test parseReadInFastq, no read quality | 0 ms | Passed |
test parseReadInFastq, read metadata removal | 1 ms | Passed |
test parseReadInFastq, read quality longer than read length | 1 ms | Passed |
test parseReadInFastq, read quality shorter than read length, padded with B | 0 ms | Passed |
test parseReadInFastq, read suffix removal | 1 ms | Passed |
test read name suffix and index of pair must match | 3 ms | Passed |
testing FastqRecordConverter.convertFragment with another valid input having /1, /2 suffixes | 0 ms | Passed |
testing FastqRecordConverter.convertFragment with invalid input: different read names | 1 ms | Passed |
testing FastqRecordConverter.convertFragment with valid input | 0 ms | Passed |
testing FastqRecordConverter.convertPair with 7-line invalid input | 1 ms | Passed |
testing FastqRecordConverter.convertPair with invalid input: first read length and qual don't match | 0 ms | Passed |
testing FastqRecordConverter.convertPair with invalid input: second read length and qual don't match | 1 ms | Passed |
testing FastqRecordConverter.convertPair with valid input | 2 ms | Passed |
testing FastqRecordConverter.convertRead with valid input | 0 ms | Passed |
testing FastqRecordConverter.convertRead with valid input, no qual, not strict | 0 ms | Passed |
testing FastqRecordConverter.convertRead with valid input, no qual, strict | 0 ms | Passed |
testing FastqRecordConverter.convertRead with valid input: setFirstOfPair and setSecondOfPair both true | 0 ms | Passed |
testing FastqRecordConverter.convertRead with valid input: setFirstOfPair set to true | 0 ms | Passed |
testing FastqRecordConverter.convertRead with valid input: setSecondOfPair set to true | 0 ms | Passed |