 (collect at CoverageStats.scala:174) finished in 0.020 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 7 finished: collect at CoverageStats.scala:174, took 0.087783 s
19/03/01 00:53:06 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:06 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:06 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:06 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:06 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:06 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:06 INFO spark.SparkContext: Running Spark version 1.6.1
- single transcript, with reads at the start, middle, and end
19/03/01 00:53:06 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:06 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:06 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:06 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:06 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:06 INFO util.Utils: Successfully started service 'sparkDriver' on port 53999.
19/03/01 00:53:06 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:06 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:06 INFO Remoting: Starting remoting
19/03/01 00:53:06 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54000]
19/03/01 00:53:06 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54000.
19/03/01 00:53:06 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:06 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:06 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-f75a49d2-eac2-46d4-bcbd-b6f71ede54d9
19/03/01 00:53:06 INFO storage.MemoryStore: MemoryStore started with capacity 511.1 MB
19/03/01 00:53:06 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:06 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:06 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 41348.
19/03/01 00:53:06 INFO netty.NettyBlockTransferService: Server created on 41348
19/03/01 00:53:06 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:06 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:41348 with 511.1 MB RAM, BlockManagerId(driver, localhost, 41348)
19/03/01 00:53:06 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:41348 (size: 1324.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2157 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_0_3 not found, computing it
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_0_0 not found, computing it
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_0_3 stored as values in memory (estimated size 632.0 B, free 4.0 KB)
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_0_1 not found, computing it
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_0_2 not found, computing it
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_0_3 in memory on localhost:41348 (size: 632.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_0_0 stored as values in memory (estimated size 352.0 B, free 4.3 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_0_1 stored as values in memory (estimated size 352.0 B, free 4.6 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_0_0 in memory on localhost:41348 (size: 352.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_0_2 stored as values in memory (estimated size 352.0 B, free 5.0 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_0_1 in memory on localhost:41348 (size: 352.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_0_2 in memory on localhost:41348 (size: 352.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1548 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1548 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1548 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1548 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 24 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 27 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 32 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 29 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.033 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.072046 s
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: collect at RightOuterJoin.scala:77
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at RightOuterJoin.scala:75)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 1 (collect at RightOuterJoin.scala:77) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (collect at RightOuterJoin.scala:77)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.0 KB, free 9.0 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.1 KB, free 11.1 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:41348 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_1_0 not found, computing it
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_1_2 not found, computing it
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_1_0 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_1_0 in memory on localhost:41348 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_1_2 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_1_3 not found, computing it
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_1_2 in memory on localhost:41348 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_1_1 not found, computing it
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_1_3 stored as values in memory (estimated size 4.7 KB, free 15.9 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_1_3 in memory on localhost:41348 (size: 4.7 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_1_1 stored as values in memory (estimated size 4.7 KB, free 20.6 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_1_1 in memory on localhost:41348 (size: 4.7 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1670 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1670 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 23 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 17 ms on localhost (2/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1670 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1670 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 30 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 35 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at RightOuterJoin.scala:75) finished in 0.039 s
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.8 KB, free 25.3 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 27.8 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:41348 (size: 2.5 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1239 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 18 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 17 ms on localhost (2/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 20 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 23 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 2 (collect at RightOuterJoin.scala:77) finished in 0.025 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 1 finished: collect at RightOuterJoin.scala:77, took 0.085719 s
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 232.0 B, free 28.0 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 128.0 B, free 28.1 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:41348 (size: 128.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 3 from broadcast at RightOuterJoin.scala:86
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 9 (map at RightOuterJoin.scala:90)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at RightOuterJoin.scala:94)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 2 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.4 KB, free 31.5 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2039.0 B, free 33.5 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:41348 (size: 2039.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94), which has no missing parents
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.7 KB, free 37.2 KB)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 39.3 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:41348 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 24 ms on localhost (1/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 20 ms on localhost (2/4)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_0_0 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_0_1 locally
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_0_2 locally
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 26 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 33 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (map at RightOuterJoin.scala:90) finished in 0.036 s
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_0_3 locally
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 20 ms on localhost (1/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 26 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 20 ms on localhost (3/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 24 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (flatMap at RightOuterJoin.scala:94) finished in 0.044 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.8 KB, free 43.1 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2047.0 B, free 45.1 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:41348 (size: 2047.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 21)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 23)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 20)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 22)
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_14_3 not found, computing it
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_14_1 not found, computing it
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_14_0 not found, computing it
19/03/01 00:53:06 INFO spark.CacheManager: Partition rdd_14_2 not found, computing it
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_14_0 stored as values in memory (estimated size 392.0 B, free 45.5 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_14_3 stored as values in memory (estimated size 16.0 B, free 45.5 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_14_0 in memory on localhost:41348 (size: 392.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_14_3 in memory on localhost:41348 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_14_2 stored as values in memory (estimated size 16.0 B, free 45.5 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_14_2 in memory on localhost:41348 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 20). 1767 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 23). 1704 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 22). 1704 bytes result sent to driver
19/03/01 00:53:06 INFO storage.MemoryStore: Block rdd_14_1 stored as values in memory (estimated size 6.0 KB, free 51.5 KB)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 23) in 18 ms on localhost (1/4)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added rdd_14_1 in memory on localhost:41348 (size: 6.0 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 20) in 20 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 22) in 20 ms on localhost (3/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 21). 1767 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 21) in 24 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.027 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 2 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.108814 s
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:43
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 3 (count at TranscriptCounts.scala:43) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at TranscriptCounts.scala:43)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 1808.0 B, free 53.3 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1186.0 B, free 54.5 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:41348 (size: 1186.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 24)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 26)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 27)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 25)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 26). 2057 bytes result sent to driver
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 27). 2057 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 26) in 16 ms on localhost (1/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 24). 2057 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 25). 2057 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 27) in 14 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 24) in 25 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 25) in 23 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 6 (count at TranscriptCounts.scala:43) finished in 0.027 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 3 finished: count at TranscriptCounts.scala:43, took 0.037033 s
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:51
19/03/01 00:53:06 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/03/01 00:53:06 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 165 bytes
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 19 (distinct at TranscriptCounts.scala:50)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 4 (count at TranscriptCounts.scala:51) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (count at TranscriptCounts.scala:51)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 9)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.0 KB, free 58.4 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.1 KB, free 60.5 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:41348 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 30)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 29)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 28)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 31)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_14_2 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_14_1 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_14_0 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_14_3 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 29). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 28). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 30). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 31). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 30) in 13 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 28) in 17 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 31) in 16 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 29) in 17 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 9 (distinct at TranscriptCounts.scala:50) finished in 0.019 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 10)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.1 KB, free 63.6 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1856.0 B, free 65.5 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:41348 (size: 1856.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 32, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 33, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 32)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 35)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 33)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 34)
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 32). 1123 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 35). 1123 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 33). 1123 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 32) in 14 ms on localhost (1/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 34). 1123 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 35) in 14 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 33) in 15 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 34) in 15 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 10 (count at TranscriptCounts.scala:51) finished in 0.017 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 4 finished: count at TranscriptCounts.scala:51, took 0.062381 s
19/03/01 00:53:06 INFO rdd.ParallelCollectionRDD: Removing RDD 0 from persistence list
19/03/01 00:53:06 INFO storage.BlockManager: Removing RDD 0
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 28 (keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 5 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 12 (collect at BroadcastRegionJoin.scala:100)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 11)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 11)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.2 KB, free 68.0 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.2 KB, free 70.2 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:41348 (size: 2.2 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 11.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 37)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 38)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 11.0 (TID 39)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 36)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 38). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 36). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 36) in 24 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 38) in 16 ms on localhost (2/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 37). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 11.0 (TID 39). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 37) in 27 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 11.0 (TID 39) in 21 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 11 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.033 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 12)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 5.0 KB, free 75.2 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.5 KB, free 77.7 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:41348 (size: 2.5 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 40, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 41, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 42, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 43, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 41)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 42)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 40)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 43)
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:06 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 41). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 43). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 40). 1124 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 42). 1239 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 41) in 10 ms on localhost (1/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 40) in 11 ms on localhost (2/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 43) in 10 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 42) in 12 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ResultStage 12 (collect at BroadcastRegionJoin.scala:100) finished in 0.013 s
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Job 5 finished: collect at BroadcastRegionJoin.scala:100, took 0.062826 s
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 232.0 B, free 77.9 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 128.0 B, free 78.0 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:41348 (size: 128.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 12 from broadcast at BroadcastRegionJoin.scala:109
19/03/01 00:53:06 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 22 (flatMap at ReadCoverage.scala:59)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 32 (flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 30 (map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Registering RDD 39 (map at CoverageStats.scala:172)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Got job 6 (collect at CoverageStats.scala:174) with 4 output partitions
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (collect at CoverageStats.scala:174)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 2.7 KB, free 80.8 KB)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 1677.0 B, free 82.4 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:41348 (size: 1677.0 B, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 3.6 KB, free 86.0 KB)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.1 KB, free 88.1 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:41348 (size: 2.1 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 4 tasks
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 47)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 45)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 44)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 46)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 44). 1090 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 46). 1090 bytes result sent to driver
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 45). 1090 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 48)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 49)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 44) in 32 ms on localhost (1/4)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:06 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 47). 1090 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:06 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 50)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 46) in 31 ms on localhost (2/4)
19/03/01 00:53:06 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 48). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 15.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:06 INFO executor.Executor: Running task 3.0 in stage 15.0 (TID 51)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 45) in 35 ms on localhost (3/4)
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 47) in 34 ms on localhost (4/4)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:06 INFO scheduler.DAGScheduler: ShuffleMapStage 13 (flatMap at ReadCoverage.scala:59) finished in 0.040 s
19/03/01 00:53:06 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:06 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 15)
19/03/01 00:53:06 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 50). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/03/01 00:53:06 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 48) in 13 ms on localhost (1/4)
19/03/01 00:53:06 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/03/01 00:53:06 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 50) in 10 ms on localhost (2/4)
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.3 KB, free 92.4 KB)
19/03/01 00:53:06 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 49). 2240 bytes result sent to driver
19/03/01 00:53:06 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.4 KB, free 94.8 KB)
19/03/01 00:53:06 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:41348 (size: 2.4 KB, free: 511.1 MB)
19/03/01 00:53:06 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:06 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:06 INFO scheduler.TaskSchedulerImpl: Adding task set 14.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 14.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 14.0 (TID 53, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 14.0 (TID 54, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 14.0 (TID 52)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 14.0 (TID 53)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 14.0 (TID 54)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 49) in 19 ms on localhost (3/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 15.0 (TID 51). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_0 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_1 not found, computing it
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 14.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 14.0 (TID 55)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_2 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_3 not found, computing it
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 15.0 (TID 51) in 17 ms on localhost (4/4)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 15 (map at BroadcastRegionJoin.scala:113) finished in 0.044 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 14)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_1 stored as values in memory (estimated size 16.0 B, free 94.8 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_1 in memory on localhost:41348 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_3 stored as values in memory (estimated size 16.0 B, free 94.9 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_3 in memory on localhost:41348 (size: 16.0 B, free: 511.1 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 14.0 (TID 54). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 14.0 (TID 55). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 14.0 (TID 54) in 10 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 14.0 (TID 55) in 10 ms on localhost (2/4)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_0 stored as values in memory (estimated size 22.8 KB, free 117.6 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_0 in memory on localhost:41348 (size: 22.8 KB, free: 511.1 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_2 stored as values in memory (estimated size 22.8 KB, free 140.4 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_2 in memory on localhost:41348 (size: 22.8 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 14.0 (TID 52). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 14.0 (TID 53). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 14.0 (TID 52) in 56 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 14.0 (TID 53) in 59 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 14.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 14 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.060 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.1 KB, free 144.5 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.2 KB, free 146.7 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:41348 (size: 2.2 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 56)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 58)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 57)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 59)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_0 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_1 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_3 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_2 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_3 stored as values in memory (estimated size 16.0 B, free 146.7 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_3 in memory on localhost:41348 (size: 16.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_0 stored as values in memory (estimated size 16.0 B, free 146.7 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_2 stored as values in memory (estimated size 16.0 B, free 146.7 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_0 in memory on localhost:41348 (size: 16.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_2 in memory on localhost:41348 (size: 16.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 59). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 56). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 58). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 59) in 14 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 56) in 15 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 58) in 17 ms on localhost (3/4)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_1 stored as values in memory (estimated size 45.8 KB, free 192.6 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_1 in memory on localhost:41348 (size: 45.8 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 57). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 57) in 61 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (map at CoverageStats.scala:172) finished in 0.062 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 2.5 KB, free 195.1 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 1554.0 B, free 196.6 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:41348 (size: 1554.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 17.0 (TID 60, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 17.0 (TID 61, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 62, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 17.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 17.0 (TID 60)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 17.0 (TID 63)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 62)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 17.0 (TID 61)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 17.0 (TID 61). 1131 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 62). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 17.0 (TID 63). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 17.0 (TID 60). 1131 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 17.0 (TID 63) in 10 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 17.0 (TID 61) in 11 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 17.0 (TID 60) in 12 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 62) in 12 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 17 (collect at CoverageStats.scala:174) finished in 0.013 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 6 finished: collect at CoverageStats.scala:174, took 0.216195 s
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/03/01 00:53:07 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 8 is 159 bytes
19/03/01 00:53:07 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 161 bytes
19/03/01 00:53:07 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 161 bytes
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 42 (map at CoverageStats.scala:172)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 7 (collect at CoverageStats.scala:174) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (collect at CoverageStats.scala:174)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 21)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 21)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.2 KB, free 200.9 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.2 KB, free 203.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:41348 (size: 2.2 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 19
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 4 tasks
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_17_piece0 on localhost:41348 in memory (size: 1554.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 34
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_16_piece0 on localhost:41348 in memory (size: 2.2 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 21.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 33
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 21.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 21.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 21.0 (TID 65)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 21.0 (TID 67)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 21.0 (TID 66)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 64)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_15_piece0 on localhost:41348 in memory (size: 2.4 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 32
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_37_3 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_37_2 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_37_0 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_37_1 locally
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:41348 in memory (size: 2.1 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 31
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:41348 in memory (size: 1677.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 30
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 7
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:41348 in memory (size: 2.5 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 21.0 (TID 67). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 29
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 21.0 (TID 66). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 64). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:41348 in memory (size: 2.2 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 28
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 4
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 21.0 (TID 67) in 9 ms on localhost (1/4)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:41348 in memory (size: 1856.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 21.0 (TID 66) in 10 ms on localhost (2/4)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 27
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 64) in 12 ms on localhost (3/4)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:41348 in memory (size: 2.1 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 26
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:41348 in memory (size: 1186.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 25
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:41348 in memory (size: 2047.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 24
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:41348 in memory (size: 2.1 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 23
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:41348 in memory (size: 2039.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 22
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 21.0 (TID 65). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:41348 in memory (size: 2.5 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 21
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:41348 in memory (size: 2.1 KB, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 20
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 21.0 (TID 65) in 23 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 21 (map at CoverageStats.scala:172) finished in 0.023 s
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:41348 in memory (size: 1324.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 22)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 2.5 KB, free 117.0 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 1554.0 B, free 118.6 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:41348 (size: 1554.0 B, free: 511.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 68, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 69, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 68)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 70)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 69)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 71)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 71). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 71) in 9 ms on localhost (1/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 69). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 70). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 68). 1131 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 69) in 13 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 70) in 14 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 68) in 15 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 22 (collect at CoverageStats.scala:174) finished in 0.015 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 7 finished: collect at CoverageStats.scala:174, took 0.089881 s
19/03/01 00:53:07 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:07 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:07 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:07 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:07 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:07 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:07 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:07 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
- two transcripts, one fully covered, one not covered at all, one random read
19/03/01 00:53:07 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:07 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:07 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:07 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:07 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:07 INFO util.Utils: Successfully started service 'sparkDriver' on port 59380.
19/03/01 00:53:07 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:07 INFO Remoting: Starting remoting
19/03/01 00:53:07 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59381]
19/03/01 00:53:07 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59381.
19/03/01 00:53:07 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:07 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:07 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-9eb05990-53ac-4580-bc71-6e8c3366fb4d
19/03/01 00:53:07 INFO storage.MemoryStore: MemoryStore started with capacity 492.0 MB
19/03/01 00:53:07 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:07 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:07 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40716.
19/03/01 00:53:07 INFO netty.NettyBlockTransferService: Server created on 40716
19/03/01 00:53:07 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:07 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40716 with 492.0 MB RAM, BlockManagerId(driver, localhost, 40716)
19/03/01 00:53:07 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40716 (size: 1324.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at map at RNASeqReadCounts.scala:79)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2157 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_0_0 not found, computing it
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_0_0 stored as values in memory (estimated size 352.0 B, free 3.7 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_0_0 in memory on localhost:40716 (size: 352.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_0_2 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_0_1 not found, computing it
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_0_2 stored as values in memory (estimated size 352.0 B, free 4.0 KB)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_0_3 not found, computing it
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_0_1 stored as values in memory (estimated size 352.0 B, free 4.4 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_0_2 in memory on localhost:40716 (size: 352.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_0_3 stored as values in memory (estimated size 632.0 B, free 5.0 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_0_1 in memory on localhost:40716 (size: 352.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1548 bytes result sent to driver
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_0_3 in memory on localhost:40716 (size: 632.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1548 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1548 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1548 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 20 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 18 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 19 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 16 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.022 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.029618 s
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: collect at RightOuterJoin.scala:77
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at RightOuterJoin.scala:75)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 1 (collect at RightOuterJoin.scala:77) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (collect at RightOuterJoin.scala:77)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.0 KB, free 9.0 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.1 KB, free 11.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40716 (size: 2.1 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at RightOuterJoin.scala:75)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_1_0 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_1_3 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_1_2 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_1_1 not found, computing it
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_1_0 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_1_2 stored as values in memory (estimated size 16.0 B, free 11.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_1_0 in memory on localhost:40716 (size: 16.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_1_3 stored as values in memory (estimated size 4.7 KB, free 15.9 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_1_2 in memory on localhost:40716 (size: 16.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_1_1 stored as values in memory (estimated size 4.7 KB, free 20.6 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_1_3 in memory on localhost:40716 (size: 4.7 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_1_1 in memory on localhost:40716 (size: 4.7 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1670 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1670 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 15 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 13 ms on localhost (2/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1670 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1670 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 19 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 17 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at RightOuterJoin.scala:75) finished in 0.022 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.8 KB, free 25.3 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 27.8 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40716 (size: 2.5 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[8] at groupByKey at RightOuterJoin.scala:76)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1239 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 11 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 12 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 11 ms on localhost (3/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 14 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 2 (collect at RightOuterJoin.scala:77) finished in 0.017 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 1 finished: collect at RightOuterJoin.scala:77, took 0.055166 s
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 232.0 B, free 28.0 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 128.0 B, free 28.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:40716 (size: 128.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 3 from broadcast at RightOuterJoin.scala:86
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 9 (map at RightOuterJoin.scala:90)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at RightOuterJoin.scala:94)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 2 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3, ShuffleMapStage 4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.4 KB, free 31.5 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2039.0 B, free 33.5 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:40716 (size: 2039.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[9] at map at RightOuterJoin.scala:90)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.7 KB, free 37.2 KB)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 39.3 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:40716 (size: 2.1 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[10] at flatMap at RightOuterJoin.scala:94)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 18 ms on localhost (1/4)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_0_0 locally
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 13 ms on localhost (2/4)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_0_1 locally
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 16 ms on localhost (3/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_0_2 locally
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 24 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (map at RightOuterJoin.scala:90) finished in 0.027 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 13 ms on localhost (1/4)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_0_3 locally
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 16 ms on localhost (2/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 14 ms on localhost (3/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 15 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (flatMap at RightOuterJoin.scala:94) finished in 0.029 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.8 KB, free 43.1 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2047.0 B, free 45.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:40716 (size: 2047.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 5 (MapPartitionsRDD[16] at flatMap at RNASeqAlignmentCounts.scala:71)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 23)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 21)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 20)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 22)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_14_2 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_14_3 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_14_0 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_14_1 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_14_2 stored as values in memory (estimated size 16.0 B, free 45.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_14_2 in memory on localhost:40716 (size: 16.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_14_0 stored as values in memory (estimated size 392.0 B, free 45.5 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_14_0 in memory on localhost:40716 (size: 392.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_14_3 stored as values in memory (estimated size 16.0 B, free 45.5 KB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 22). 1704 bytes result sent to driver
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_14_3 in memory on localhost:40716 (size: 16.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 20). 1767 bytes result sent to driver
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_14_1 stored as values in memory (estimated size 6.0 KB, free 51.5 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_14_1 in memory on localhost:40716 (size: 6.0 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 22) in 12 ms on localhost (1/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 23). 1704 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 20) in 13 ms on localhost (2/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 21). 1767 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 23) in 13 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 21) in 16 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 5 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.016 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 2 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.068179 s
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:43
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 3 (count at TranscriptCounts.scala:43) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at TranscriptCounts.scala:43)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 1808.0 B, free 53.3 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1186.0 B, free 54.5 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:40716 (size: 1186.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[17] at filter at TranscriptCounts.scala:42)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 25)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 24)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 26)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 27)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 27). 2057 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 25). 2057 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 24). 2057 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 26). 2057 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 27) in 6 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 24) in 11 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 26) in 8 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 25) in 9 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 6 (count at TranscriptCounts.scala:43) finished in 0.011 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 3 finished: count at TranscriptCounts.scala:43, took 0.016666 s
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: count at TranscriptCounts.scala:51
19/03/01 00:53:07 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/03/01 00:53:07 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 165 bytes
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 19 (distinct at TranscriptCounts.scala:50)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 4 (count at TranscriptCounts.scala:51) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (count at TranscriptCounts.scala:51)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 9)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.0 KB, free 58.4 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.1 KB, free 60.5 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:40716 (size: 2.1 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 9 (MapPartitionsRDD[19] at distinct at TranscriptCounts.scala:50)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 30)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 28)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 29)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 31)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_14_3 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_14_2 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_14_1 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_14_0 locally
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 31). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 30). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 28). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 29). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 31) in 7 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 28) in 9 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 29) in 8 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 30) in 8 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 9 (distinct at TranscriptCounts.scala:50) finished in 0.009 s
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 10)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.1 KB, free 63.6 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1856.0 B, free 65.5 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:40716 (size: 1856.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[21] at distinct at TranscriptCounts.scala:50)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 32, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 33, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 32)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 34)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 33)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 35)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 33). 1123 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 34). 1123 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 35). 1123 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 33) in 8 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 34) in 9 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 35) in 9 ms on localhost (3/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 32). 1123 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 32) in 13 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 10 (count at TranscriptCounts.scala:51) finished in 0.013 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 4 finished: count at TranscriptCounts.scala:51, took 0.036745 s
19/03/01 00:53:07 INFO rdd.ParallelCollectionRDD: Removing RDD 0 from persistence list
19/03/01 00:53:07 INFO storage.BlockManager: Removing RDD 0
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 28 (keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 5 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 12 (collect at BroadcastRegionJoin.scala:100)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 11)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 11)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.2 KB, free 68.0 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.2 KB, free 70.2 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:40716 (size: 2.2 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 11 (MapPartitionsRDD[28] at keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 11.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 38)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 37)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 11.0 (TID 39)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 36)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 36). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 38). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 36) in 11 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 38) in 10 ms on localhost (2/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 11.0 (TID 39). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 37). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 11.0 (TID 39) in 14 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 37) in 18 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 11 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.020 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 12)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 5.0 KB, free 75.2 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.5 KB, free 77.7 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:40716 (size: 2.5 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 12 (ShuffledRDD[29] at groupByKey at BroadcastRegionJoin.scala:99)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 40, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 41, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 42, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 43, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 42)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 41)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 43)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 40)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 41). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 43). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 41) in 9 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 43) in 8 ms on localhost (2/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 40). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 42). 1239 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 40) in 14 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 42) in 17 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 12 (collect at BroadcastRegionJoin.scala:100) finished in 0.018 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 5 finished: collect at BroadcastRegionJoin.scala:100, took 0.056432 s
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 232.0 B, free 77.9 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 128.0 B, free 78.0 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:40716 (size: 128.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 12 from broadcast at BroadcastRegionJoin.scala:109
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 22 (flatMap at ReadCoverage.scala:59)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 32 (flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 30 (map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Registering RDD 39 (map at CoverageStats.scala:172)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Got job 6 (collect at CoverageStats.scala:174) with 4 output partitions
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (collect at CoverageStats.scala:174)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 2.7 KB, free 80.8 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 1677.0 B, free 82.4 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:40716 (size: 1677.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 13 (MapPartitionsRDD[22] at flatMap at ReadCoverage.scala:59)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 3.6 KB, free 86.0 KB)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.1 KB, free 88.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:40716 (size: 2.1 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 15 (MapPartitionsRDD[30] at map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 2079 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 2146 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 44)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 45)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 46)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 47)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 45). 1090 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 44). 1090 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 46). 1090 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 47). 1090 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 48)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_0 locally
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 49)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 45) in 30 ms on localhost (1/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 48). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_1 locally
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 50)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 46) in 33 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 44) in 36 ms on localhost (3/4)
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_2 locally
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 15.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2071 bytes)
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 50). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 15.0 (TID 51)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 49). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 47) in 36 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 13 (flatMap at ReadCoverage.scala:59) finished in 0.042 s
19/03/01 00:53:07 INFO storage.BlockManager: Found block rdd_1_3 locally
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 50) in 10 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 15)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17, ShuffleMapStage 14)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 48) in 17 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 49) in 16 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.3 KB, free 92.4 KB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 15.0 (TID 51). 2240 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 15.0 (TID 51) in 16 ms on localhost (4/4)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.4 KB, free 94.8 KB)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:40716 (size: 2.4 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 14 (MapPartitionsRDD[32] at flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 14.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 14.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 14.0 (TID 53, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 14.0 (TID 54, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 14.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 14.0 (TID 52)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 15 (map at BroadcastRegionJoin.scala:113) finished in 0.049 s
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 14.0 (TID 53)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 14.0 (TID 54)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 14.0 (TID 55)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 14)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_0 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_2 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_3 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_23_1 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_3 stored as values in memory (estimated size 16.0 B, free 94.8 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_3 in memory on localhost:40716 (size: 16.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_1 stored as values in memory (estimated size 16.0 B, free 94.9 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_1 in memory on localhost:40716 (size: 16.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 14.0 (TID 55). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 14.0 (TID 54). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 14.0 (TID 55) in 11 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 14.0 (TID 54) in 12 ms on localhost (2/4)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:40716 in memory (size: 2.1 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:40716 in memory (size: 1677.0 B, free: 492.0 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:40716 in memory (size: 2.5 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 47
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:40716 in memory (size: 2.2 KB, free: 492.0 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 46
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_0 stored as values in memory (estimated size 22.8 KB, free 93.7 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_23_2 stored as values in memory (estimated size 22.8 KB, free 116.5 KB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 4
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_0 in memory on localhost:40716 (size: 22.8 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_23_2 in memory on localhost:40716 (size: 22.8 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:40716 in memory (size: 1856.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 45
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:40716 in memory (size: 2.1 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 44
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:40716 in memory (size: 1186.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 43
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:40716 in memory (size: 2047.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 42
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:40716 in memory (size: 2.1 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 41
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:40716 in memory (size: 2039.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 40
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:40716 in memory (size: 2.5 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 39
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:40716 in memory (size: 2.1 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 38
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:40716 in memory (size: 1324.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.ContextCleaner: Cleaned accumulator 37
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 14.0 (TID 53). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 14.0 (TID 52). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 14.0 (TID 53) in 84 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 14.0 (TID 52) in 85 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 14 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.086 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 14.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 16, ResultStage 17)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.1 KB, free 73.0 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.2 KB, free 75.2 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:40716 (size: 2.2 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[39] at map at CoverageStats.scala:172)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 59)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 58)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 57)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 56)
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_3 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_2 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_0 not found, computing it
19/03/01 00:53:07 INFO spark.CacheManager: Partition rdd_37_1 not found, computing it
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_2 stored as values in memory (estimated size 16.0 B, free 75.2 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_3 stored as values in memory (estimated size 16.0 B, free 75.2 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_2 in memory on localhost:40716 (size: 16.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_3 in memory on localhost:40716 (size: 16.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 58). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 59). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_0 stored as values in memory (estimated size 16.0 B, free 75.2 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_0 in memory on localhost:40716 (size: 16.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 58) in 12 ms on localhost (1/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 59) in 12 ms on localhost (2/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 56). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 56) in 16 ms on localhost (3/4)
19/03/01 00:53:07 INFO storage.MemoryStore: Block rdd_37_1 stored as values in memory (estimated size 45.8 KB, free 121.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added rdd_37_1 in memory on localhost:40716 (size: 45.8 KB, free: 491.9 MB)
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 57). 1886 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 57) in 60 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (map at CoverageStats.scala:172) finished in 0.061 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:07 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 2.5 KB, free 123.6 KB)
19/03/01 00:53:07 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 1554.0 B, free 125.1 KB)
19/03/01 00:53:07 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:40716 (size: 1554.0 B, free: 491.9 MB)
19/03/01 00:53:07 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 17 (ShuffledRDD[40] at reduceByKey at CoverageStats.scala:173)
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 4 tasks
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 17.0 (TID 60, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 17.0 (TID 61, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 62, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 17.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:07 INFO executor.Executor: Running task 3.0 in stage 17.0 (TID 63)
19/03/01 00:53:07 INFO executor.Executor: Running task 2.0 in stage 17.0 (TID 61)
19/03/01 00:53:07 INFO executor.Executor: Running task 1.0 in stage 17.0 (TID 60)
19/03/01 00:53:07 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 62)
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:07 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:07 INFO executor.Executor: Finished task 1.0 in stage 17.0 (TID 60). 1131 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 3.0 in stage 17.0 (TID 63). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO executor.Executor: Finished task 2.0 in stage 17.0 (TID 61). 1131 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 17.0 (TID 63) in 7 ms on localhost (1/4)
19/03/01 00:53:07 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 62). 1124 bytes result sent to driver
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 17.0 (TID 60) in 9 ms on localhost (2/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 17.0 (TID 61) in 8 ms on localhost (3/4)
19/03/01 00:53:07 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 62) in 9 ms on localhost (4/4)
19/03/01 00:53:07 INFO scheduler.DAGScheduler: ResultStage 17 (collect at CoverageStats.scala:174) finished in 0.010 s
19/03/01 00:53:07 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:07 INFO scheduler.DAGScheduler: Job 6 finished: collect at CoverageStats.scala:174, took 0.240451 s
19/03/01 00:53:07 INFO spark.SparkContext: Starting job: collect at CoverageStats.scala:174
19/03/01 00:53:08 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 8 is 159 bytes
19/03/01 00:53:08 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 161 bytes
19/03/01 00:53:08 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 161 bytes
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 42 (map at CoverageStats.scala:172)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 7 (collect at CoverageStats.scala:174) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (collect at CoverageStats.scala:174)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 21)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 21)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.2 KB, free 129.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.2 KB, free 131.6 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:40716 (size: 2.2 KB, free: 491.9 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 21 (MapPartitionsRDD[42] at map at CoverageStats.scala:172)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 21.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 21.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 21.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1956 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 64)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 21.0 (TID 66)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 21.0 (TID 67)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 21.0 (TID 65)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_37_2 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_37_1 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_37_3 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_37_0 locally
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 21.0 (TID 66). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 21.0 (TID 67). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 21.0 (TID 66) in 6 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 64). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 64) in 10 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 21.0 (TID 67) in 9 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 21.0 (TID 65). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 21.0 (TID 65) in 15 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 21 (map at CoverageStats.scala:172) finished in 0.016 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 22)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 2.5 KB, free 134.1 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 1554.0 B, free 135.6 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:40716 (size: 1554.0 B, free: 491.9 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (ShuffledRDD[43] at reduceByKey at CoverageStats.scala:173)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 68, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 69, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 69)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 68)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 71)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 70)
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 71). 1124 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 69). 1124 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 71) in 6 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 69) in 10 ms on localhost (2/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 70). 1124 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 68). 1131 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 68) in 13 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 70) in 12 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 22 (collect at CoverageStats.scala:174) finished in 0.014 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 7 finished: collect at CoverageStats.scala:174, took 0.047844 s
19/03/01 00:53:08 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:08 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:08 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:08 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:08 INFO spark.SparkContext: Successfully stopped SparkContext
- two SO transcripts, one fully covered, one not covered at all, one random read
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:08 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:08 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriver' on port 59019.
19/03/01 00:53:08 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:08 INFO Remoting: Starting remoting
19/03/01 00:53:08 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59020]
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59020.
19/03/01 00:53:08 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:08 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:08 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-366153d0-59dc-4545-8c94-24d6626c77ba
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore started with capacity 501.0 MB
19/03/01 00:53:08 INFO spark.SparkEnv: Registering OutputCommitCoordinator
PanelBasesSuite:
19/03/01 00:53:08 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40075.
19/03/01 00:53:08 INFO netty.NettyBlockTransferService: Server created on 40075
19/03/01 00:53:08 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:08 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40075 with 501.0 MB RAM, BlockManagerId(driver, localhost, 40075)
19/03/01 00:53:08 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:67
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 0 (count at PanelBases.scala:67) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at PanelBases.scala:67)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 1840.0 B, free 1840.0 B)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1207.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40075 (size: 1207.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2050 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_2 not found, computing it
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_2 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_0 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_1 not found, computing it
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_2 in memory on localhost:40075 (size: 16.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_1 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_0 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_1 in memory on localhost:40075 (size: 16.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_3 not found, computing it
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_0 in memory on localhost:40075 (size: 16.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 17 ms on localhost (1/4)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_3 stored as values in memory (estimated size 5.5 KB, free 8.5 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_3 in memory on localhost:40075 (size: 5.5 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 20 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 25 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1488 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 16 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 0 (count at PanelBases.scala:67) finished in 0.028 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 0 finished: count at PanelBases.scala:67, took 0.040168 s
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:68
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 4 (distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 1 (count at PanelBases.scala:68) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (count at PanelBases.scala:68)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.9 KB, free 11.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1761.0 B, free 13.1 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40075 (size: 1761.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 11 ms on localhost (2/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 11 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 15 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (distinct at PanelBases.scala:59) finished in 0.018 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 3.1 KB, free 16.2 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1840.0 B, free 18.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40075 (size: 1840.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_1 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_2 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_0 not found, computing it
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_3 not found, computing it
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_1 stored as values in memory (estimated size 2.5 KB, free 20.5 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_2 stored as values in memory (estimated size 3.2 KB, free 23.7 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_1 in memory on localhost:40075 (size: 2.5 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_3 stored as values in memory (estimated size 2.7 KB, free 26.4 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_2 in memory on localhost:40075 (size: 3.2 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_3 in memory on localhost:40075 (size: 2.7 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_0 stored as values in memory (estimated size 3.4 KB, free 29.8 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_0 in memory on localhost:40075 (size: 3.4 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 9 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 10 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 11 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 2 (count at PanelBases.scala:68) finished in 0.011 s
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 1 finished: count at PanelBases.scala:68, took 0.041507 s
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:69
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 2 (flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 6 (distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 2 (count at PanelBases.scala:69) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at PanelBases.scala:69)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 2.6 KB, free 32.3 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1633.0 B, free 33.9 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:40075 (size: 1633.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.2 KB, free 37.1 KB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1931.0 B, free 39.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:40075 (size: 1931.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_0 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_1 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_2 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_3 locally
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 16)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 17)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_0 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 8 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 18)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_1 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 11 ms on localhost (2/4)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_2 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 11 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 19)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_3 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 12 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at PanelBases.scala:46) finished in 0.016 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 5)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 16). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 18). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 17). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 16) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 18) in 10 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 17) in 10 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 19). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 19) in 9 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (distinct at PanelBases.scala:59) finished in 0.019 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.4 KB, free 42.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1980.0 B, free 44.4 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:40075 (size: 1980.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 20)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 23)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 21)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 22)
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 23). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 21). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 23) in 9 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 21) in 9 ms on localhost (2/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 22). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 20). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 20) in 15 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 22) in 14 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 6 (count at PanelBases.scala:69) finished in 0.015 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 2 finished: count at PanelBases.scala:69, took 0.049540 s
19/03/01 00:53:08 INFO rdd.MapPartitionsRDD: Removing RDD 2 from persistence list
19/03/01 00:53:08 INFO storage.BlockManager: Removing RDD 2
19/03/01 00:53:08 INFO rdd.MapPartitionsRDD: Removing RDD 6 from persistence list
19/03/01 00:53:08 INFO storage.BlockManager: Removing RDD 6
19/03/01 00:53:08 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:08 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:08 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:08 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:08 INFO spark.SparkContext: Successfully stopped SparkContext
- compute coverage for a panel with one bait and one target
19/03/01 00:53:08 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:08 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:08 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriver' on port 50083.
19/03/01 00:53:08 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:08 INFO Remoting: Starting remoting
19/03/01 00:53:08 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:50084]
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 50084.
19/03/01 00:53:08 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:08 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:08 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-503099c5-a559-4cba-ae88-bfd743d8e212
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore started with capacity 501.0 MB
19/03/01 00:53:08 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:08 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 44917.
19/03/01 00:53:08 INFO netty.NettyBlockTransferService: Server created on 44917
19/03/01 00:53:08 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:08 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:44917 with 501.0 MB RAM, BlockManagerId(driver, localhost, 44917)
19/03/01 00:53:08 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:67
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 0 (count at PanelBases.scala:67) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at PanelBases.scala:67)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 1840.0 B, free 1840.0 B)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1207.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:44917 (size: 1207.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2050 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_2 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_0 not found, computing it
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_0 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_3 not found, computing it
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_2 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_0 in memory on localhost:44917 (size: 16.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_1 not found, computing it
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_2 in memory on localhost:44917 (size: 16.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_1 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_1 in memory on localhost:44917 (size: 16.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_3 stored as values in memory (estimated size 5.5 KB, free 8.5 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_3 in memory on localhost:44917 (size: 5.5 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1488 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 15 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 22 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 15 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 23 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 0 (count at PanelBases.scala:67) finished in 0.026 s
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 0 finished: count at PanelBases.scala:67, took 0.037876 s
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:68
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 4 (distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 1 (count at PanelBases.scala:68) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (count at PanelBases.scala:68)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.9 KB, free 11.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1761.0 B, free 13.1 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:44917 (size: 1761.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 15 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 13 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 19 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (distinct at PanelBases.scala:59) finished in 0.019 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 3.1 KB, free 16.2 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1840.0 B, free 18.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:44917 (size: 1840.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_1 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_3 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_2 not found, computing it
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_0 not found, computing it
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_1 stored as values in memory (estimated size 2.5 KB, free 20.5 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_1 in memory on localhost:44917 (size: 2.5 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_3 stored as values in memory (estimated size 2.7 KB, free 23.2 KB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_3 in memory on localhost:44917 (size: 2.7 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_2 stored as values in memory (estimated size 3.2 KB, free 26.4 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_2 in memory on localhost:44917 (size: 3.2 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_0 stored as values in memory (estimated size 3.4 KB, free 29.8 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_0 in memory on localhost:44917 (size: 3.4 KB, free: 501.0 MB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 11 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 12 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 13 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 2 (count at PanelBases.scala:68) finished in 0.014 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 1 finished: count at PanelBases.scala:68, took 0.054033 s
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:69
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 2 (flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 165 bytes
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 6 (distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 2 (count at PanelBases.scala:69) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at PanelBases.scala:69)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 2.6 KB, free 32.3 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1633.0 B, free 33.9 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:44917 (size: 1633.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.2 KB, free 37.1 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1931.0 B, free 39.0 KB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:44917 (size: 1931.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_0 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_3 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_1 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_2 locally
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 16)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 17)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 21 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_0 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_1 locally
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 18)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_2 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 17 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 21 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 19)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_3 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 20 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at PanelBases.scala:46) finished in 0.029 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 5)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 17). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 18). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 19). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 16). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 18) in 13 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 17) in 15 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 19) in 10 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 16) in 17 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (distinct at PanelBases.scala:59) finished in 0.025 s
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.4 KB, free 42.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1980.0 B, free 44.4 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:44917 (size: 1980.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 20)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 21)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 22)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 23)
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 20). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 21). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 20) in 15 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 21) in 15 ms on localhost (2/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 23). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:44917 in memory (size: 1931.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 23) in 47 ms on localhost (3/4)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:44917 in memory (size: 1633.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:44917 in memory (size: 1840.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.ContextCleaner: Cleaned accumulator 63
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:44917 in memory (size: 1761.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO spark.ContextCleaner: Cleaned accumulator 62
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:44917 in memory (size: 1207.0 B, free: 501.0 MB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 22). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO spark.ContextCleaner: Cleaned accumulator 61
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 22) in 57 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 6 (count at PanelBases.scala:69) finished in 0.058 s
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 2 finished: count at PanelBases.scala:69, took 0.113944 s
19/03/01 00:53:08 INFO rdd.MapPartitionsRDD: Removing RDD 2 from persistence list
19/03/01 00:53:08 INFO storage.BlockManager: Removing RDD 2
19/03/01 00:53:08 INFO rdd.MapPartitionsRDD: Removing RDD 6 from persistence list
19/03/01 00:53:08 INFO storage.BlockManager: Removing RDD 6
19/03/01 00:53:08 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:08 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:08 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:08 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:08 INFO spark.SparkContext: Successfully stopped SparkContext
- compute coverage for a panel with two baits and one target
19/03/01 00:53:08 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:08 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriver' on port 55914.
19/03/01 00:53:08 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:08 INFO Remoting: Starting remoting
19/03/01 00:53:08 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:55915]
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 55915.
19/03/01 00:53:08 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:08 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:08 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-8d647f73-2af5-4325-9021-679f4b4dbe00
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/03/01 00:53:08 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:08 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 36846.
19/03/01 00:53:08 INFO netty.NettyBlockTransferService: Server created on 36846
19/03/01 00:53:08 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:08 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:36846 with 500.3 MB RAM, BlockManagerId(driver, localhost, 36846)
19/03/01 00:53:08 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:67
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 0 (count at PanelBases.scala:67) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at PanelBases.scala:67)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 1840.0 B, free 1840.0 B)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1207.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:36846 (size: 1207.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2015 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2050 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_2 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_1 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_0 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_2_3 not found, computing it
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_1 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_2 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_1 in memory on localhost:36846 (size: 16.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_0 stored as values in memory (estimated size 16.0 B, free 3.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_2 in memory on localhost:36846 (size: 16.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_0 in memory on localhost:36846 (size: 16.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_2_3 stored as values in memory (estimated size 5.5 KB, free 8.5 KB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_2_3 in memory on localhost:36846 (size: 5.5 KB, free: 500.2 MB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1487 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1488 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 20 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 19 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 25 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 17 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 0 (count at PanelBases.scala:67) finished in 0.027 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 0 finished: count at PanelBases.scala:67, took 0.039280 s
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:68
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 4 (distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 1 (count at PanelBases.scala:68) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (count at PanelBases.scala:68)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.9 KB, free 11.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1761.0 B, free 13.1 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:36846 (size: 1761.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[4] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 18 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 22 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 25 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 19 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (distinct at PanelBases.scala:59) finished in 0.028 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 3.1 KB, free 16.2 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1840.0 B, free 18.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:36846 (size: 1840.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_2 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_0 not found, computing it
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_1 not found, computing it
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO spark.CacheManager: Partition rdd_6_3 not found, computing it
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_2 stored as values in memory (estimated size 3.2 KB, free 21.2 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_2 in memory on localhost:36846 (size: 3.2 KB, free: 500.2 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_1 stored as values in memory (estimated size 2.5 KB, free 23.7 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_1 in memory on localhost:36846 (size: 2.5 KB, free: 500.2 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_0 stored as values in memory (estimated size 3.4 KB, free 27.1 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_0 in memory on localhost:36846 (size: 3.4 KB, free: 500.2 MB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block rdd_6_3 stored as values in memory (estimated size 2.7 KB, free 29.8 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added rdd_6_3 in memory on localhost:36846 (size: 2.7 KB, free: 500.2 MB)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 11 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1703 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 11 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 11 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 13 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 2 (count at PanelBases.scala:68) finished in 0.014 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 1 finished: count at PanelBases.scala:68, took 0.058627 s
19/03/01 00:53:08 INFO spark.SparkContext: Starting job: count at PanelBases.scala:69
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 2 (flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 165 bytes
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Registering RDD 6 (distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Got job 2 (count at PanelBases.scala:69) with 4 output partitions
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Final stage: ResultStage 6 (count at PanelBases.scala:69)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 5, ShuffleMapStage 3)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 2.6 KB, free 32.3 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1633.0 B, free 33.9 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:36846 (size: 1633.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[2] at flatMap at PanelBases.scala:46)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.2 KB, free 37.1 KB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1931.0 B, free 39.0 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:36846 (size: 1931.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[6] at distinct at PanelBases.scala:59)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2004 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2039 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_2 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_0 locally
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_3 locally
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_2_1 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 16)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_0 locally
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 17)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_1 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 18)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 14 ms on localhost (2/4)
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_2 locally
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 13 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1883 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 19)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 16). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO storage.BlockManager: Found block rdd_6_3 locally
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 17). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 15 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at PanelBases.scala:46) finished in 0.020 s
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 5)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 16) in 10 ms on localhost (1/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 18). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 17) in 10 ms on localhost (2/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 18) in 10 ms on localhost (3/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 19). 2240 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 19) in 9 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (distinct at PanelBases.scala:59) finished in 0.020 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:08 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 6)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64), which has no missing parents
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.4 KB, free 42.4 KB)
19/03/01 00:53:08 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1980.0 B, free 44.4 KB)
19/03/01 00:53:08 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:36846 (size: 1980.0 B, free: 500.2 MB)
19/03/01 00:53:08 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 6 (MapPartitionsRDD[10] at filter at PanelBases.scala:64)
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:08 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 22)
19/03/01 00:53:08 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 23)
19/03/01 00:53:08 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 21)
19/03/01 00:53:08 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 20)
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:08 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:08 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 23). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 21). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 23) in 7 ms on localhost (1/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 21) in 8 ms on localhost (2/4)
19/03/01 00:53:08 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 20). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 22). 1123 bytes result sent to driver
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 20) in 14 ms on localhost (3/4)
19/03/01 00:53:08 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 22) in 13 ms on localhost (4/4)
19/03/01 00:53:08 INFO scheduler.DAGScheduler: ResultStage 6 (count at PanelBases.scala:69) finished in 0.014 s
19/03/01 00:53:08 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:08 INFO scheduler.DAGScheduler: Job 2 finished: count at PanelBases.scala:69, took 0.053524 s
19/03/01 00:53:08 INFO rdd.MapPartitionsRDD: Removing RDD 2 from persistence list
19/03/01 00:53:08 INFO storage.BlockManager: Removing RDD 2
19/03/01 00:53:08 INFO rdd.MapPartitionsRDD: Removing RDD 6 from persistence list
19/03/01 00:53:08 INFO storage.BlockManager: Removing RDD 6
19/03/01 00:53:08 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:08 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:08 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:08 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:08 INFO spark.SparkContext: Successfully stopped SparkContext
- compute coverage for a panel with two overlapping baits and one target
19/03/01 00:53:08 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:08 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:08 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:08 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriver' on port 52441.
RNASeqReadCountsSuite:
- check stats for an unaligned read
- check stats for an unique read, mapped on the forward strand
- check stats for an unique read, mapped on the reverse strand
- check stats for a duplicated read, mapped on the forward strand
- check stats for a duplicated read, mapped on the reverse strand
19/03/01 00:53:08 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:08 INFO Remoting: Starting remoting
19/03/01 00:53:08 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52442]
19/03/01 00:53:08 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52442.
19/03/01 00:53:08 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:08 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:08 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-10f80005-30e9-4e2a-ba6d-f84f32586a5d
19/03/01 00:53:08 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/03/01 00:53:08 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:08 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 45402.
19/03/01 00:53:09 INFO netty.NettyBlockTransferService: Server created on 45402
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:09 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:45402 with 500.3 MB RAM, BlockManagerId(driver, localhost, 45402)
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:09 INFO spark.SparkContext: Starting job: reduce at RNASeqReadCounts.scala:80
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqReadCounts.scala:80) with 4 output partitions
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqReadCounts.scala:80)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at RNASeqReadCounts.scala:79), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.0 KB, free 2.0 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1324.0 B, free 3.3 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:45402 (size: 1324.0 B, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at RNASeqReadCounts.scala:79)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2090 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2157 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 934 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 934 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 934 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 934 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 13 ms on localhost (1/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 11 ms on localhost (2/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (3/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 14 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqReadCounts.scala:80) finished in 0.017 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqReadCounts.scala:80, took 0.022039 s
19/03/01 00:53:09 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:09 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:09 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:09 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:09 INFO spark.SparkContext: Successfully stopped SparkContext
- run simple roll up
19/03/01 00:53:09 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:09 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
ComparisonTraversalEngineSuite:
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriver' on port 57056.
19/03/01 00:53:09 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:09 INFO Remoting: Starting remoting
19/03/01 00:53:09 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:57057]
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 57057.
19/03/01 00:53:09 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:09 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:09 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-4a539e74-04e3-4b79-8a1b-0d9a58599115
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/03/01 00:53:09 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:09 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 35284.
19/03/01 00:53:09 INFO netty.NettyBlockTransferService: Server created on 35284
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:09 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:35284 with 500.3 MB RAM, BlockManagerId(driver, localhost, 35284)
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:09 INFO spark.SparkContext: Starting job: collect at ComparisonTraversalEngineSuite.scala:66
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 2 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at ComparisonTraversalEngine.scala:43)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 7 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 11 (keyBy at ComparisonTraversalEngine.scala:45)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Got job 0 (collect at ComparisonTraversalEngineSuite.scala:66) with 4 output partitions
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (collect at ComparisonTraversalEngineSuite.scala:66)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1913.0 B, free 5.4 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:35284 (size: 1913.0 B, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.5 KB, free 8.9 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1915.0 B, free 10.7 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:35284 (size: 1915.0 B, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 5)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 15 ms on localhost (1/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 6)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 26 ms on localhost (2/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 23 ms on localhost (3/4)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 7)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 20 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.030 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 4) in 10 ms on localhost (1/4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 1, ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43), which has no missing parents
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 6) in 8 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 5) in 13 ms on localhost (3/4)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 5.1 KB, free 15.8 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 18.4 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:35284 (size: 2.5 KB, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 9)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 8)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 10)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 11)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 7) in 14 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (groupBy at SingleReadBucket.scala:34) finished in 0.030 s
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 5.1 KB, free 23.5 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.5 KB, free 26.0 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:35284 (size: 2.5 KB, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 10). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 11). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 10) in 10 ms on localhost (1/4)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 11) in 10 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 9). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 8). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 8) in 25 ms on localhost (3/4)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 9) in 24 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at ComparisonTraversalEngine.scala:43) finished in 0.026 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 17 ms on localhost (1/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 17 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 6 ms on localhost (3/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 9 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (keyBy at ComparisonTraversalEngine.scala:45) finished in 0.024 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.6 KB, free 29.6 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.0 KB, free 31.6 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:35284 (size: 2.0 KB, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 1124 bytes result sent to driver
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 9 ms on localhost (1/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 1139 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 1124 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 14 ms on localhost (2/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 13 ms on localhost (3/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 1139 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 17 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ResultStage 4 (collect at ComparisonTraversalEngineSuite.scala:66) finished in 0.019 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Job 0 finished: collect at ComparisonTraversalEngineSuite.scala:66, took 0.111390 s
19/03/01 00:53:09 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:09 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:09 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:09 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:09 INFO spark.SparkContext: Successfully stopped SparkContext
- generate works on a simple RDD
19/03/01 00:53:09 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:09 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriver' on port 51481.
19/03/01 00:53:09 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:09 INFO Remoting: Starting remoting
19/03/01 00:53:09 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:51482]
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 51482.
19/03/01 00:53:09 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:09 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:09 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-34d74023-9835-4572-a086-c0ab972814d8
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore started with capacity 500.3 MB
19/03/01 00:53:09 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:09 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 46189.
19/03/01 00:53:09 INFO netty.NettyBlockTransferService: Server created on 46189
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:09 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:46189 with 500.3 MB RAM, BlockManagerId(driver, localhost, 46189)
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:09 INFO spark.SparkContext: Starting job: aggregate at ComparisonTraversalEngine.scala:88
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 2 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at ComparisonTraversalEngine.scala:43)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 7 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 11 (keyBy at ComparisonTraversalEngine.scala:45)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Got job 0 (aggregate at ComparisonTraversalEngine.scala:88) with 4 output partitions
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (aggregate at ComparisonTraversalEngine.scala:88)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1, ShuffleMapStage 3)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1913.0 B, free 5.4 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:46189 (size: 1913.0 B, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[2] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.5 KB, free 8.9 KB)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1915.0 B, free 10.7 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:46189 (size: 1915.0 B, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[7] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 47 ms on localhost (1/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 5)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 4) in 11 ms on localhost (1/4)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 6)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 48 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 7)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 55 ms on localhost (3/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 54 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.059 s
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 1, ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 5.1 KB, free 15.8 KB)
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.5 KB, free 18.4 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:46189 (size: 2.5 KB, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[6] at keyBy at ComparisonTraversalEngine.scala:43)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 5) in 15 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 8)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 9)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 10)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 6) in 14 ms on localhost (3/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 11)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 7) in 15 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (groupBy at SingleReadBucket.scala:34) finished in 0.059 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45), which has no missing parents
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 10). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 5.1 KB, free 23.5 KB)
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 11). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.5 KB, free 26.0 KB)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 10) in 9 ms on localhost (1/4)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:46189 (size: 2.5 KB, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[11] at keyBy at ComparisonTraversalEngine.scala:45)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 11) in 7 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 8). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 9). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1883 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 8) in 16 ms on localhost (3/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 9) in 17 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at ComparisonTraversalEngine.scala:43) finished in 0.017 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 8 ms on localhost (1/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 8 ms on localhost (2/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 14 ms on localhost (3/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1306 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 17 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (keyBy at ComparisonTraversalEngine.scala:45) finished in 0.017 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.3 KB, free 30.3 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 32.6 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:46189 (size: 2.3 KB, free: 500.2 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 4 (MapPartitionsRDD[15] at map at ComparisonTraversalEngine.scala:76)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 1206 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 11 ms on localhost (1/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 1171 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 1171 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 1171 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 17 ms on localhost (2/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 16 ms on localhost (3/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 19 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ResultStage 4 (aggregate at ComparisonTraversalEngine.scala:88) finished in 0.021 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Job 0 finished: aggregate at ComparisonTraversalEngine.scala:88, took 0.133400 s
19/03/01 00:53:09 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:09 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:09 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:09 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:09 INFO spark.SparkContext: Successfully stopped SparkContext
- combine works on a simple RDD
19/03/01 00:53:09 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:09 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
AFFromVCFSuite:
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriver' on port 53712.
19/03/01 00:53:09 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:09 INFO Remoting: Starting remoting
19/03/01 00:53:09 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:53713]
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 53713.
19/03/01 00:53:09 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:09 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:09 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-39a06e21-f25a-4f8a-8b0c-a687f3e99d45
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:09 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:09 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 42541.
19/03/01 00:53:09 INFO netty.NettyBlockTransferService: Server created on 42541
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:09 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:42541 with 522.0 MB RAM, BlockManagerId(driver, localhost, 42541)
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 33.1 KB, free 33.1 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 3.7 KB, free 36.8 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:42541 (size: 3.7 KB, free: 522.0 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopFile at AFFromVCF.scala:40
19/03/01 00:53:09 INFO input.FileInputFormat: Total input paths to process : 1
19/03/01 00:53:09 INFO spark.SparkContext: Starting job: count at AFFromVCFSuite.scala:27
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Got job 0 (count at AFFromVCFSuite.scala:27) with 1 output partitions
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at AFFromVCFSuite.scala:27)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at flatMap at AFFromVCF.scala:34), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.7 KB, free 39.5 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1633.0 B, free 41.1 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:42541 (size: 1633.0 B, free: 522.0 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at flatMap at AFFromVCF.scala:34)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 1 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2257 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:09 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/af.vcf:0+365
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 2057 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 55 ms on localhost (1/1)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ResultStage 0 (count at AFFromVCFSuite.scala:27) finished in 0.056 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Job 0 finished: count at AFFromVCFSuite.scala:27, took 0.066660 s
19/03/01 00:53:09 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:09 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:09 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:09 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:09 INFO spark.SparkContext: Successfully stopped SparkContext
- converting variant contexts
19/03/01 00:53:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:09 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:09 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:09 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
ComparisonsSuite:
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriver' on port 52060.
19/03/01 00:53:09 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:09 INFO Remoting: Starting remoting
19/03/01 00:53:09 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52061]
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52061.
19/03/01 00:53:09 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:09 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:09 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-7744ceef-8b83-4608-b3ee-263597b689b8
19/03/01 00:53:09 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:09 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:09 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:09 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 42882.
19/03/01 00:53:09 INFO netty.NettyBlockTransferService: Server created on 42882
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:09 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:42882 with 522.0 MB RAM, BlockManagerId(driver, localhost, 42882)
19/03/01 00:53:09 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:09 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:42882 (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:09 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:09 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 21 ms on localhost (1/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 24 ms on localhost (2/4)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 20 ms on localhost (3/4)
19/03/01 00:53:09 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 22 ms on localhost (4/4)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.031 s
19/03/01 00:53:09 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:09 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:09 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 7 ms on localhost (1/1)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.056747 s
19/03/01 00:53:09 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:09 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:09 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:09 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:09 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:09 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:09 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:09 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:09 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/03/01 00:53:09 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/03/01 00:53:09 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:09 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 6 ms on localhost (1/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 9 ms on localhost (2/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 10 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.021851 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:42882 (size: 1912.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 7 ms on localhost (1/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 10 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 9 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 13 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.017 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 12 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.045100 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 9 ms on localhost (1/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 12 ms on localhost (2/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 12 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.014 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.024751 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:42882 (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 9 ms on localhost (1/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 18 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 17 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 18 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.026 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 9 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.051491 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 12 ms on localhost (1/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 13 ms on localhost (2/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 16 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.016 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.023693 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:42882 (size: 1914.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 7 ms on localhost (1/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 10 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 8 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 12 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.016 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 6 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.032671 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 7 ms on localhost (1/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 7 ms on localhost (2/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 8 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.013492 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:42882 (size: 1913.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 11 ms on localhost (1/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 14 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 18 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 17 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.026 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 12 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.053476 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 7 ms on localhost (1/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 9 ms on localhost (2/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 9 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.018337 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:42882 (size: 1914.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 87
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 86
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:42882 in memory (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 91
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned shuffle 2
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 90
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 89
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:42882 in memory (size: 1912.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 88
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned shuffle 1
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 99
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 98
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:42882 in memory (size: 1913.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 97
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned shuffle 4
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 11 ms on localhost (1/4)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 96
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 10 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 14 ms on localhost (3/4)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 95
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:42882 in memory (size: 1914.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 94
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 93
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:42882 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 92
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:42882 in memory (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.ContextCleaner: Cleaned accumulator 85
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 14 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.020 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 9 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.055776 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 7 ms on localhost (1/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 10 ms on localhost (2/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 10 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.021915 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:42882 (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 12 ms on localhost (1/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 21 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 18 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 16 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.025 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 11 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.052611 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 7 ms on localhost (1/3)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 7 ms on localhost (2/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 13 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.019392 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:42882 (size: 1913.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 12 ms on localhost (1/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 16 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 20 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 20 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.028 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 11 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.050551 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:42882 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 5 ms on localhost (1/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 7 ms on localhost (2/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 9 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.015636 s
19/03/01 00:53:10 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:10 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:10 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:10 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:10 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:10 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:10 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:10 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:10 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:10 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:10 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:10 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:10 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:10 INFO util.Utils: Successfully started service 'sparkDriver' on port 52294.
19/03/01 00:53:10 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:10 INFO Remoting: Starting remoting
19/03/01 00:53:10 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52295]
19/03/01 00:53:10 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52295.
19/03/01 00:53:10 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:10 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:10 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-fd127350-156b-47c9-bdb4-28b8e893ca61
19/03/01 00:53:10 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:10 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:10 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:10 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 42188.
19/03/01 00:53:10 INFO netty.NettyBlockTransferService: Server created on 42188
19/03/01 00:53:10 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:10 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:42188 with 522.0 MB RAM, BlockManagerId(driver, localhost, 42188)
19/03/01 00:53:10 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:10 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:10 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:10 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:10 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:10 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:10 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:10 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:10 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:10 INFO spark.SparkContext: Running Spark version 1.6.1
- Dupe mismatches found
19/03/01 00:53:10 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:10 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:10 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:10 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:10 INFO util.Utils: Successfully started service 'sparkDriver' on port 52924.
19/03/01 00:53:10 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:10 INFO Remoting: Starting remoting
19/03/01 00:53:10 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52925]
19/03/01 00:53:10 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52925.
19/03/01 00:53:10 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:10 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:10 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-93099eec-1e26-42cf-834b-88251770fb04
19/03/01 00:53:10 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:10 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:10 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:10 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 43603.
19/03/01 00:53:10 INFO netty.NettyBlockTransferService: Server created on 43603
19/03/01 00:53:10 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:10 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:43603 with 522.0 MB RAM, BlockManagerId(driver, localhost, 43603)
19/03/01 00:53:10 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:43603 (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 21 ms on localhost (1/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 15 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 19 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 20 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.028 s
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 11 ms on localhost (1/1)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.057884 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 9 ms on localhost (1/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 13 ms on localhost (2/3)
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 20 ms on localhost (3/3)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.020 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.028464 s
19/03/01 00:53:10 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:43603 (size: 1912.0 B, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/03/01 00:53:10 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/03/01 00:53:10 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/03/01 00:53:10 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 14 ms on localhost (1/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 17 ms on localhost (2/4)
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 20 ms on localhost (3/4)
19/03/01 00:53:10 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 18 ms on localhost (4/4)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:10 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.026 s
19/03/01 00:53:10 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:10 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:10 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:10 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:10 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:10 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:10 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:10 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/03/01 00:53:10 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:10 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:10 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:10 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 12 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.057072 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 9 ms on localhost (1/3)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 12 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 13 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.023755 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:43603 (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 11 ms on localhost (1/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 11 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 11 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 18 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.021 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 12 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.047445 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 8 ms on localhost (1/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 10 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 11 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.019305 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:43603 (size: 1914.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 12 ms on localhost (1/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 15 ms on localhost (2/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 15 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 17 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.025 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 12 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.054318 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 11 ms on localhost (1/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 11 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 12 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.022594 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:43603 (size: 1913.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 16 ms on localhost (1/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 15 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 21 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 16 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.024 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 10 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.052409 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 8 ms on localhost (1/3)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 8 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 12 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.021712 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 118
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:43603 (size: 1914.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 117
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 116
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:43603 in memory (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 115
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned shuffle 2
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 114
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 113
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:43603 in memory (size: 1912.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 112
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned shuffle 1
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 111
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 110
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:43603 in memory (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 109
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 123
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 122
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 9 ms on localhost (1/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:43603 in memory (size: 1913.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 11 ms on localhost (2/4)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 121
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned shuffle 4
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 16 ms on localhost (3/4)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 120
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:43603 in memory (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned accumulator 119
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:43603 in memory (size: 1914.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 14 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.021 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 11 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.057950 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 11 ms on localhost (1/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 11 ms on localhost (2/3)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 13 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.023155 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:43603 (size: 1915.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 15 ms on localhost (1/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 10 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 13 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 12 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.019 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 10 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.043697 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 10 ms on localhost (1/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 11 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 10 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.020557 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:43603 (size: 1913.0 B, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 9 ms on localhost (1/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 13 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 16 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 12 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.020 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 12 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.047958 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:43603 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 6 ms on localhost (1/3)
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 12 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 15 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.015 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.020804 s
19/03/01 00:53:11 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:11 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:11 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:11 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:11 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:11 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:11 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:11 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:11 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:11 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:11 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:11 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:11 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:11 INFO util.Utils: Successfully started service 'sparkDriver' on port 59459.
19/03/01 00:53:11 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:11 INFO Remoting: Starting remoting
19/03/01 00:53:11 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59460]
19/03/01 00:53:11 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59460.
19/03/01 00:53:11 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:11 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:11 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-d2b28a86-d96e-4bb2-9fa5-3410c98a0dca
19/03/01 00:53:11 INFO storage.MemoryStore: MemoryStore started with capacity 522.8 MB
19/03/01 00:53:11 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:11 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:11 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 39646.
19/03/01 00:53:11 INFO netty.NettyBlockTransferService: Server created on 39646
19/03/01 00:53:11 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:11 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:39646 with 522.8 MB RAM, BlockManagerId(driver, localhost, 39646)
19/03/01 00:53:11 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:11 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:11 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:11 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:11 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:11 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:11 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:11 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:11 INFO spark.SparkContext: Successfully stopped SparkContext
- Mismatched mapped positions histogram generated
19/03/01 00:53:11 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:11 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:11 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:11 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:11 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:11 INFO util.Utils: Successfully started service 'sparkDriver' on port 54172.
19/03/01 00:53:11 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:11 INFO Remoting: Starting remoting
19/03/01 00:53:11 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54173]
19/03/01 00:53:11 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54173.
19/03/01 00:53:11 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:11 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:11 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-d10a6e37-78f7-4f4a-91b8-66476b8fa38a
19/03/01 00:53:11 INFO storage.MemoryStore: MemoryStore started with capacity 522.8 MB
19/03/01 00:53:11 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:11 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:11 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 35951.
19/03/01 00:53:11 INFO netty.NettyBlockTransferService: Server created on 35951
19/03/01 00:53:11 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:11 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:35951 with 522.8 MB RAM, BlockManagerId(driver, localhost, 35951)
19/03/01 00:53:11 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:35951 (size: 1915.0 B, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 17 ms on localhost (1/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 20 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 21 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 20 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.026 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 6 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.051461 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 157 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 11 ms on localhost (1/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 11 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 15 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.016 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.023504 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:35951 (size: 1912.0 B, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 12 ms on localhost (1/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 8 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 12 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 15 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.021 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 6 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.039774 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 157 bytes
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 9 ms on localhost (1/3)
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 9 ms on localhost (2/3)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 11 ms on localhost (3/3)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.022001 s
19/03/01 00:53:11 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:35951 (size: 1915.0 B, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/03/01 00:53:11 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/03/01 00:53:11 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/03/01 00:53:11 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 9 ms on localhost (1/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 8 ms on localhost (2/4)
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 9 ms on localhost (3/4)
19/03/01 00:53:11 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 13 ms on localhost (4/4)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.016 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:11 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/03/01 00:53:11 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:11 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:11 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:11 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:11 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:11 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:11 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/03/01 00:53:11 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 9 ms on localhost (1/1)
19/03/01 00:53:11 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:11 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:11 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.035213 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 157 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 10 ms on localhost (1/3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 14 ms on localhost (2/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 17 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.017 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.029204 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:35951 (size: 1914.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 9 ms on localhost (1/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 8 ms on localhost (2/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 9 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 11 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.014 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 8 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.034084 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 157 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 8 ms on localhost (1/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 8 ms on localhost (2/3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 12 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.021834 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:35951 (size: 1913.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 8 ms on localhost (1/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 10 ms on localhost (2/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 13 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 15 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.019 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 9 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.042613 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 157 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 7 ms on localhost (1/3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 11 ms on localhost (2/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 11 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.020746 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:35951 (size: 1914.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 147
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 146
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:35951 in memory (size: 1913.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 145
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned shuffle 4
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 144
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 143
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 12 ms on localhost (1/4)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:35951 in memory (size: 1914.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 142
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 141
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 30 ms on localhost (2/4)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 140
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:35951 in memory (size: 1915.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 139
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned shuffle 2
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 14 ms on localhost (3/4)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 138
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 137
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:35951 in memory (size: 1912.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 136
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned shuffle 1
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 135
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:35951 in memory (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 134
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:35951 in memory (size: 1915.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned accumulator 133
19/03/01 00:53:12 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 26 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.046 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 8 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.008 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.071586 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 157 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 10 ms on localhost (1/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 12 ms on localhost (2/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 13 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.021833 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:35951 (size: 1915.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 19 ms on localhost (1/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 16 ms on localhost (2/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 15 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 19 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.027 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 10 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.052242 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 157 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 11 ms on localhost (1/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 13 ms on localhost (2/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 13 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.014 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.022711 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:35951 (size: 1913.0 B, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 12 ms on localhost (1/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 16 ms on localhost (2/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 14 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 17 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.023 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 6 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.006 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.046471 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 157 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:35951 (size: 2.3 KB, free: 522.7 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 7 ms on localhost (1/3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 9 ms on localhost (2/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 11 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.018389 s
19/03/01 00:53:12 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:12 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:12 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:12 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:12 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:12 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:12 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:12 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:12 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:12 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:12 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:12 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:12 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:12 INFO util.Utils: Successfully started service 'sparkDriver' on port 58465.
19/03/01 00:53:12 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:12 INFO Remoting: Starting remoting
19/03/01 00:53:12 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:58466]
19/03/01 00:53:12 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 58466.
19/03/01 00:53:12 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:12 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:12 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-5a945304-ebb8-4b6c-a0b8-4a7f9fbd24db
19/03/01 00:53:12 INFO storage.MemoryStore: MemoryStore started with capacity 509.3 MB
19/03/01 00:53:12 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:12 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:12 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 37688.
19/03/01 00:53:12 INFO netty.NettyBlockTransferService: Server created on 37688
19/03/01 00:53:12 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:12 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:37688 with 509.3 MB RAM, BlockManagerId(driver, localhost, 37688)
19/03/01 00:53:12 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:12 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:12 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:12 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:12 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:12 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:12 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:12 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:12 INFO spark.SparkContext: Successfully stopped SparkContext
- Test map quality scores
19/03/01 00:53:12 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:12 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:12 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:12 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:12 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:12 INFO util.Utils: Successfully started service 'sparkDriver' on port 59849.
19/03/01 00:53:12 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:12 INFO Remoting: Starting remoting
19/03/01 00:53:12 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:59850]
19/03/01 00:53:12 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 59850.
19/03/01 00:53:12 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:12 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:12 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-f46e89d5-ecb8-4b93-9e04-4a9408c102d4
19/03/01 00:53:12 INFO storage.MemoryStore: MemoryStore started with capacity 509.3 MB
19/03/01 00:53:12 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:12 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:12 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 36770.
19/03/01 00:53:12 INFO netty.NettyBlockTransferService: Server created on 36770
19/03/01 00:53:12 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:12 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:36770 with 509.3 MB RAM, BlockManagerId(driver, localhost, 36770)
19/03/01 00:53:12 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 1 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 0 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.5 KB, free 3.5 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1915.0 B, free 5.4 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:36770 (size: 1915.0 B, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 28 ms on localhost (1/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 23 ms on localhost (2/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 27 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 30 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (groupBy at SingleReadBucket.scala:34) finished in 0.039 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.6 KB, free 9.9 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.3 KB, free 12.2 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 1 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 12 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 1 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 0 finished: first at ComparisonsSuite.scala:40, took 0.069274 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 0 is 158 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 1 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 3 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 3 (MapPartitionsRDD[3] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 6)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 5)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 7)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 6). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 5). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 7). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 6) in 7 ms on localhost (1/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 5) in 9 ms on localhost (2/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 7) in 10 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 3 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 1 finished: first at ComparisonsSuite.scala:40, took 0.016207 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 5 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 2 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 1912.0 B, free 24.5 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:36770 (size: 1912.0 B, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 4 (MapPartitionsRDD[5] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 8)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 10)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 9)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 11)
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 9). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 8). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 9) in 13 ms on localhost (1/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 8) in 16 ms on localhost (2/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 10). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 10) in 15 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 11). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 11) in 21 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (groupBy at SingleReadBucket.scala:34) finished in 0.029 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 5 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 12, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 12)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 12). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 12) in 11 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 5 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 2 finished: first at ComparisonsSuite.scala:40, took 0.053962 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 3 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 6)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 7 (MapPartitionsRDD[7] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 13, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 14, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 15, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 13)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 14)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 15)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 13). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 15). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 15) in 10 ms on localhost (1/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 13) in 11 ms on localhost (2/3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 14). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 14) in 15 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 7 (first at ComparisonsSuite.scala:40) finished in 0.015 s
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 3 finished: first at ComparisonsSuite.scala:40, took 0.025176 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 9 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 4 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1915.0 B, free 43.6 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:36770 (size: 1915.0 B, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 8 (MapPartitionsRDD[9] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 17)
19/03/01 00:53:12 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 19)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 18)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 16)
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 16). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 18). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 17). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 18) in 7 ms on localhost (1/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 16) in 9 ms on localhost (2/4)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 17) in 9 ms on localhost (3/4)
19/03/01 00:53:12 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 19). 1090 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 19) in 12 ms on localhost (4/4)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (groupBy at SingleReadBucket.scala:34) finished in 0.015 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:12 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 9 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 1 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 20, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 20)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 20). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 20) in 10 ms on localhost (1/1)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 9 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 4 finished: first at ComparisonsSuite.scala:40, took 0.037650 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 158 bytes
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 5 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 11 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 10)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 11 (MapPartitionsRDD[11] at map at SingleReadBucket.scala:35)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 11.0 with 3 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 11.0 (TID 21, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 11.0 (TID 22, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 11.0 (TID 23, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:12 INFO executor.Executor: Running task 2.0 in stage 11.0 (TID 23)
19/03/01 00:53:12 INFO executor.Executor: Running task 0.0 in stage 11.0 (TID 21)
19/03/01 00:53:12 INFO executor.Executor: Running task 1.0 in stage 11.0 (TID 22)
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:12 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:12 INFO executor.Executor: Finished task 2.0 in stage 11.0 (TID 23). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO executor.Executor: Finished task 0.0 in stage 11.0 (TID 21). 1171 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 11.0 (TID 23) in 11 ms on localhost (1/3)
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 11.0 (TID 21) in 13 ms on localhost (2/3)
19/03/01 00:53:12 INFO executor.Executor: Finished task 1.0 in stage 11.0 (TID 22). 1306 bytes result sent to driver
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 11.0 (TID 22) in 18 ms on localhost (3/3)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 11.0, whose tasks have all completed, from pool 
19/03/01 00:53:12 INFO scheduler.DAGScheduler: ResultStage 11 (first at ComparisonsSuite.scala:40) finished in 0.019 s
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Job 5 finished: first at ComparisonsSuite.scala:40, took 0.029038 s
19/03/01 00:53:12 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Registering RDD 13 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Got job 6 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 12)
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 3.5 KB, free 60.9 KB)
19/03/01 00:53:12 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1914.0 B, free 62.7 KB)
19/03/01 00:53:12 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:36770 (size: 1914.0 B, free: 509.2 MB)
19/03/01 00:53:12 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:12 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 12 (MapPartitionsRDD[13] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:12 INFO scheduler.TaskSchedulerImpl: Adding task set 12.0 with 4 tasks
19/03/01 00:53:12 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 12.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 12.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 12.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 12.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 12.0 (TID 27)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 12.0 (TID 26)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 12.0 (TID 24)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 12.0 (TID 25)
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 12.0 (TID 25). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 12.0 (TID 24). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 12.0 (TID 24) in 14 ms on localhost (1/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 12.0 (TID 26). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 12.0 (TID 25) in 12 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 12.0 (TID 26) in 11 ms on localhost (3/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 12.0 (TID 27). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 12.0 (TID 27) in 14 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 12.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 12 (groupBy at SingleReadBucket.scala:34) finished in 0.022 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 13)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.6 KB, free 67.3 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 69.6 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 13 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 1 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 11 ms on localhost (1/1)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 13 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 6 finished: first at ComparisonsSuite.scala:40, took 0.047411 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 3 is 158 bytes
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 7 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 15 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 14)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.6 KB, free 74.2 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 76.5 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 15 (MapPartitionsRDD[15] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 15.0 with 3 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 15.0 (TID 29, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 15.0 (TID 30, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 15.0 (TID 31, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 15.0 (TID 29)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 15.0 (TID 30)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 15.0 (TID 31)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 15.0 (TID 31). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 15.0 (TID 29). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 15.0 (TID 30). 1306 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 15.0 (TID 30) in 10 ms on localhost (1/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 15.0 (TID 29) in 10 ms on localhost (2/3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 15 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 15.0 (TID 31) in 11 ms on localhost (3/3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 7 finished: first at ComparisonsSuite.scala:40, took 0.020085 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 15.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 17 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 8 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 17 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 16)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 16)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 3.5 KB, free 80.0 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 1913.0 B, free 81.9 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:36770 (size: 1913.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 16 (MapPartitionsRDD[17] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 14 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 11 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 9 ms on localhost (3/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 12 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 16 (groupBy at SingleReadBucket.scala:34) finished in 0.020 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 17)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.6 KB, free 86.4 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 88.7 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 17 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 17.0 with 1 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 17.0 (TID 36, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 17.0 (TID 36)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 17.0 (TID 36). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 17.0 (TID 36) in 6 ms on localhost (1/1)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 17.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 17 (first at ComparisonsSuite.scala:40) finished in 0.007 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 8 finished: first at ComparisonsSuite.scala:40, took 0.038438 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 4 is 158 bytes
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 9 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 18)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.6 KB, free 93.3 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 95.6 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 19 (MapPartitionsRDD[19] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 3 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 37, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 38, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 39, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 37)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 39)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 38)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 39). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 37). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 38). 1306 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 37) in 10 ms on localhost (1/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 39) in 11 ms on localhost (2/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 38) in 11 ms on localhost (3/3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 19 (first at ComparisonsSuite.scala:40) finished in 0.012 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 9 finished: first at ComparisonsSuite.scala:40, took 0.019398 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 21 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 10 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 21 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 20)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 3.5 KB, free 99.1 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 1914.0 B, free 101.0 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:36770 (size: 1914.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 20 (MapPartitionsRDD[21] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 20.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 20.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 20.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 20.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 20.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 20.0 (TID 41)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 20.0 (TID 42)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 20.0 (TID 40)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 20.0 (TID 43)
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 20.0 (TID 42). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 20.0 (TID 41). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 20.0 (TID 40). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 20.0 (TID 42) in 25 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 20.0 (TID 40) in 30 ms on localhost (2/4)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 171
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 20.0 (TID 41) in 29 ms on localhost (3/4)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 170
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:36770 in memory (size: 1913.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 169
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned shuffle 4
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 168
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 20.0 (TID 43). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 167
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:36770 in memory (size: 1914.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 166
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 20.0 (TID 43) in 30 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 20 (groupBy at SingleReadBucket.scala:34) finished in 0.038 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 20.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 21)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.6 KB, free 60.4 KB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 165
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 164
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 54.0 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:36770 in memory (size: 1915.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 163
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 21 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 21.0 with 1 tasks
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned shuffle 2
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 21.0 (TID 44, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 162
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 21.0 (TID 44)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 161
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:36770 in memory (size: 1912.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 160
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned shuffle 1
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 159
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:36770 in memory (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 158
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:36770 in memory (size: 1915.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned accumulator 157
19/03/01 00:53:13 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 21.0 (TID 44). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 21.0 (TID 44) in 12 ms on localhost (1/1)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 21.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 21 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 10 finished: first at ComparisonsSuite.scala:40, took 0.064547 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 5 is 158 bytes
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 11 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 23 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 22)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.6 KB, free 16.8 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 19.1 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 23 (MapPartitionsRDD[23] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 23.0 with 3 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 23.0 (TID 45, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 23.0 (TID 46, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 23.0 (TID 47, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 23.0 (TID 46)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 23.0 (TID 47)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 23.0 (TID 45)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 23.0 (TID 47). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 23.0 (TID 46). 1306 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 23.0 (TID 47) in 6 ms on localhost (1/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 23.0 (TID 46) in 9 ms on localhost (2/3)
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 23.0 (TID 45). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 23.0 (TID 45) in 13 ms on localhost (3/3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 23 (first at ComparisonsSuite.scala:40) finished in 0.013 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 23.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 11 finished: first at ComparisonsSuite.scala:40, took 0.020096 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 25 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 12 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 24)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 3.5 KB, free 22.6 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 1915.0 B, free 24.5 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:36770 (size: 1915.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 24 (MapPartitionsRDD[25] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 24.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 24.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 24.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 24.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 24.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 24.0 (TID 50)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 24.0 (TID 49)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 24.0 (TID 51)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 24.0 (TID 48)
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 24.0 (TID 48). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 24.0 (TID 50). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 24.0 (TID 49). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 24.0 (TID 48) in 14 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 24.0 (TID 50) in 13 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 24.0 (TID 49) in 15 ms on localhost (3/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 24.0 (TID 51). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 24.0 (TID 51) in 19 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 24.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 24 (groupBy at SingleReadBucket.scala:34) finished in 0.025 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 25)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.6 KB, free 29.0 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 31.4 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 25 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 1 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 52, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 52)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 52). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 52) in 10 ms on localhost (1/1)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 25 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 12 finished: first at ComparisonsSuite.scala:40, took 0.051172 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 6 is 158 bytes
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 13 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 27 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 26)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.6 KB, free 35.9 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.2 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 27 (MapPartitionsRDD[27] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 27.0 with 3 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 27.0 (TID 53, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 27.0 (TID 54, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 27.0 (TID 55, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 27.0 (TID 55)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 27.0 (TID 54)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 27.0 (TID 53)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 27.0 (TID 55). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 27.0 (TID 53). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 27.0 (TID 54). 1306 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 27.0 (TID 55) in 6 ms on localhost (1/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 27.0 (TID 53) in 9 ms on localhost (2/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 27.0 (TID 54) in 8 ms on localhost (3/3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 27 (first at ComparisonsSuite.scala:40) finished in 0.009 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 27.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 13 finished: first at ComparisonsSuite.scala:40, took 0.017679 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 29 (groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 14 (first at ComparisonsSuite.scala:40) with 1 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 29 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 28)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 28)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 3.5 KB, free 41.7 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 1913.0 B, free 43.6 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:36770 (size: 1913.0 B, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 28 (MapPartitionsRDD[29] at groupBy at SingleReadBucket.scala:34)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 2012 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 2144 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 56)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 58)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 57)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 59)
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 57). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 58). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 56). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 57) in 11 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 58) in 10 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 56) in 14 ms on localhost (3/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 59). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 59) in 17 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 28 (groupBy at SingleReadBucket.scala:34) finished in 0.023 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 29)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.6 KB, free 48.2 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 50.5 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 29 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 29.0 with 1 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 29.0 (TID 60, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 29.0 (TID 60)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 29.0 (TID 60). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 29.0 (TID 60) in 11 ms on localhost (1/1)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 29.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 29 (first at ComparisonsSuite.scala:40) finished in 0.011 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 14 finished: first at ComparisonsSuite.scala:40, took 0.049075 s
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: first at ComparisonsSuite.scala:40
19/03/01 00:53:13 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 7 is 158 bytes
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 15 (first at ComparisonsSuite.scala:40) with 3 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (first at ComparisonsSuite.scala:40)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.6 KB, free 55.0 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 57.4 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:36770 (size: 2.3 KB, free: 509.2 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 3 missing tasks from ResultStage 31 (MapPartitionsRDD[31] at map at SingleReadBucket.scala:35)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 3 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 61, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 62, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 63, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 62)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 61)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 63)
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:13 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 61). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 62). 1306 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 63). 1171 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 61) in 7 ms on localhost (1/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 63) in 8 ms on localhost (2/3)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 62) in 9 ms on localhost (3/3)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 31 (first at ComparisonsSuite.scala:40) finished in 0.010 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 15 finished: first at ComparisonsSuite.scala:40, took 0.017593 s
19/03/01 00:53:13 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:13 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:13 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:13 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:13 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:13 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:13 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriver' on port 54027.
19/03/01 00:53:13 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:13 INFO Remoting: Starting remoting
19/03/01 00:53:13 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54028]
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54028.
19/03/01 00:53:13 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:13 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:13 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-9d145448-3eb3-4c0d-8e6e-bca38fbfdaef
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/03/01 00:53:13 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:13 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 41764.
19/03/01 00:53:13 INFO netty.NettyBlockTransferService: Server created on 41764
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:13 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:41764 with 521.6 MB RAM, BlockManagerId(driver, localhost, 41764)
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:13 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:13 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:13 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:13 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:13 INFO spark.SparkContext: Successfully stopped SparkContext
- Test base quality scores
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:13 WARN contamination.VariantSite: Failed to create observation for read null due to java.lang.StringIndexOutOfBoundsException: String index out of range: 0. Dropping...
19/03/01 00:53:13 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:13 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
VariantSiteSuite:
- read overlaps a site and agrees with the reference
- read overlaps a site and agrees with the alt
- read overlaps a site and is an other-alt
- read has no bases and should fail on conversion
ReadStatsSuite:
- perfect read
- noQualRead should be equivalent to the perfect read, and should not NPE
- read failed vendor qc
- read is a dupe
- all of the bases in a read are low quality
- the start/end of the read have low quality scores
- read's mapping quality is zero
- read is mapped with low, but non-zero mapping quality
- first-of-pair read overlaps mate
- second-of-pair read overlaps mate
- unpaired, but otherwise perfect read
- merge two read stats instances
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriver' on port 52935.
19/03/01 00:53:13 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:13 INFO Remoting: Starting remoting
19/03/01 00:53:13 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:52936]
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 52936.
19/03/01 00:53:13 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:13 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:13 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-c48fd288-0bd0-4e0f-8f55-d87a5d0a675e
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/03/01 00:53:13 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:13 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 32999.
19/03/01 00:53:13 INFO netty.NettyBlockTransferService: Server created on 32999
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:13 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:32999 with 521.6 MB RAM, BlockManagerId(driver, localhost, 32999)
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: reduce at ReadStats.scala:253
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 0 (reduce at ReadStats.scala:253) with 4 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at ReadStats.scala:253)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at ReadStats.scala:252), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.2 KB, free 2.2 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1430.0 B, free 3.6 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:32999 (size: 1430.0 B, free: 521.6 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at ReadStats.scala:252)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2290 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2422 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2290 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2422 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 952 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 952 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 952 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 952 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 14 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 21 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 24 ms on localhost (3/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 29 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at ReadStats.scala:253) finished in 0.031 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 0 finished: reduce at ReadStats.scala:253, took 0.043466 s
19/03/01 00:53:13 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:13 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:13 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:13 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:13 INFO spark.SparkContext: Successfully stopped SparkContext
- run an aggregate across all reads
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:13 WARN rna.RNASeqAlignmentCounts: Found unknown feature type random. Ignoring.
19/03/01 00:53:13 WARN rna.RNASeqAlignmentCounts: Found unknown feature type SO:0000110. Ignoring.
19/03/01 00:53:13 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:13 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
RNASeqAlignmentCountsSuite:
- should get an intergenic count if we pass a None
- should get an intragenic count if we pass a transcript
- should get an exonic count if we pass an exon
- should get an intronic count if we pass an intron
- should get an rRNA count if we pass an rRNA site
- should get nothing if we pass a random feature
- should get an intragenic count if we pass an SO transcript
- should get an exonic count if we pass an SO exon
- should get an intronic count if we pass an SO intron
- should get an rRNA count if we pass an SO rRNA site
- should get nothing if we pass a random SO feature
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriver' on port 58512.
19/03/01 00:53:13 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:13 INFO Remoting: Starting remoting
19/03/01 00:53:13 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:58513]
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 58513.
19/03/01 00:53:13 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:13 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:13 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-6dab683f-dfca-4f91-963a-bcb1ba1bf278
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/03/01 00:53:13 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:13 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 38473.
19/03/01 00:53:13 INFO netty.NettyBlockTransferService: Server created on 38473
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:13 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:38473 with 521.6 MB RAM, BlockManagerId(driver, localhost, 38473)
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: reduce at RNASeqAlignmentCounts.scala:72
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 0 (reduce at RNASeqAlignmentCounts.scala:72) with 4 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (reduce at RNASeqAlignmentCounts.scala:72)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at flatMap at RNASeqAlignmentCounts.scala:71), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2032.0 B, free 2032.0 B)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1266.0 B, free 3.2 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:38473 (size: 1266.0 B, free: 521.6 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at flatMap at RNASeqAlignmentCounts.scala:71)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2014 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2054 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2067 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2087 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 937 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 937 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 937 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 937 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 22 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 19 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 17 ms on localhost (3/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 23 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ResultStage 0 (reduce at RNASeqAlignmentCounts.scala:72) finished in 0.027 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Job 0 finished: reduce at RNASeqAlignmentCounts.scala:72, took 0.037763 s
19/03/01 00:53:13 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:13 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:13 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:13 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:13 INFO spark.SparkContext: Successfully stopped SparkContext
- run aggregate
19/03/01 00:53:13 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:13 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:13 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:13 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:13 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
GenotypeConcordanceRDDFunctionsSuite:
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriver' on port 54803.
19/03/01 00:53:13 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:13 INFO Remoting: Starting remoting
19/03/01 00:53:13 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54804]
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54804.
19/03/01 00:53:13 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:13 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:13 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-dd26e8bb-d22c-42a5-aab5-98325ca5f8e5
19/03/01 00:53:13 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/03/01 00:53:13 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:13 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:13 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40205.
19/03/01 00:53:13 INFO netty.NettyBlockTransferService: Server created on 40205
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:13 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40205 with 521.6 MB RAM, BlockManagerId(driver, localhost, 40205)
19/03/01 00:53:13 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:13 INFO spark.SparkContext: Starting job: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 3 (keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Registering RDD 12 (union at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Got job 0 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42) with 8 output partitions
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 3)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.8 KB, free 2.8 KB)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1705.0 B, free 4.5 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40205 (size: 1705.0 B, free: 521.6 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[3] at keyBy at GenotypeConcordanceRDDFunctions.scala:49), which has no missing parents
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.8 KB, free 7.4 KB)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1709.0 B, free 9.0 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40205 (size: 1709.0 B, free: 521.6 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[3] at keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 2.8 KB, free 11.9 KB)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:13 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1676.0 B, free 13.5 KB)
19/03/01 00:53:13 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40205 (size: 1676.0 B, free: 521.6 MB)
19/03/01 00:53:13 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:13 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 26 ms on localhost (1/4)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 27 ms on localhost (2/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 37 ms on localhost (3/4)
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 15 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 13 ms on localhost (2/4)
19/03/01 00:53:13 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:13 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:13 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 33 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.043 s
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 1, ShuffleMapStage 2)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 14 ms on localhost (3/4)
19/03/01 00:53:13 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:13 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 7 ms on localhost (1/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 9 ms on localhost (2/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 6 ms on localhost (3/4)
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 13 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at GenotypeConcordanceRDDFunctions.scala:49) finished in 0.035 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:13 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1090 bytes result sent to driver
19/03/01 00:53:13 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 15 ms on localhost (4/4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.035 s
19/03/01 00:53:13 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:13 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:13 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:13 INFO scheduler.DAGScheduler: waiting: Set(ShuffleMapStage 3, ResultStage 4)
19/03/01 00:53:13 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (UnionRDD[12] at union at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 4.7 KB, free 18.2 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.4 KB, free 20.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:40205 (size: 2.4 KB, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ShuffleMapStage 3 (UnionRDD[12] at union at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 8 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 3.0 (TID 16, localhost, partition 4,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 4.0 in stage 3.0 (TID 16)
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 3.0 (TID 17, localhost, partition 5,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 5.0 in stage 3.0 (TID 17)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 3.0 (TID 18, localhost, partition 6,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO executor.Executor: Running task 6.0 in stage 3.0 (TID 18)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 20 ms on localhost (1/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 17 ms on localhost (2/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 17 ms on localhost (3/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 3.0 (TID 19, localhost, partition 7,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 7.0 in stage 3.0 (TID 19)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 20 ms on localhost (4/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 4.0 in stage 3.0 (TID 16). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 6.0 in stage 3.0 (TID 18). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 3.0 (TID 16) in 13 ms on localhost (5/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 3.0 (TID 18) in 10 ms on localhost (6/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 5.0 in stage 3.0 (TID 17). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 3.0 (TID 17) in 13 ms on localhost (7/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 7.0 in stage 3.0 (TID 19). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 3.0 (TID 19) in 13 ms on localhost (8/8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (union at GenotypeConcordanceRDDFunctions.scala:65) finished in 0.036 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (ShuffledRDD[13] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 2.6 KB, free 23.1 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 1474.0 B, free 24.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:40205 (size: 1474.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ResultStage 4 (ShuffledRDD[13] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 8 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 4.0 (TID 20, localhost, partition 5,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 21, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 22, localhost, partition 1,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 23, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 5.0 in stage 4.0 (TID 20)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 23)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 22)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 21)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 23). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 24, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 24)
19/03/01 00:53:14 INFO executor.Executor: Finished task 5.0 in stage 4.0 (TID 20). 1217 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 4.0 (TID 25, localhost, partition 4,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 21). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 22). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Running task 4.0 in stage 4.0 (TID 25)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 4.0 (TID 26, localhost, partition 6,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Running task 6.0 in stage 4.0 (TID 26)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 4.0 (TID 27, localhost, partition 7,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 7.0 in stage 4.0 (TID 27)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 23) in 6 ms on localhost (1/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 4.0 (TID 20) in 8 ms on localhost (2/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 21) in 8 ms on localhost (3/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 24). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 22) in 10 ms on localhost (4/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 7.0 in stage 4.0 (TID 27). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 6.0 in stage 4.0 (TID 26). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 24) in 5 ms on localhost (5/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 4.0 (TID 27) in 5 ms on localhost (6/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 4.0 (TID 26) in 5 ms on localhost (7/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 4.0 in stage 4.0 (TID 25). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 4.0 (TID 25) in 10 ms on localhost (8/8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 4 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42) finished in 0.016 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 0 finished: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:42, took 0.147600 s
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 19 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 17 (keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 19 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 26 (union at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 1 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50) with 8 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 9 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 5 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 2.8 KB, free 27.4 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 1711.0 B, free 29.1 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:40205 (size: 1711.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 5 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 6 (MapPartitionsRDD[17] at keyBy at GenotypeConcordanceRDDFunctions.scala:49), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 2.8 KB, free 31.9 KB)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1707.0 B, free 33.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:40205 (size: 1707.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 5.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 6 (MapPartitionsRDD[17] at keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 6.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 5.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 28)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 5.0 (TID 30)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 29)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 7 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 5.0 (TID 31)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 2.8 KB, free 36.4 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 1680.0 B, free 38.1 KB)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 28). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 5.0 (TID 30). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:40205 (size: 1680.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 7 (MapPartitionsRDD[19] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 4 tasks
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 29). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 6.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 6.0 (TID 32)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 6.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 28) in 27 ms on localhost (1/4)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 6.0 (TID 33)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:40205 in memory (size: 1705.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 6.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 6.0 (TID 34)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 5.0 (TID 30) in 25 ms on localhost (2/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 5.0 (TID 31). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 6.0 (TID 33). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 6.0 (TID 32). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned accumulator 183
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned shuffle 3
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned shuffle 2
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned shuffle 1
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned accumulator 184
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 6.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 6.0 (TID 35)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 29) in 29 ms on localhost (3/4)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:40205 in memory (size: 1474.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned accumulator 187
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 36)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:40205 in memory (size: 2.4 KB, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned accumulator 186
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Removed broadcast_2_piece0 on localhost:40205 in memory (size: 1676.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.ContextCleaner: Cleaned accumulator 185
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:40205 in memory (size: 1709.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 37)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 5.0 (TID 31) in 31 ms on localhost (4/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 6.0 (TID 34). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 6.0 (TID 33) in 11 ms on localhost (1/4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.036 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 6, ShuffleMapStage 7)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9, ShuffleMapStage 8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 36). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 38)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 6.0 (TID 32) in 29 ms on localhost (2/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 37). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 7.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 7.0 (TID 39)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 6.0 (TID 34) in 13 ms on localhost (3/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 38). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 6.0 (TID 35). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 37) in 8 ms on localhost (1/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 36) in 10 ms on localhost (2/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 38) in 7 ms on localhost (3/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 6.0 (TID 35) in 14 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 6.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 6 (keyBy at GenotypeConcordanceRDDFunctions.scala:49) finished in 0.038 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 7)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9, ShuffleMapStage 8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 7.0 (TID 39). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 7.0 (TID 39) in 14 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 7 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.027 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9, ShuffleMapStage 8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 8 (UnionRDD[26] at union at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.7 KB, free 18.2 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.4 KB, free 20.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:40205 (size: 2.4 KB, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ShuffleMapStage 8 (UnionRDD[26] at union at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 8.0 with 8 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 8.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 8.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 8.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 8.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 8.0 (TID 40)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 8.0 (TID 41)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 8.0 (TID 42)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 8.0 (TID 43)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 8.0 (TID 40). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 8.0 (TID 42). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 8.0 (TID 41). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 8.0 (TID 44, localhost, partition 4,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 4.0 in stage 8.0 (TID 44)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 8.0 (TID 45, localhost, partition 5,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 5.0 in stage 8.0 (TID 45)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 8.0 (TID 46, localhost, partition 6,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 6.0 in stage 8.0 (TID 46)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 8.0 (TID 42) in 13 ms on localhost (1/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 8.0 (TID 40) in 14 ms on localhost (2/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 8.0 (TID 41) in 16 ms on localhost (3/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 5.0 in stage 8.0 (TID 45). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 4.0 in stage 8.0 (TID 44). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 6.0 in stage 8.0 (TID 46). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 8.0 (TID 47, localhost, partition 7,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 7.0 in stage 8.0 (TID 47)
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 8.0 (TID 43). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 8.0 (TID 45) in 10 ms on localhost (4/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 8.0 (TID 46) in 10 ms on localhost (5/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 8.0 (TID 44) in 12 ms on localhost (6/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 8.0 (TID 43) in 23 ms on localhost (7/8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 7.0 in stage 8.0 (TID 47). 1310 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 8.0 (TID 47) in 14 ms on localhost (8/8)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 8.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 8 (union at GenotypeConcordanceRDDFunctions.scala:65) finished in 0.035 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 9)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 9 (ShuffledRDD[27] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 2.6 KB, free 23.1 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 1475.0 B, free 24.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:40205 (size: 1475.0 B, free: 521.6 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 8 missing tasks from ResultStage 9 (ShuffledRDD[27] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 9.0 with 8 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 5.0 in stage 9.0 (TID 48, localhost, partition 5,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 9.0 (TID 49, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 9.0 (TID 50, localhost, partition 1,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 9.0 (TID 51, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 9.0 (TID 49)
19/03/01 00:53:14 INFO executor.Executor: Running task 5.0 in stage 9.0 (TID 48)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 9.0 (TID 51)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 9.0 (TID 50)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 9.0 (TID 51). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 5.0 in stage 9.0 (TID 48). 1217 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 9.0 (TID 52, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 9.0 (TID 52)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 4.0 in stage 9.0 (TID 53, localhost, partition 4,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 4.0 in stage 9.0 (TID 53)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 9.0 (TID 51) in 6 ms on localhost (1/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 5.0 in stage 9.0 (TID 48) in 7 ms on localhost (2/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 9.0 (TID 50). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 9.0 (TID 49). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 6.0 in stage 9.0 (TID 54, localhost, partition 6,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 6.0 in stage 9.0 (TID 54)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 7.0 in stage 9.0 (TID 55, localhost, partition 7,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 7.0 in stage 9.0 (TID 55)
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 9.0 (TID 52). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 4.0 in stage 9.0 (TID 53). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 8 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 9.0 (TID 49) in 10 ms on localhost (3/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 9.0 (TID 50) in 10 ms on localhost (4/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 4.0 in stage 9.0 (TID 53) in 5 ms on localhost (5/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 9.0 (TID 52) in 5 ms on localhost (6/8)
19/03/01 00:53:14 INFO executor.Executor: Finished task 6.0 in stage 9.0 (TID 54). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 7.0 in stage 9.0 (TID 55). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 6.0 in stage 9.0 (TID 54) in 5 ms on localhost (7/8)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 7.0 in stage 9.0 (TID 55) in 5 ms on localhost (8/8)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 9 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50) finished in 0.013 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 9.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 1 finished: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:50, took 0.127665 s
19/03/01 00:53:14 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:14 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:14 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:14 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:14 INFO spark.SparkContext: Successfully stopped SparkContext
- concordance of identical and non-identical genotypes
19/03/01 00:53:14 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:14 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriver' on port 51308.
19/03/01 00:53:14 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:14 INFO Remoting: Starting remoting
19/03/01 00:53:14 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:51309]
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 51309.
19/03/01 00:53:14 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:14 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:14 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-69df220f-26ff-4326-9c34-ac61153abc42
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:14 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:14 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 41510.
19/03/01 00:53:14 INFO netty.NettyBlockTransferService: Server created on 41510
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:14 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:41510 with 522.0 MB RAM, BlockManagerId(driver, localhost, 41510)
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:14 INFO rdd.ADAMContext: Loading /home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf as VCF, and converting to Genotypes. Projection is ignored.
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 33.1 KB, free 33.1 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 3.7 KB, free 36.8 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:41510 (size: 3.7 KB, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 0 from newAPIHadoopFile at ADAMContext.scala:586
19/03/01 00:53:14 INFO input.FileInputFormat: Total input paths to process : 1
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: count at GenotypeConcordanceRDDFunctionsSuite.scala:60
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 0 (count at GenotypeConcordanceRDDFunctionsSuite.scala:60) with 1 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (count at GenotypeConcordanceRDDFunctionsSuite.scala:60)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[3] at filter at GenotypeConcordanceRDDFunctionsSuite.scala:60), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.1 KB, free 39.9 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1853.0 B, free 41.7 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:41510 (size: 1853.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 0 (MapPartitionsRDD[3] at filter at GenotypeConcordanceRDDFunctionsSuite.scala:60)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 1 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2260 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:14 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 2057 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 49 ms on localhost (1/1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 0 (count at GenotypeConcordanceRDDFunctionsSuite.scala:60) finished in 0.049 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 0 finished: count at GenotypeConcordanceRDDFunctionsSuite.scala:60, took 0.056177 s
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 5 (keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 7 (keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 14 (union at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 1 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62) with 2 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 5 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 4.1 KB, free 45.8 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 2.3 KB, free 48.1 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:41510 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 1 tasks
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:49), which has no missing parents
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 1, localhost, partition 0,PROCESS_LOCAL, 2249 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 1)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 4.1 KB, free 52.2 KB)
19/03/01 00:53:14 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.3 KB, free 54.4 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:41510 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[5] at keyBy at GenotypeConcordanceRDDFunctions.scala:49)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 1 tasks
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51), which has no missing parents
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 2, localhost, partition 0,PROCESS_LOCAL, 2249 bytes)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 4.1 KB, free 58.5 KB)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 2)
19/03/01 00:53:14 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.3 KB, free 60.8 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:41510 (size: 2.3 KB, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[7] at keyBy at GenotypeConcordanceRDDFunctions.scala:51)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 1 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 3, localhost, partition 0,PROCESS_LOCAL, 2249 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 3)
19/03/01 00:53:14 INFO rdd.NewHadoopRDD: Input split: file:/home/jenkins/workspace/quinine/hadoop.version/1.0.4/label/centos/quinine-core/target/scala-2.10.4/test-classes/small.vcf:0+15651
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 1). 2237 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 1) in 25 ms on localhost (1/1)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 2). 2237 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.025 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 2, ShuffleMapStage 3)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5, ShuffleMapStage 4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 2) in 23 ms on localhost (1/1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (keyBy at GenotypeConcordanceRDDFunctions.scala:49) finished in 0.023 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5, ShuffleMapStage 4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 3). 2237 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 3) in 23 ms on localhost (1/1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (keyBy at GenotypeConcordanceRDDFunctions.scala:51) finished in 0.024 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5, ShuffleMapStage 4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 4 (UnionRDD[14] at union at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 4.7 KB, free 65.5 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.4 KB, free 67.9 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:41510 (size: 2.4 KB, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 2 missing tasks from ShuffleMapStage 4 (UnionRDD[14] at union at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 2 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2065 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2173 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 4)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 5)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 1 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 4). 1304 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 4) in 43 ms on localhost (1/2)
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 5). 1304 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 5) in 52 ms on localhost (2/2)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 4 (union at GenotypeConcordanceRDDFunctions.scala:65) finished in 0.053 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (ShuffledRDD[15] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 2.6 KB, free 70.4 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 1475.0 B, free 71.9 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:41510 (size: 1475.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 2 missing tasks from ResultStage 5 (ShuffledRDD[15] at combineByKey at GenotypeConcordanceRDDFunctions.scala:65)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 2 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 6, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 5.0 (TID 7, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 5.0 (TID 7)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 6)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 2 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 2 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 5.0 (TID 6). 1217 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 5.0 (TID 7). 1257 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 5.0 (TID 6) in 7 ms on localhost (1/2)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 5.0 (TID 7) in 6 ms on localhost (2/2)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 5 (collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62) finished in 0.007 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 1 finished: collectAsMap at GenotypeConcordanceRDDFunctionsSuite.scala:62, took 0.115846 s
19/03/01 00:53:14 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:14 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:14 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:14 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:14 INFO spark.SparkContext: Successfully stopped SparkContext
- concordance of identical VCFs should be 1.0
19/03/01 00:53:14 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:14 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
GenotypesSummarySuite:
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriver' on port 50171.
19/03/01 00:53:14 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:14 INFO Remoting: Starting remoting
19/03/01 00:53:14 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:50172]
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 50172.
19/03/01 00:53:14 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:14 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:14 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-447e184f-82f1-45d6-b6e4-6c523e25214f
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:14 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:14 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40625.
19/03/01 00:53:14 INFO netty.NettyBlockTransferService: Server created on 40625
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:14 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40625 with 522.0 MB RAM, BlockManagerId(driver, localhost, 40625)
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: fold at GenotypesSummary.scala:196
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 0 (fold at GenotypesSummary.scala:196) with 4 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (fold at GenotypesSummary.scala:196)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.1 KB, free 2.1 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1295.0 B, free 3.4 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40625 (size: 1295.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2220 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2287 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2287 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2287 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1138 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1138 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1135 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1240 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 25 ms on localhost (1/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 36 ms on localhost (2/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 34 ms on localhost (3/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 30 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 0 (fold at GenotypesSummary.scala:196) finished in 0.039 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 0 finished: fold at GenotypesSummary.scala:196, took 0.049374 s
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: countByValue at GenotypesSummary.scala:202
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 5 (countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 1 (countByValue at GenotypesSummary.scala:202) with 4 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.4 KB, free 6.7 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1878.0 B, free 8.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40625 (size: 1878.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2209 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2276 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2276 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2276 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 20 ms on localhost (1/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 18 ms on localhost (2/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 14 ms on localhost (3/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 16 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (countByValue at GenotypesSummary.scala:202) finished in 0.025 s
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 2.6 KB, free 11.2 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1583.0 B, free 12.8 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40625 (size: 1583.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 2 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 3 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1159 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1300 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 10 ms on localhost (1/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1159 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1229 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 13 ms on localhost (2/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 15 ms on localhost (3/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 17 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 2 (countByValue at GenotypesSummary.scala:202) finished in 0.017 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 1 finished: countByValue at GenotypesSummary.scala:202, took 0.060542 s
19/03/01 00:53:14 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:14 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:14 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:14 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:14 INFO spark.SparkContext: Successfully stopped SparkContext
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
- simple genotypes summary
19/03/01 00:53:14 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:14 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriver' on port 51385.
19/03/01 00:53:14 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:14 INFO Remoting: Starting remoting
19/03/01 00:53:14 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:51386]
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 51386.
19/03/01 00:53:14 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:14 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:14 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-16897bcd-1603-48db-ab54-88a9987fd942
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:14 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:14 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 39133.
19/03/01 00:53:14 INFO netty.NettyBlockTransferService: Server created on 39133
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:14 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:39133 with 522.0 MB RAM, BlockManagerId(driver, localhost, 39133)
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: fold at GenotypesSummary.scala:196
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 0 (fold at GenotypesSummary.scala:196) with 4 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (fold at GenotypesSummary.scala:196)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.1 KB, free 2.1 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1295.0 B, free 3.4 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:39133 (size: 1295.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 0 (MapPartitionsRDD[1] at map at GenotypesSummary.scala:195)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2016 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2016 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2016 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2083 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 915 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 915 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 14 ms on localhost (1/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 915 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 21 ms on localhost (2/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 20 ms on localhost (3/4)
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1065 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 21 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 0 (fold at GenotypesSummary.scala:196) finished in 0.030 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 0 finished: fold at GenotypesSummary.scala:196, took 0.041620 s
19/03/01 00:53:14 INFO spark.SparkContext: Starting job: countByValue at GenotypesSummary.scala:202
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Registering RDD 5 (countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Got job 1 (countByValue at GenotypesSummary.scala:202) with 4 output partitions
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Final stage: ResultStage 2 (countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 1)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 3.4 KB, free 6.7 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1878.0 B, free 8.6 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:39133 (size: 1878.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 1 (MapPartitionsRDD[5] at countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,PROCESS_LOCAL, 2005 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,PROCESS_LOCAL, 2072 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1090 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 10 ms on localhost (1/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 10 ms on localhost (2/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 12 ms on localhost (3/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 9 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ShuffleMapStage 1 (countByValue at GenotypesSummary.scala:202) finished in 0.012 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:14 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 2)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202), which has no missing parents
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 2.6 KB, free 11.2 KB)
19/03/01 00:53:14 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 1583.0 B, free 12.8 KB)
19/03/01 00:53:14 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:39133 (size: 1583.0 B, free: 522.0 MB)
19/03/01 00:53:14 INFO spark.SparkContext: Created broadcast 2 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 2 (ShuffledRDD[6] at countByValue at GenotypesSummary.scala:202)
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:14 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:14 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:14 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:14 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:14 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1124 bytes result sent to driver
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 5 ms on localhost (1/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 6 ms on localhost (2/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 7 ms on localhost (3/4)
19/03/01 00:53:14 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 6 ms on localhost (4/4)
19/03/01 00:53:14 INFO scheduler.DAGScheduler: ResultStage 2 (countByValue at GenotypesSummary.scala:202) finished in 0.007 s
19/03/01 00:53:14 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:14 INFO scheduler.DAGScheduler: Job 1 finished: countByValue at GenotypesSummary.scala:202, took 0.029300 s
19/03/01 00:53:14 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:14 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:14 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:14 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:14 INFO spark.SparkContext: Successfully stopped SparkContext
- empty genotypes summary
19/03/01 00:53:14 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:14 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:14 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:14 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
CoverageStatsSuite:
- take simple mean of all equally weighted points
- take simple mean of inequally weighted points
- take simple median of all equally weighted points
- take simple median of inequally weighted points
- take median when it lies between points
- covered at 0 should return all sites
- covered at 2 should return fewer sites
- covered at 5 should return no sites
GeneratorFilterSuite:
- CombinedFilter combines two independent filters
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriver' on port 56920.
ReadCoverageSuite:
- unmapped reads should emit no coverage observations
- generate coverage observations for a mapped read
19/03/01 00:53:14 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:14 INFO Remoting: Starting remoting
19/03/01 00:53:14 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:56921]
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 56921.
19/03/01 00:53:14 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:14 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:14 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-9bae835d-e704-4048-9845-d0ce2eb94ff8
19/03/01 00:53:14 INFO storage.MemoryStore: MemoryStore started with capacity 522.0 MB
19/03/01 00:53:14 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:14 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:14 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 38317.
19/03/01 00:53:14 INFO netty.NettyBlockTransferService: Server created on 38317
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:14 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:38317 with 522.0 MB RAM, BlockManagerId(driver, localhost, 38317)
19/03/01 00:53:14 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: collect at ReadCoverageSuite.scala:70
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Registering RDD 1 (flatMap at ReadCoverage.scala:59)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 0 (collect at ReadCoverageSuite.scala:70) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (collect at ReadCoverageSuite.scala:70)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[1] at flatMap at ReadCoverage.scala:59), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 2.7 KB, free 2.7 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 1681.0 B, free 4.4 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:38317 (size: 1681.0 B, free: 522.0 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[1] at flatMap at ReadCoverage.scala:59)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2216 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2216 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2216 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2216 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 23 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 29 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 28 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 27 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (flatMap at ReadCoverage.scala:59) finished in 0.033 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:15 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (ShuffledRDD[2] at reduceByKey at ReadCoverage.scala:60), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 2.8 KB, free 7.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 1708.0 B, free 8.8 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:38317 (size: 1708.0 B, free: 522.0 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 1 (ShuffledRDD[2] at reduceByKey at ReadCoverage.scala:60)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 4, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 5, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 6, localhost, partition 0,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 7, localhost, partition 2,PROCESS_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 5)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 6)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 4)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 7)
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 0 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 7). 1124 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 7) in 6 ms on localhost (1/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 5). 1271 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 6). 1124 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 4). 1292 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 6) in 8 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 5) in 9 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 4) in 10 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 1 (collect at ReadCoverageSuite.scala:70) finished in 0.010 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 0 finished: collect at ReadCoverageSuite.scala:70, took 0.066676 s
19/03/01 00:53:15 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:15 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:15 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:15 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:15 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:15 INFO spark.SparkContext: Successfully stopped SparkContext
- generate coverage observations for several mapped reads, and an unaligned read
19/03/01 00:53:15 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:15 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:15 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:15 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
ContaminationEstimatorSuite:
19/03/01 00:53:15 INFO util.Utils: Successfully started service 'sparkDriver' on port 54006.
19/03/01 00:53:15 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:15 INFO Remoting: Starting remoting
19/03/01 00:53:15 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54007]
19/03/01 00:53:15 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54007.
19/03/01 00:53:15 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:15 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:15 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-713fe0aa-00f4-4bb6-95e6-8f8b3ac82057
19/03/01 00:53:15 INFO storage.MemoryStore: MemoryStore started with capacity 521.3 MB
19/03/01 00:53:15 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:15 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:15 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 40797.
19/03/01 00:53:15 INFO netty.NettyBlockTransferService: Server created on 40797
19/03/01 00:53:15 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:15 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:40797 with 521.3 MB RAM, BlockManagerId(driver, localhost, 40797)
19/03/01 00:53:15 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 0 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (collect at BroadcastRegionJoin.scala:100)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 4.1 KB, free 4.1 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 2.2 KB, free 6.3 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:40797 (size: 2.2 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2128 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 11 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 14 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (3/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 15 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.019 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:15 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.9 KB, free 11.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.5 KB, free 13.7 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:40797 (size: 2.5 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 1.0 (TID 4, localhost, partition 0,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 1.0 (TID 5, localhost, partition 1,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 1.0 (TID 6, localhost, partition 2,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 1.0 (TID 7, localhost, partition 3,NODE_LOCAL, 1894 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 1.0 (TID 4)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 1.0 (TID 7)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 1.0 (TID 6)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 1.0 (TID 5)
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 1.0 (TID 7). 1124 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 1.0 (TID 4). 1124 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 1.0 (TID 5). 1124 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 1.0 (TID 6). 1228 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 1.0 (TID 7) in 7 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 1.0 (TID 4) in 7 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 1.0 (TID 5) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 1.0 (TID 6) in 9 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 1.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 1 (collect at BroadcastRegionJoin.scala:100) finished in 0.010 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 0 finished: collect at BroadcastRegionJoin.scala:100, took 0.044389 s
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_2 stored as values in memory (estimated size 216.0 B, free 13.9 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_2_piece0 stored as bytes in memory (estimated size 124.0 B, free 14.0 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_2_piece0 in memory on localhost:40797 (size: 124.0 B, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 2 from broadcast at BroadcastRegionJoin.scala:109
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: count at ContaminationEstimator.scala:85
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Registering RDD 8 (map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Registering RDD 10 (flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 1 (count at ContaminationEstimator.scala:85) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 4 (count at ContaminationEstimator.scala:85)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 2, ShuffleMapStage 3)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 2, ShuffleMapStage 3)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 2 (MapPartitionsRDD[8] at map at BroadcastRegionJoin.scala:113), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_3 stored as values in memory (estimated size 3.5 KB, free 17.5 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_3_piece0 stored as bytes in memory (estimated size 2.1 KB, free 19.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_3_piece0 in memory on localhost:40797 (size: 2.1 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 3 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 2 (MapPartitionsRDD[8] at map at BroadcastRegionJoin.scala:113)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 2.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 3 (MapPartitionsRDD[10] at flatMap at BroadcastRegionJoin.scala:118), which has no missing parents
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 2.0 (TID 8, localhost, partition 0,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_4 stored as values in memory (estimated size 3.9 KB, free 23.5 KB)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 2.0 (TID 9, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_4_piece0 stored as bytes in memory (estimated size 2.2 KB, free 25.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_4_piece0 in memory on localhost:40797 (size: 2.2 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 4 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 2.0 (TID 10, localhost, partition 2,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 3 (MapPartitionsRDD[10] at flatMap at BroadcastRegionJoin.scala:118)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 3.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 2.0 (TID 11, localhost, partition 3,PROCESS_LOCAL, 2128 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 2.0 (TID 11)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 2.0 (TID 9)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 2.0 (TID 8)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 2.0 (TID 10)
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 2.0 (TID 9). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 2.0 (TID 8). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 3.0 (TID 12, localhost, partition 0,PROCESS_LOCAL, 2279 bytes)
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 2.0 (TID 10). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 3.0 (TID 12)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 3.0 (TID 13, localhost, partition 1,PROCESS_LOCAL, 2411 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 3.0 (TID 13)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 2.0 (TID 9) in 16 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 3.0 (TID 14, localhost, partition 2,PROCESS_LOCAL, 2279 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 3.0 (TID 14)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 2.0 (TID 8) in 23 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 2.0 (TID 10) in 15 ms on localhost (3/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 2.0 (TID 11). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 3.0 (TID 15, localhost, partition 3,PROCESS_LOCAL, 2411 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 3.0 (TID 15)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 2.0 (TID 11) in 17 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ShuffleMapStage 2 (map at BroadcastRegionJoin.scala:113) finished in 0.028 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 2.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: running: Set(ShuffleMapStage 3)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 3.0 (TID 12). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 3.0 (TID 13). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 3.0 (TID 12) in 13 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 3.0 (TID 13) in 11 ms on localhost (2/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 3.0 (TID 14). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 3.0 (TID 15). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 3.0 (TID 14) in 14 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 3.0 (TID 15) in 11 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ShuffleMapStage 3 (flatMap at BroadcastRegionJoin.scala:118) finished in 0.023 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 3.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:15 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 4 (MapPartitionsRDD[16] at flatMap at ContaminationEstimator.scala:78), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_5 stored as values in memory (estimated size 3.9 KB, free 29.5 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_5_piece0 stored as bytes in memory (estimated size 2.1 KB, free 31.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on localhost:40797 (size: 2.1 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 4 (MapPartitionsRDD[16] at flatMap at ContaminationEstimator.scala:78)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 4.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 4.0 (TID 16, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 4.0 (TID 17, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 4.0 (TID 18, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 4.0 (TID 19, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 4.0 (TID 17)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 4.0 (TID 16)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 4.0 (TID 19)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 4.0 (TID 18)
19/03/01 00:53:15 INFO spark.CacheManager: Partition rdd_16_2 not found, computing it
19/03/01 00:53:15 INFO spark.CacheManager: Partition rdd_16_3 not found, computing it
19/03/01 00:53:15 INFO spark.CacheManager: Partition rdd_16_0 not found, computing it
19/03/01 00:53:15 INFO spark.CacheManager: Partition rdd_16_1 not found, computing it
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 1 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Getting 4 non-empty blocks out of 4 blocks
19/03/01 00:53:15 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0 ms
19/03/01 00:53:15 INFO storage.MemoryStore: Block rdd_16_1 stored as values in memory (estimated size 16.0 B, free 31.6 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block rdd_16_3 stored as values in memory (estimated size 16.0 B, free 31.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added rdd_16_1 in memory on localhost:40797 (size: 16.0 B, free: 521.2 MB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block rdd_16_0 stored as values in memory (estimated size 16.0 B, free 31.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added rdd_16_3 in memory on localhost:40797 (size: 16.0 B, free: 521.2 MB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added rdd_16_0 in memory on localhost:40797 (size: 16.0 B, free: 521.2 MB)
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 4.0 (TID 17). 1703 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 4.0 (TID 19). 1703 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 4.0 (TID 16). 1703 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 4.0 (TID 17) in 10 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 4.0 (TID 19) in 10 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 4.0 (TID 16) in 11 ms on localhost (3/4)
19/03/01 00:53:15 INFO storage.MemoryStore: Block rdd_16_2 stored as values in memory (estimated size 616.0 B, free 32.2 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added rdd_16_2 in memory on localhost:40797 (size: 616.0 B, free: 521.2 MB)
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 4.0 (TID 18). 1703 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 4.0 (TID 18) in 16 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 4 (count at ContaminationEstimator.scala:85) finished in 0.016 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 4.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 1 finished: count at ContaminationEstimator.scala:85, took 0.069280 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 1 is 158 bytes
19/03/01 00:53:15 INFO spark.MapOutputTrackerMaster: Size of output statuses for shuffle 2 is 160 bytes
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 2 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 7 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 5, ShuffleMapStage 6)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 7 (MapPartitionsRDD[17] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_6 stored as values in memory (estimated size 4.4 KB, free 36.6 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_6_piece0 stored as bytes in memory (estimated size 2.3 KB, free 38.9 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_6_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 6 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 7 (MapPartitionsRDD[17] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 7.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 7.0 (TID 20, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 7.0 (TID 21, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 7.0 (TID 22, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 7.0 (TID 23, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 7.0 (TID 20)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 7.0 (TID 21)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 7.0 (TID 23)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 7.0 (TID 22)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 7.0 (TID 21). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 7.0 (TID 20). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 7.0 (TID 23). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 7.0 (TID 22). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 7.0 (TID 21) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 7.0 (TID 20) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 7.0 (TID 22) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 7.0 (TID 23) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 7 (reduce at ContaminationEstimator.scala:115) finished in 0.006 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 7.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 2 finished: reduce at ContaminationEstimator.scala:115, took 0.012250 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 3 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 10 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 9, ShuffleMapStage 8)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 10 (MapPartitionsRDD[18] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_7 stored as values in memory (estimated size 4.4 KB, free 43.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_7_piece0 stored as bytes in memory (estimated size 2.3 KB, free 45.5 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_7_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 7 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 10 (MapPartitionsRDD[18] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 10.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 10.0 (TID 24, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 10.0 (TID 25, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 10.0 (TID 26, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 10.0 (TID 27, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 10.0 (TID 24)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 10.0 (TID 26)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 10.0 (TID 27)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 10.0 (TID 25)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 10.0 (TID 24). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 10.0 (TID 25). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 10.0 (TID 27). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 10.0 (TID 26). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 10.0 (TID 25) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 10.0 (TID 27) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 10.0 (TID 24) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 10.0 (TID 26) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 10 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 10.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 3 finished: reduce at ContaminationEstimator.scala:115, took 0.011282 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 4 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 13 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 12, ShuffleMapStage 11)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 13 (MapPartitionsRDD[19] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_8 stored as values in memory (estimated size 4.4 KB, free 49.9 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_8_piece0 stored as bytes in memory (estimated size 2.3 KB, free 52.1 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_8_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 8 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 13 (MapPartitionsRDD[19] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 13.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 13.0 (TID 28, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 13.0 (TID 29, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 13.0 (TID 30, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 13.0 (TID 31, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 13.0 (TID 29)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 13.0 (TID 30)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 13.0 (TID 28)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 13.0 (TID 31)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 13.0 (TID 29). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 13.0 (TID 28). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 13.0 (TID 31). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 13.0 (TID 30). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 13.0 (TID 29) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 13.0 (TID 28) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 13.0 (TID 31) in 4 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 13.0 (TID 30) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 13 (reduce at ContaminationEstimator.scala:115) finished in 0.006 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 13.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 4 finished: reduce at ContaminationEstimator.scala:115, took 0.011770 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 5 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 16 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 15, ShuffleMapStage 14)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 16 (MapPartitionsRDD[20] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_9 stored as values in memory (estimated size 4.4 KB, free 56.5 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_9_piece0 stored as bytes in memory (estimated size 2.3 KB, free 58.7 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_9_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 9 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 16 (MapPartitionsRDD[20] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 16.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 16.0 (TID 32, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 16.0 (TID 33, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 16.0 (TID 34, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 16.0 (TID 35, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 16.0 (TID 34)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 16.0 (TID 32)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 16.0 (TID 33)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 16.0 (TID 35)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 16.0 (TID 35). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 16.0 (TID 32). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 16.0 (TID 33). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 16.0 (TID 34). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 16.0 (TID 35) in 3 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 16.0 (TID 32) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 16.0 (TID 33) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 16.0 (TID 34) in 6 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 16.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 16 (reduce at ContaminationEstimator.scala:115) finished in 0.006 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 5 finished: reduce at ContaminationEstimator.scala:115, took 0.012225 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 6 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 19 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 17, ShuffleMapStage 18)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 19 (MapPartitionsRDD[21] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_10 stored as values in memory (estimated size 4.4 KB, free 63.1 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_10_piece0 stored as bytes in memory (estimated size 2.3 KB, free 65.4 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_10_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 10 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 19 (MapPartitionsRDD[21] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 19.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 19.0 (TID 36, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 19.0 (TID 37, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 19.0 (TID 38, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 19.0 (TID 39, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 19.0 (TID 36)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 19.0 (TID 38)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 19.0 (TID 39)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 19.0 (TID 37)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 19.0 (TID 38). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 19.0 (TID 37). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 19.0 (TID 39). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 19.0 (TID 36). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 19.0 (TID 38) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 19.0 (TID 39) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 19.0 (TID 37) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 19.0 (TID 36) in 6 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 19 (reduce at ContaminationEstimator.scala:115) finished in 0.006 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 19.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 6 finished: reduce at ContaminationEstimator.scala:115, took 0.014972 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 7 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 22 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 20, ShuffleMapStage 21)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 22 (MapPartitionsRDD[22] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_11 stored as values in memory (estimated size 4.4 KB, free 69.7 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_11_piece0 stored as bytes in memory (estimated size 2.3 KB, free 72.0 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_11_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 11 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 22 (MapPartitionsRDD[22] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 22.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 22.0 (TID 40, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 22.0 (TID 41, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 22.0 (TID 42, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 22.0 (TID 43, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 22.0 (TID 41)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 22.0 (TID 42)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 22.0 (TID 40)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 22.0 (TID 43)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 22.0 (TID 41). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 22.0 (TID 43). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 22.0 (TID 42). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 22.0 (TID 40). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 22.0 (TID 41) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 22.0 (TID 42) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 22.0 (TID 43) in 4 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 22.0 (TID 40) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 22 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 22.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 7 finished: reduce at ContaminationEstimator.scala:115, took 0.010874 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 8 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 25 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 24, ShuffleMapStage 23)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 25 (MapPartitionsRDD[23] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_12 stored as values in memory (estimated size 4.4 KB, free 76.4 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_12_piece0 stored as bytes in memory (estimated size 2.3 KB, free 78.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_12_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 12 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 25 (MapPartitionsRDD[23] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 25.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 25.0 (TID 44, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 25.0 (TID 45, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 25.0 (TID 46, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 25.0 (TID 47, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 25.0 (TID 45)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 25.0 (TID 44)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 25.0 (TID 47)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 25.0 (TID 46)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 25.0 (TID 46). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 25.0 (TID 45). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 25.0 (TID 47). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 25.0 (TID 44). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 25.0 (TID 45) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 25.0 (TID 46) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 25.0 (TID 44) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 25.0 (TID 47) in 4 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 25 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 25.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 8 finished: reduce at ContaminationEstimator.scala:115, took 0.010903 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 9 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 28 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 27, ShuffleMapStage 26)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 28 (MapPartitionsRDD[24] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_13 stored as values in memory (estimated size 4.4 KB, free 83.0 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_13_piece0 stored as bytes in memory (estimated size 2.3 KB, free 85.2 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_13_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 13 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 28 (MapPartitionsRDD[24] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 28.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 28.0 (TID 48, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 28.0 (TID 49, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 28.0 (TID 50, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 28.0 (TID 51, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 28.0 (TID 49)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 28.0 (TID 48)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 28.0 (TID 51)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 28.0 (TID 50)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 28.0 (TID 49). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 28.0 (TID 51). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 28.0 (TID 50). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 28.0 (TID 48). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 28.0 (TID 49) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 28.0 (TID 50) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 28.0 (TID 51) in 4 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 28.0 (TID 48) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 28 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 28.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 9 finished: reduce at ContaminationEstimator.scala:115, took 0.011784 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 10 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 31 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 30, ShuffleMapStage 29)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 31 (MapPartitionsRDD[25] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_14 stored as values in memory (estimated size 4.4 KB, free 89.6 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_14_piece0 stored as bytes in memory (estimated size 2.3 KB, free 91.9 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_14_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 14 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 31 (MapPartitionsRDD[25] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 31.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 31.0 (TID 52, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 31.0 (TID 53, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 31.0 (TID 54, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 31.0 (TID 55, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 31.0 (TID 52)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 31.0 (TID 54)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 31.0 (TID 55)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 31.0 (TID 53)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 31.0 (TID 54). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 31.0 (TID 53). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 31.0 (TID 55). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 31.0 (TID 52). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 31.0 (TID 54) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 31.0 (TID 53) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 31.0 (TID 55) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 31.0 (TID 52) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 31.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 31 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 10 finished: reduce at ContaminationEstimator.scala:115, took 0.017940 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 11 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 34 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 33, ShuffleMapStage 32)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 34 (MapPartitionsRDD[26] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_15 stored as values in memory (estimated size 4.4 KB, free 96.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_15_piece0 stored as bytes in memory (estimated size 2.3 KB, free 98.5 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_15_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 15 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 34 (MapPartitionsRDD[26] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 34.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 34.0 (TID 56, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 34.0 (TID 57, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 34.0 (TID 58, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 34.0 (TID 59, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 34.0 (TID 56)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 34.0 (TID 57)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 34.0 (TID 59)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 34.0 (TID 58)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 34.0 (TID 59). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 34.0 (TID 58). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 34.0 (TID 57). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 34.0 (TID 56). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 34.0 (TID 58) in 8 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 34.0 (TID 57) in 8 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 34.0 (TID 59) in 9 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 34.0 (TID 56) in 10 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 34 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 34.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 11 finished: reduce at ContaminationEstimator.scala:115, took 0.018366 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 12 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 37 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 35, ShuffleMapStage 36)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 37 (MapPartitionsRDD[27] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_16 stored as values in memory (estimated size 4.4 KB, free 102.9 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_16_piece0 stored as bytes in memory (estimated size 2.3 KB, free 105.1 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_16_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 16 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 37 (MapPartitionsRDD[27] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 37.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 37.0 (TID 60, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 37.0 (TID 61, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 37.0 (TID 62, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 37.0 (TID 63, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 37.0 (TID 61)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 37.0 (TID 60)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 37.0 (TID 62)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 37.0 (TID 63)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 37.0 (TID 61). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 37.0 (TID 60). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 37.0 (TID 62). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 37.0 (TID 63). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 37.0 (TID 61) in 6 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 37.0 (TID 60) in 6 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 37.0 (TID 62) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 37.0 (TID 63) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 37 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 37.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 12 finished: reduce at ContaminationEstimator.scala:115, took 0.015736 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 13 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 40 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 38, ShuffleMapStage 39)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 40 (MapPartitionsRDD[28] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_17 stored as values in memory (estimated size 4.4 KB, free 109.5 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_17_piece0 stored as bytes in memory (estimated size 2.3 KB, free 111.7 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_17_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 17 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 40 (MapPartitionsRDD[28] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 40.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 40.0 (TID 64, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 40.0 (TID 65, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 40.0 (TID 66, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 40.0 (TID 67, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 40.0 (TID 64)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 40.0 (TID 65)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 40.0 (TID 67)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 40.0 (TID 66)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 40.0 (TID 66). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 40.0 (TID 67). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 40.0 (TID 64). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 40.0 (TID 65). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 40.0 (TID 66) in 6 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 40.0 (TID 67) in 5 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 40.0 (TID 65) in 9 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 40.0 (TID 64) in 10 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 40 (reduce at ContaminationEstimator.scala:115) finished in 0.011 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 40.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 13 finished: reduce at ContaminationEstimator.scala:115, took 0.016187 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 14 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 43 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 42, ShuffleMapStage 41)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 43 (MapPartitionsRDD[29] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_18 stored as values in memory (estimated size 4.4 KB, free 116.1 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_18_piece0 stored as bytes in memory (estimated size 2.3 KB, free 118.4 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_18_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 18 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 43 (MapPartitionsRDD[29] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 43.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 43.0 (TID 68, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 43.0 (TID 69, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 43.0 (TID 70, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 43.0 (TID 71, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 43.0 (TID 68)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 43.0 (TID 70)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 43.0 (TID 69)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 43.0 (TID 71)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 43.0 (TID 70). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 43.0 (TID 71). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 43.0 (TID 68). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 43.0 (TID 69). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 43.0 (TID 70) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 43.0 (TID 71) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 43.0 (TID 68) in 6 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 43.0 (TID 69) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 43.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 43 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 14 finished: reduce at ContaminationEstimator.scala:115, took 0.011892 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 15 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 46 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 45, ShuffleMapStage 44)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 46 (MapPartitionsRDD[30] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_19 stored as values in memory (estimated size 4.4 KB, free 122.7 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_19_piece0 stored as bytes in memory (estimated size 2.3 KB, free 125.0 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_19_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 19 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 46 (MapPartitionsRDD[30] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 46.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 46.0 (TID 72, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 46.0 (TID 73, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 46.0 (TID 74, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 46.0 (TID 75, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 46.0 (TID 72)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 46.0 (TID 74)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 46.0 (TID 73)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 46.0 (TID 75)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 46.0 (TID 73). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 46.0 (TID 72). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 46.0 (TID 75). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 46.0 (TID 74). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 46.0 (TID 73) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 46.0 (TID 72) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 46.0 (TID 75) in 4 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 46.0 (TID 74) in 4 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 46 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 46.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 15 finished: reduce at ContaminationEstimator.scala:115, took 0.010537 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 16 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 49 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 48, ShuffleMapStage 47)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 49 (MapPartitionsRDD[31] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_20 stored as values in memory (estimated size 4.4 KB, free 129.4 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_20_piece0 stored as bytes in memory (estimated size 2.3 KB, free 131.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_20_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 20 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 49 (MapPartitionsRDD[31] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 49.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 49.0 (TID 76, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 49.0 (TID 77, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 49.0 (TID 78, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 49.0 (TID 79, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 49.0 (TID 77)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 49.0 (TID 78)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 49.0 (TID 76)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 49.0 (TID 79)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 49.0 (TID 77). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 49.0 (TID 76). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 49.0 (TID 79). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 49.0 (TID 78). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 49.0 (TID 77) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 49.0 (TID 76) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 49.0 (TID 79) in 4 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 49.0 (TID 78) in 5 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 49 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 49.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 16 finished: reduce at ContaminationEstimator.scala:115, took 0.011111 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 17 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 52 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 51, ShuffleMapStage 50)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 52 (MapPartitionsRDD[32] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_21 stored as values in memory (estimated size 4.4 KB, free 136.0 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_21_piece0 stored as bytes in memory (estimated size 2.3 KB, free 138.2 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_21_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 21 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 52 (MapPartitionsRDD[32] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 52.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 52.0 (TID 80, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 52.0 (TID 81, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 52.0 (TID 82, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 52.0 (TID 83, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 52.0 (TID 82)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 52.0 (TID 83)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 52.0 (TID 81)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 52.0 (TID 80)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 52.0 (TID 82). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 52.0 (TID 83). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 52.0 (TID 80). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 52.0 (TID 81). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 52.0 (TID 82) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 52.0 (TID 83) in 6 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 52.0 (TID 80) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 52.0 (TID 81) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 52.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 52 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 17 finished: reduce at ContaminationEstimator.scala:115, took 0.018309 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 18 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 55 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 53, ShuffleMapStage 54)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 55 (MapPartitionsRDD[33] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_22 stored as values in memory (estimated size 4.4 KB, free 142.6 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_22_piece0 stored as bytes in memory (estimated size 2.3 KB, free 144.9 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_22_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 22 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 55 (MapPartitionsRDD[33] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 55.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 55.0 (TID 84, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 55.0 (TID 85, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 55.0 (TID 86, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 55.0 (TID 87, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 55.0 (TID 85)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 55.0 (TID 87)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 55.0 (TID 84)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 55.0 (TID 86)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 55.0 (TID 86). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 55.0 (TID 87). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 55.0 (TID 85). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 55.0 (TID 84). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 55.0 (TID 86) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 55.0 (TID 87) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 55.0 (TID 85) in 5 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 55.0 (TID 84) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 55 (reduce at ContaminationEstimator.scala:115) finished in 0.007 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 55.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 18 finished: reduce at ContaminationEstimator.scala:115, took 0.016087 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 19 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 58 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 56, ShuffleMapStage 57)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 58 (MapPartitionsRDD[34] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_23 stored as values in memory (estimated size 4.4 KB, free 149.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_23_piece0 stored as bytes in memory (estimated size 2.3 KB, free 151.5 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_23_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 23 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 58 (MapPartitionsRDD[34] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 58.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 58.0 (TID 88, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 58.0 (TID 89, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 58.0 (TID 90, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 58.0 (TID 91, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 58.0 (TID 90)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 58.0 (TID 91)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 58.0 (TID 89)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 58.0 (TID 88)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 58.0 (TID 91). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 58.0 (TID 90). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 58.0 (TID 89). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 58.0 (TID 88). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_0_piece0 on localhost:40797 in memory (size: 2.2 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 58.0 (TID 88) in 14 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 58.0 (TID 89) in 14 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 58.0 (TID 90) in 14 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 58.0 (TID 91) in 14 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 58 (reduce at ContaminationEstimator.scala:115) finished in 0.015 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 58.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 19 finished: reduce at ContaminationEstimator.scala:115, took 0.020011 s
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_22_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 228
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_21_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 227
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_20_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 226
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_19_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 225
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_18_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 224
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 20 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 61 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 60, ShuffleMapStage 59)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 61 (MapPartitionsRDD[35] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_17_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 223
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_24 stored as values in memory (estimated size 4.4 KB, free 109.8 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_16_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 222
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_15_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 221
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_24_piece0 stored as bytes in memory (estimated size 2.3 KB, free 98.8 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_24_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 24 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 61 (MapPartitionsRDD[35] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 61.0 with 4 tasks
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_14_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 220
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 61.0 (TID 92, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 61.0 (TID 93, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 61.0 (TID 94, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 61.0 (TID 95, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_13_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 61.0 (TID 93)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 61.0 (TID 94)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 61.0 (TID 92)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 61.0 (TID 95)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 219
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_12_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 207
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned shuffle 0
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 217
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 61.0 (TID 93). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 61.0 (TID 94). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 61.0 (TID 95). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_10_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 216
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 61.0 (TID 92). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 61.0 (TID 95) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 61.0 (TID 94) in 6 ms on localhost (2/4)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_9_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 61.0 (TID 93) in 6 ms on localhost (3/4)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 215
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_8_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 214
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_7_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 213
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_6_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 212
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on localhost:40797 in memory (size: 2.1 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 211
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 61.0 (TID 92) in 9 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 61 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 61.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 20 finished: reduce at ContaminationEstimator.scala:115, took 0.015220 s
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on localhost:40797 in memory (size: 2.2 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 210
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on localhost:40797 in memory (size: 2.1 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 209
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_1_piece0 on localhost:40797 in memory (size: 2.5 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 208
19/03/01 00:53:15 INFO spark.ContextCleaner: Cleaned accumulator 218
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Removed broadcast_11_piece0 on localhost:40797 in memory (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 21 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 64 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 63, ShuffleMapStage 62)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 64 (MapPartitionsRDD[36] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_25 stored as values in memory (estimated size 4.4 KB, free 18.6 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_25_piece0 stored as bytes in memory (estimated size 2.3 KB, free 20.9 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_25_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 25 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 64 (MapPartitionsRDD[36] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 64.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 64.0 (TID 96, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 64.0 (TID 97, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 64.0 (TID 98, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 64.0 (TID 99, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 64.0 (TID 98)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 64.0 (TID 96)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 64.0 (TID 97)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 64.0 (TID 99)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 64.0 (TID 96). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 64.0 (TID 96) in 4 ms on localhost (1/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 64.0 (TID 97). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 64.0 (TID 99). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 64.0 (TID 98). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 64.0 (TID 99) in 7 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 64.0 (TID 97) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 64.0 (TID 98) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 64 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 64.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 21 finished: reduce at ContaminationEstimator.scala:115, took 0.015702 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 22 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 67 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 66, ShuffleMapStage 65)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 67 (MapPartitionsRDD[37] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_26 stored as values in memory (estimated size 4.4 KB, free 25.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_26_piece0 stored as bytes in memory (estimated size 2.3 KB, free 27.5 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_26_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 26 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 67 (MapPartitionsRDD[37] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 67.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 67.0 (TID 100, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 67.0 (TID 101, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 67.0 (TID 102, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 67.0 (TID 103, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 67.0 (TID 102)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 67.0 (TID 103)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 67.0 (TID 101)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 67.0 (TID 100)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 67.0 (TID 101). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 67.0 (TID 102). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 67.0 (TID 100). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 67.0 (TID 103). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 67.0 (TID 101) in 5 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 67.0 (TID 102) in 6 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 67.0 (TID 100) in 8 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 67.0 (TID 103) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 67 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 67.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 22 finished: reduce at ContaminationEstimator.scala:115, took 0.018366 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 23 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 70 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 68, ShuffleMapStage 69)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 70 (MapPartitionsRDD[38] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_27 stored as values in memory (estimated size 4.4 KB, free 31.8 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_27_piece0 stored as bytes in memory (estimated size 2.3 KB, free 34.1 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_27_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 27 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 70 (MapPartitionsRDD[38] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 70.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 70.0 (TID 104, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 70.0 (TID 105, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 70.0 (TID 106, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 70.0 (TID 107, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 70.0 (TID 104)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 70.0 (TID 106)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 70.0 (TID 107)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 70.0 (TID 105)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 70.0 (TID 105). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 70.0 (TID 106). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 70.0 (TID 107). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 70.0 (TID 104). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 70.0 (TID 105) in 7 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 70.0 (TID 106) in 6 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 70.0 (TID 107) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 70.0 (TID 104) in 9 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 70 (reduce at ContaminationEstimator.scala:115) finished in 0.009 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 70.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 23 finished: reduce at ContaminationEstimator.scala:115, took 0.017929 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 24 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 73 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 71, ShuffleMapStage 72)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 73 (MapPartitionsRDD[39] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_28 stored as values in memory (estimated size 4.4 KB, free 38.5 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_28_piece0 stored as bytes in memory (estimated size 2.3 KB, free 40.7 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_28_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 28 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 73 (MapPartitionsRDD[39] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 73.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 73.0 (TID 108, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 73.0 (TID 109, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 73.0 (TID 110, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 73.0 (TID 111, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 73.0 (TID 108)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 73.0 (TID 110)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 73.0 (TID 109)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 73.0 (TID 111)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 73.0 (TID 108). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 73.0 (TID 109). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 73.0 (TID 110). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 73.0 (TID 111). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 73.0 (TID 108) in 3 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 73.0 (TID 109) in 4 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 73.0 (TID 111) in 4 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 73.0 (TID 110) in 4 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 73 (reduce at ContaminationEstimator.scala:115) finished in 0.005 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 73.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 24 finished: reduce at ContaminationEstimator.scala:115, took 0.009398 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 25 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 76 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 74, ShuffleMapStage 75)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 76 (MapPartitionsRDD[40] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_29 stored as values in memory (estimated size 4.4 KB, free 45.1 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_29_piece0 stored as bytes in memory (estimated size 2.3 KB, free 47.3 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_29_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 29 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 76 (MapPartitionsRDD[40] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 76.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 76.0 (TID 112, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 76.0 (TID 113, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 76.0 (TID 114, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 76.0 (TID 115, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 76.0 (TID 112)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 76.0 (TID 114)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 76.0 (TID 113)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 76.0 (TID 115)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 76.0 (TID 114). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 76.0 (TID 113). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 76.0 (TID 112). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 76.0 (TID 115). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 76.0 (TID 114) in 6 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 76.0 (TID 113) in 7 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 76.0 (TID 112) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 76.0 (TID 115) in 7 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 76 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 76.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 25 finished: reduce at ContaminationEstimator.scala:115, took 0.018530 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 26 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 79 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 78, ShuffleMapStage 77)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 79 (MapPartitionsRDD[41] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_30 stored as values in memory (estimated size 4.4 KB, free 51.7 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_30_piece0 stored as bytes in memory (estimated size 2.3 KB, free 54.0 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_30_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 30 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 79 (MapPartitionsRDD[41] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 79.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 79.0 (TID 116, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 79.0 (TID 117, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 79.0 (TID 118, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 79.0 (TID 119, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 79.0 (TID 116)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 79.0 (TID 119)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 79.0 (TID 117)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 79.0 (TID 118)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 79.0 (TID 116). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 79.0 (TID 119). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 79.0 (TID 117). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 79.0 (TID 118). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 79.0 (TID 116) in 7 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 79.0 (TID 119) in 6 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 79.0 (TID 118) in 7 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 79.0 (TID 117) in 8 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 79 (reduce at ContaminationEstimator.scala:115) finished in 0.008 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 79.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 26 finished: reduce at ContaminationEstimator.scala:115, took 0.020488 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 27 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 82 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 81, ShuffleMapStage 80)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 82 (MapPartitionsRDD[42] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_31 stored as values in memory (estimated size 4.4 KB, free 58.3 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_31_piece0 stored as bytes in memory (estimated size 2.3 KB, free 60.6 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_31_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 31 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 82 (MapPartitionsRDD[42] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 82.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 82.0 (TID 120, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 82.0 (TID 121, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 82.0 (TID 122, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 82.0 (TID 123, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 82.0 (TID 120)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 82.0 (TID 122)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 82.0 (TID 121)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 82.0 (TID 123)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 82.0 (TID 120). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 82.0 (TID 122). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 82.0 (TID 121). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 82.0 (TID 123). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 82.0 (TID 120) in 10 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 82.0 (TID 122) in 9 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 82.0 (TID 121) in 9 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 82.0 (TID 123) in 8 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 82 (reduce at ContaminationEstimator.scala:115) finished in 0.010 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 82.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 27 finished: reduce at ContaminationEstimator.scala:115, took 0.019871 s
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: reduce at ContaminationEstimator.scala:115
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 28 (reduce at ContaminationEstimator.scala:115) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 85 (reduce at ContaminationEstimator.scala:115)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 84, ShuffleMapStage 83)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 85 (MapPartitionsRDD[43] at map at ContaminationEstimator.scala:114), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_32 stored as values in memory (estimated size 4.4 KB, free 64.9 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_32_piece0 stored as bytes in memory (estimated size 2.3 KB, free 67.2 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_32_piece0 in memory on localhost:40797 (size: 2.3 KB, free: 521.2 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 32 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 85 (MapPartitionsRDD[43] at map at ContaminationEstimator.scala:114)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 85.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 85.0 (TID 124, localhost, partition 0,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 85.0 (TID 125, localhost, partition 1,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 85.0 (TID 126, localhost, partition 2,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 85.0 (TID 127, localhost, partition 3,PROCESS_LOCAL, 1967 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 85.0 (TID 124)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 85.0 (TID 125)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 85.0 (TID 127)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 85.0 (TID 126)
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_0 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_1 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_2 locally
19/03/01 00:53:15 INFO storage.BlockManager: Found block rdd_16_3 locally
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 85.0 (TID 124). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 85.0 (TID 125). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 85.0 (TID 127). 2058 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 85.0 (TID 124) in 7 ms on localhost (1/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 85.0 (TID 126). 2066 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 85.0 (TID 125) in 9 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 85.0 (TID 127) in 8 ms on localhost (3/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 85.0 (TID 126) in 10 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ResultStage 85 (reduce at ContaminationEstimator.scala:115) finished in 0.011 s
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 85.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Job 28 finished: reduce at ContaminationEstimator.scala:115, took 0.018725 s
19/03/01 00:53:15 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/03/01 00:53:15 INFO storage.MemoryStore: MemoryStore cleared
19/03/01 00:53:15 INFO storage.BlockManager: BlockManager stopped
19/03/01 00:53:15 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/03/01 00:53:15 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/03/01 00:53:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/03/01 00:53:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/03/01 00:53:15 INFO spark.SparkContext: Successfully stopped SparkContext
- estimate contamination from a read dataset with 10% contamination reads
19/03/01 00:53:15 INFO spark.SparkContext: Running Spark version 1.6.1
19/03/01 00:53:15 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/03/01 00:53:15 INFO spark.SecurityManager: Changing view acls to: jenkins
19/03/01 00:53:15 INFO spark.SecurityManager: Changing modify acls to: jenkins
19/03/01 00:53:15 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(jenkins); users with modify permissions: Set(jenkins)
19/03/01 00:53:15 INFO util.Utils: Successfully started service 'sparkDriver' on port 54090.
19/03/01 00:53:15 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/03/01 00:53:15 INFO Remoting: Starting remoting
19/03/01 00:53:15 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem@localhost:54091]
19/03/01 00:53:15 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 54091.
19/03/01 00:53:15 INFO spark.SparkEnv: Registering MapOutputTracker
19/03/01 00:53:15 INFO spark.SparkEnv: Registering BlockManagerMaster
19/03/01 00:53:15 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-c9a25d04-e558-45cd-96fd-70744149c276
19/03/01 00:53:15 INFO storage.MemoryStore: MemoryStore started with capacity 521.6 MB
19/03/01 00:53:15 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/03/01 00:53:15 INFO executor.Executor: Starting executor ID driver on host localhost
19/03/01 00:53:15 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 43070.
19/03/01 00:53:15 INFO netty.NettyBlockTransferService: Server created on 43070
19/03/01 00:53:15 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/03/01 00:53:15 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:43070 with 521.6 MB RAM, BlockManagerId(driver, localhost, 43070)
19/03/01 00:53:15 INFO storage.BlockManagerMaster: Registered BlockManager
19/03/01 00:53:15 INFO spark.SparkContext: Starting job: collect at BroadcastRegionJoin.scala:100
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Registering RDD 6 (keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Got job 0 (collect at BroadcastRegionJoin.scala:100) with 4 output partitions
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Final stage: ResultStage 1 (collect at BroadcastRegionJoin.scala:100)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage 0)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Missing parents: List(ShuffleMapStage 0)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 4.1 KB, free 4.1 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 2.2 KB, free 6.3 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on localhost:43070 (size: 2.2 KB, free: 521.6 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ShuffleMapStage 0 (MapPartitionsRDD[6] at keyBy at BroadcastRegionJoin.scala:98)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 4 tasks
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 1.0 in stage 0.0 (TID 1, localhost, partition 1,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 2.0 in stage 0.0 (TID 2, localhost, partition 2,PROCESS_LOCAL, 2082 bytes)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Starting task 3.0 in stage 0.0 (TID 3, localhost, partition 3,PROCESS_LOCAL, 2128 bytes)
19/03/01 00:53:15 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
19/03/01 00:53:15 INFO executor.Executor: Running task 1.0 in stage 0.0 (TID 1)
19/03/01 00:53:15 INFO executor.Executor: Running task 2.0 in stage 0.0 (TID 2)
19/03/01 00:53:15 INFO executor.Executor: Running task 3.0 in stage 0.0 (TID 3)
19/03/01 00:53:15 INFO executor.Executor: Finished task 2.0 in stage 0.0 (TID 2). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO executor.Executor: Finished task 1.0 in stage 0.0 (TID 1). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 2.0 in stage 0.0 (TID 2) in 11 ms on localhost (1/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 15 ms on localhost (2/4)
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 1.0 in stage 0.0 (TID 1) in 13 ms on localhost (3/4)
19/03/01 00:53:15 INFO executor.Executor: Finished task 3.0 in stage 0.0 (TID 3). 1090 bytes result sent to driver
19/03/01 00:53:15 INFO scheduler.TaskSetManager: Finished task 3.0 in stage 0.0 (TID 3) in 15 ms on localhost (4/4)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool 
19/03/01 00:53:15 INFO scheduler.DAGScheduler: ShuffleMapStage 0 (keyBy at BroadcastRegionJoin.scala:98) finished in 0.019 s
19/03/01 00:53:15 INFO scheduler.DAGScheduler: looking for newly runnable stages
19/03/01 00:53:15 INFO scheduler.DAGScheduler: running: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 1)
19/03/01 00:53:15 INFO scheduler.DAGScheduler: failed: Set()
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99), which has no missing parents
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_1 stored as values in memory (estimated size 4.9 KB, free 11.2 KB)
19/03/01 00:53:15 INFO storage.MemoryStore: Block broadcast_1_piece0 stored as bytes in memory (estimated size 2.5 KB, free 13.7 KB)
19/03/01 00:53:15 INFO storage.BlockManagerInfo: Added broadcast_1_piece0 in memory on localhost:43070 (size: 2.5 KB, free: 521.6 MB)
19/03/01 00:53:15 INFO spark.SparkContext: Created broadcast 1 from broadcast at DAGScheduler.scala:1006
19/03/01 00:53:15 INFO scheduler.DAGScheduler: Submitting 4 missing tasks from ResultStage 1 (ShuffledRDD[7] at groupByKey at BroadcastRegionJoin.scala:99)
19/03/01 00:53:15 INFO scheduler.TaskSchedulerImpl: Adding task set 1.0 with 4 tasks