Test Result

10 failures (+10) , 1 skipped (+1)
277 tests (+153)
Took 17 min.

All Failed Tests

Test NameDurationAge
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.discover and call short indel1 min 15 sec1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call hom alt GA->CC mnp at 1/889158–90.1 sec1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call hom alt C->CCCCT insertion at 1/8665110.11 sec1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call het ATG->A deletion at 1/90513054 ms1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call het ATG->A deletion at 1/905130 while scoring all sites65 ms1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call het AG->A deletion at 1/90717059 ms1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call het T->G snp at 1/24089884 ms1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call hom alt T->TAAA insertion at 1/412018557 ms1
 org.bdgenomics.avocado.genotyping.BiallelicGenotyperSuite.call het alt TTATA,TTA->T insertion at 1/527454797 ms1
 org.bdgenomics.avocado.genotyping.SquareOffReferenceModelSuite.extract variants finds sites with a called alt59 ms1

All Tests

PackageDurationFail(diff)Skip(diff)Pass(diff)Total(diff)
org.bdgenomics.avocado.genotyping17 min10+101+175+5686+67
org.bdgenomics.avocado.models11 ms0042+4242+42
org.bdgenomics.avocado.realigner0.62 sec0071+1771+17
org.bdgenomics.avocado.util6.5 sec0078+2778+27