Build #211

Environment variables

NameValue
ANDROID_HOME/home/android-sdk/
BUILD_CAUSEUPSTREAMTRIGGER
BUILD_CAUSE_UPSTREAMTRIGGERtrue
BUILD_DISPLAY_NAME#211
BUILD_ID211
BUILD_NUMBER211
CLASSPATH$CLASSPATH
EXECUTOR_NUMBER9
GIT_BRANCHissues/263-merge-and-annotate
HADOOP_VERSION2.3.0
HOME/home/jenkins
HUDSON_HOME/var/lib/jenkins
HUDSON_SERVER_COOKIE472906e9832aeb79
HUDSON_URLhttps://amplab.cs.berkeley.edu/jenkins/
JENKINS_HOME/var/lib/jenkins
JENKINS_SERVER_COOKIE472906e9832aeb79
JENKINS_URLhttps://amplab.cs.berkeley.edu/jenkins/
LOGNAMEjenkins
MAIL/var/mail/jenkins
NLSPATH/usr/dt/lib/nls/msg/%L/%N.cat
NODE_LABELSamp-jenkins-worker-04 centos spark-test
NODE_NAMEamp-jenkins-worker-04
OLDPWD/home/jenkins
PATH/home/jenkins/.cargo/bin:/home/anaconda/bin:/home/jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1/bin/:/home/android-sdk/:/usr/local/bin:/bin:/usr/bin
PWD/home/jenkins
ROOT_BUILD_CAUSEGHPRBCAUSE
ROOT_BUILD_CAUSE_GHPRBCAUSEtrue
SCALAVER2.11
SHELL/bin/bash
SHLVL1
SPARK_TESTING1
SPARK_VERSION2.0.0
SSH_CLIENT192.168.10.10 54870 22
SSH_CONNECTION192.168.10.10 54870 192.168.10.24 22
USERjenkins
XFILESEARCHPATH/usr/dt/app-defaults/%L/Dt
_/usr/bin/java
ghprbActualCommit71f0e3e20a56ebb549470159cb4a98047089f566
ghprbActualCommitAuthorFrank Austin Nothaft
ghprbActualCommitAuthorEmailfnothaft@alumni.stanford.edu
ghprbPullAuthorEmailfnothaft@berkeley.edu
ghprbPullDescriptionGitHub pull request #266 of commit 71f0e3e20a56ebb549470159cb4a98047089f566 automatically merged.
ghprbPullId266
ghprbPullLinkhttps://api.github.com/repos/bigdatagenomics/avocado/pulls/266
ghprbPullTitle[AVOCADO-253] Add joint variant caller, direct save to VCF.
ghprbSourceBranchissues/263-merge-and-annotate
ghprbTargetBranchmaster
labelcentos
sha1origin/pr/266/merge