Test Result : RealignerSuite

1 failures
15 tests
Took 0.98 sec.

All Tests

Test nameDurationStatus
align sequence with a complex deletion1 msPassed
one sample read should fail due to a repeat, all others should realign0.17 secFailed
read is a realignment candidate if there is at least one non-canonical block1 msPassed
read is not a realignment candidate if it is canonical1 msPassed
read is not a realignment candidate if it is canonical and clipped0 msPassed
realign a mnp expressed as a complex indel3 msPassed
realign a read with a complex deletion2 msPassed
realign a read with a snp and deletion separated by a flank1 msPassed
realign a set of reads around a deletion0.27 secPassed
realign a set of reads around an insert0.24 secPassed
realign an indel that is not left normalized22 msPassed
realign two snps expressed as a complex indel2 msPassed
realigning a read with a repeat will return the original read0.25 secPassed
realigning a repetative read will fire an assert1 msPassed
realignment candidate code needs at least one block0 msPassed