Test Result : FragmentDatasetSuite

0 failures (±0)
26 tests (±0)
Took 22 sec.

All Tests

Test nameDurationStatus
bin quality scores in fragments0.59 secPassed
dataset and rdd conversion to alignments are equivalent0.72 secPassed
don't lose any reads when piping interleaved fastq to sam0.64 secPassed
don't lose any reads when piping tab5 to sam0.26 secPassed
don't lose any reads when piping tab6 to sam0.26 secPassed
interleaved paired read names with index sequences in read names as fragments0.22 secPassed
interleaved paired read names with index sequences in read names can group into fragments0.35 secPassed
load parquet to sql, save, re-read from avro2.5 secPassed
paired read names with index sequences in read names can group into fragments0.45 secPassed
transform dataset via java API0.63 secPassed
transform fragments to coverage genomic dataset0.9 secPassed
transform fragments to feature genomic dataset0.88 secPassed
transform fragments to genotype genomic dataset1.6 secPassed
transform fragments to read genomic dataset0.99 secPassed
transform fragments to slice genomic dataset1.2 secPassed
transform fragments to variant context genomic dataset0.24 secPassed
transform fragments to variant genomic dataset1.3 secPassed
union two genomic datasets of fragments together0.58 secPassed
use broadcast join to pull down fragments mapped to targets0.47 secPassed
use full outer shuffle join to pull down fragments mapped to targets1.1 secPassed
use left outer shuffle join to pull down fragments mapped to targets1.1 secPassed
use right outer broadcast join to pull down fragments mapped to targets0.44 secPassed
use right outer shuffle join to pull down fragments mapped to targets1.1 secPassed
use right outer shuffle join with group by to pull down fragments mapped to targets1.1 secPassed
use shuffle join to pull down fragments mapped to targets1.4 secPassed
use shuffle join with group by to pull down fragments mapped to targets1.1 secPassed