Build #211

Environment variables

NameValue
ANDROID_HOME/home/android-sdk/
BUILD_CAUSEGHPRBCAUSE
BUILD_CAUSE_GHPRBCAUSEtrue
BUILD_DISPLAY_NAME#211
BUILD_ID211
BUILD_NUMBER211
BUILD_TAGjenkins-avocado-prb-211
BUILD_URLhttps://amplab.cs.berkeley.edu/jenkins/job/avocado-prb/211/
CLASSPATH$CLASSPATH
EXECUTOR_NUMBER-1
GIT_BRANCHissues/263-merge-and-annotate
GOPATH/home/jenkins/go-projects
GOROOT/usr/local/go
HOME/home/jenkins
HUDSON_HOME/var/lib/jenkins
HUDSON_SERVER_COOKIE472906e9832aeb79
HUDSON_URLhttps://amplab.cs.berkeley.edu/jenkins/
JAVA_HOME/usr/lib/jvm/java-8-oracle
JENKINS_HOME/var/lib/jenkins
JENKINS_SERVER_COOKIE472906e9832aeb79
JENKINS_URLhttps://amplab.cs.berkeley.edu/jenkins/
JOB_NAMEavocado-prb
JOB_URLhttps://amplab.cs.berkeley.edu/jenkins/job/avocado-prb/
LANGen_US.UTF-8
LOGNAMEjenkins
MAIL/var/mail/jenkins
NLSPATH/usr/dt/lib/nls/msg/%L/%N.cat
NODE_LABELSamp-jenkins-staging-worker-02 staging staging-02 ubuntu
NODE_NAMEamp-jenkins-staging-worker-02
OLDPWD/home/jenkins
PATH/usr/local/go/bin:/home/jenkins/go-projects/bin:/home/jenkins/anaconda2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
PWD/home/jenkins
ROOT_BUILD_CAUSEGHPRBCAUSE
ROOT_BUILD_CAUSE_GHPRBCAUSEtrue
RUN_DISPLAY_URLhttps://amplab.cs.berkeley.edu/jenkins/job/avocado-prb/211/display/redirect
SHELL/bin/sh
SPARK_TESTING1
SSH_CLIENT192.168.10.10 35076 22
SSH_CONNECTION192.168.10.10 35076 192.168.10.32 22
USERjenkins
XDG_RUNTIME_DIR/run/user/17938
XDG_SESSION_ID1
XFILESEARCHPATH/usr/dt/app-defaults/%L/Dt
ghprbActualCommit71f0e3e20a56ebb549470159cb4a98047089f566
ghprbActualCommitAuthorFrank Austin Nothaft
ghprbActualCommitAuthorEmailfnothaft@alumni.stanford.edu
ghprbPullAuthorEmailfnothaft@berkeley.edu
ghprbPullDescriptionGitHub pull request #266 of commit 71f0e3e20a56ebb549470159cb4a98047089f566 automatically merged.
ghprbPullId266
ghprbPullLinkhttps://api.github.com/repos/bigdatagenomics/avocado/pulls/266
ghprbPullTitle[AVOCADO-253] Add joint variant caller, direct save to VCF.
ghprbSourceBranchissues/263-merge-and-annotate
ghprbTargetBranchmaster
sha1origin/pr/266/merge