AbortedConsole Output

Started by an SCM change
[EnvInject] - Loading node environment variables.
Building remotely on research-jenkins-worker-09 (ubuntu ubuntu-gpu research-09 ubuntu-avx2) in workspace /home/jenkins/workspace/e-mission-server
[WS-CLEANUP] Deleting project workspace...
Cloning the remote Git repository
Cloning repository https://github.com/e-mission/e-mission-server
 > git init /home/jenkins/workspace/e-mission-server # timeout=10
Fetching upstream changes from https://github.com/e-mission/e-mission-server
 > git --version # timeout=10
 > git fetch --tags --progress https://github.com/e-mission/e-mission-server +refs/heads/*:refs/remotes/origin/*
 > git config remote.origin.url https://github.com/e-mission/e-mission-server # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/e-mission/e-mission-server # timeout=10
Fetching upstream changes from https://github.com/e-mission/e-mission-server
 > git fetch --tags --progress https://github.com/e-mission/e-mission-server +refs/heads/*:refs/remotes/origin/*
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision 8747e2279393f05f86e6be58f94de77909a4d455 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 8747e2279393f05f86e6be58f94de77909a4d455
 > git rev-list 6ad8fdfbfca406baef99c0b0b11a8d91f5c04c24 # timeout=10
[e-mission-server] $ /bin/bash /tmp/hudson3977956323388323867.sh
Deploying environment in /tmp/tmp.8bNefs7HVu
Make sure you are running this with conda >=4.2
Check with 'conda -V'
Upgrade with 'conda update conda' from the *root* environment
Using Anaconda API: https://api.anaconda.org
Fetching package metadata .............
Solving package specifications: .
Collecting jwcrypto==0.4.2
  Using cached https://files.pythonhosted.org/packages/08/58/39cd800f07535025a01a3b85839a11b51f42ef4ea7380dd513f9046b779c/jwcrypto-0.4.2-py2.py3-none-any.whl
Collecting pyfcm==1.4.3
Collecting pygeocoder==1.2.5
Collecting pykml==0.1.3
Collecting pymongo==3.5.1
  Using cached https://files.pythonhosted.org/packages/10/b3/2a3dd782a8bc51d6a715ed1db8d1851271ab454a8da67c462f7ecab16356/pymongo-3.5.1-cp36-cp36m-manylinux1_x86_64.whl
Collecting cryptography>=1.5 (from jwcrypto==0.4.2)
  Using cached https://files.pythonhosted.org/packages/45/73/d18a8884de8bffdcda475728008b5b13be7fbef40a2acc81a0d5d524175d/cryptography-2.8-cp34-abi3-manylinux1_x86_64.whl
Collecting requests-toolbelt (from pyfcm==1.4.3)
  Using cached https://files.pythonhosted.org/packages/60/ef/7681134338fc097acef8d9b2f8abe0458e4d87559c689a8c306d0957ece5/requests_toolbelt-0.9.1-py2.py3-none-any.whl
Requirement already satisfied: requests in /tmp/tmp.8bNefs7HVu/lib/python3.6/site-packages (from pyfcm==1.4.3)
Collecting lxml>=2.2.6 (from pykml==0.1.3)
  Cache entry deserialization failed, entry ignored
  Using cached https://files.pythonhosted.org/packages/ec/be/5ab8abdd8663c0386ec2dd595a5bc0e23330a0549b8a91e32f38c20845b6/lxml-4.4.1-cp36-cp36m-manylinux1_x86_64.whl
Requirement already satisfied: six>=1.4.1 in /tmp/tmp.8bNefs7HVu/lib/python3.6/site-packages (from cryptography>=1.5->jwcrypto==0.4.2)
Collecting cffi!=1.11.3,>=1.8 (from cryptography>=1.5->jwcrypto==0.4.2)
  Using cached https://files.pythonhosted.org/packages/ab/15/d6bd2c322da944ba74ca545dd5e4af6e1e72339cbbc738e6877e349cdfbe/cffi-1.13.1-cp36-cp36m-manylinux1_x86_64.whl
Collecting pycparser (from cffi!=1.11.3,>=1.8->cryptography>=1.5->jwcrypto==0.4.2)
Installing collected packages: pycparser, cffi, cryptography, jwcrypto, requests-toolbelt, pyfcm, pygeocoder, lxml, pykml, pymongo
Successfully installed cffi-1.13.1 cryptography-2.8 jwcrypto-0.4.2 lxml-4.4.1 pycparser-2.19 pyfcm-1.4.3 pygeocoder-1.2.5 pykml-0.1.3 pymongo-3.5.1 requests-toolbelt-0.9.1
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#
# To activate this environment, use:
# > source activate /tmp/tmp.8bNefs7HVu
#
# To deactivate an active environment, use:
# > source deactivate
#

Traceback (most recent call last):
  File "bin/deploy/push_conf.py", line 12, in <module>
    data = json.loads(f.read())
  File "/tmp/tmp.8bNefs7HVu/lib/python3.6/json/__init__.py", line 354, in loads
    return _default_decoder.decode(s)
  File "/tmp/tmp.8bNefs7HVu/lib/python3.6/json/decoder.py", line 339, in decode
    obj, end = self.raw_decode(s, idx=_w(s, 0).end())
  File "/tmp/tmp.8bNefs7HVu/lib/python3.6/json/decoder.py", line 355, in raw_decode
    obj, end = self.scan_once(s, idx)
json.decoder.JSONDecodeError: Expecting ',' delimiter: line 4 column 5 (char 87)
EEEEEEEE/home/jenkins/workspace/e-mission-server/emission/analysis/config.py:18: ResourceWarning: unclosed file <_io.TextIOWrapper name='conf/analysis/debug.conf.json' mode='r' encoding='UTF-8'>
  config_data = get_config_data()
/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:347: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-08-05.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open(dataFile+".ground_truth"), object_hook=bju.object_hook)
EEEEEEEE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:495: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-08-910.ground_truth' mode='r' encoding='UTF-8'>
  object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:573: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-08-910.ground_truth' mode='r' encoding='UTF-8'>
  object_hook=bju.object_hook)
EEEE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:535: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/iphone_2016-02-22.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open(dataFile+".ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:638: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/iphone_2016-02-22.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open(dataFile+".ground_truth"), object_hook=bju.object_hook)
EEEE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:374: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/gabe_2016-06-15.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open(dataFile+".ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:431: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2015-08-23.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_2015-08-23.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:476: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/sunil_2016-07-20.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/sunil_2016-07-20.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:792: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/another_speed_assertion_failure.jan-16.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/another_speed_assertion_failure.jan-16.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:611: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-07-22.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth_1 = json.load(open(dataFile_1+".ground_truth"), object_hook=bju.object_hook)
/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:612: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-07-25.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth_2 = json.load(open(dataFile_2+".ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:388: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-independence_day.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_2016-independence_day.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:416: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-independence_day.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_2016-independence_day.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:402: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-independence_day.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_2016-independence_day.ground_truth"), object_hook=bju.object_hook)
EEEEEE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:676: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/issue_436_assertion_error.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open(dataFile+".ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:778: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/test_overriden_mode_hack.jul-31.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/test_overriden_mode_hack.jul-31.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:446: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2015-07-22.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_2015-07-22.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:361: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/sunil_2016-07-27.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open(dataFile+".ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:764: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_single_positional_indexer.dec-12.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_single_positional_indexer.dec-12.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:461: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-09-03.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth = json.load(open("emission/tests/data/real_examples/shankari_2016-09-03.ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:740: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-01-12.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth_1 = json.load(open(dataFile_1+".ground_truth"), object_hook=bju.object_hook)
/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:741: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-01-13.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth_2 = json.load(open(dataFile_2+".ground_truth"), object_hook=bju.object_hook)
EE/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:714: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-01-12.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth_1 = json.load(open(dataFile_1+".ground_truth"), object_hook=bju.object_hook)
/home/jenkins/workspace/e-mission-server/emission/tests/analysisTests/intakeTests/TestPipelineRealData.py:715: ResourceWarning: unclosed file <_io.TextIOWrapper name='emission/tests/data/real_examples/shankari_2016-01-13.ground_truth' mode='r' encoding='UTF-8'>
  ground_truth_2 = json.load(open(dataFile_2+".ground_truth"), object_hook=bju.object_hook)
EEEE.........EEEEEEEEEEEBuild timed out (after 45 minutes). Marking the build as aborted.
Build was aborted
Finished: ABORTED