Changes

Summary

  1. Update default container images. (commit: 6a40d7b) (details)
  2. Update cannoli-shell example per ADAM 0.34.0 release. (commit: bc727c4) (details)
  3. Update default container images for bcftools and samtools to 1.12. (commit: 211e500) (details)
  4. Bump guava from 27.0.1-jre to 29.0-jre (commit: 3d318f8) (details)
Commit 6a40d7b3c4b3b763339ff2c863fd1817db0557ac by heuermh
Update default container images.
(commit: 6a40d7b)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/Freebayes.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/Vep.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/Star.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/BedtoolsIntersect.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/BwaMem2.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/Gem.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/SingleEndStar.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/Blastn.scala (diff)
Commit bc727c4793095f14aa6a900f57c20fd3b7f94417 by heuermh
Update cannoli-shell example per ADAM 0.34.0 release.
(commit: bc727c4)
The file was modifiedREADME.md (diff)
Commit 211e500289ff9ec1f6fe07f7f56c4857406df505 by heuermh
Update default container images for bcftools and samtools to 1.12.
(commit: 211e500)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/BcftoolsMpileup.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/SamtoolsMpileup.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/BcftoolsCall.scala (diff)
The file was modifiedcore/src/main/scala/org/bdgenomics/cannoli/BcftoolsNorm.scala (diff)
Commit 3d318f8edf41f60d9f91b48ec84a879e64b3dd2a by noreply
Bump guava from 27.0.1-jre to 29.0-jre

Bumps [guava](https://github.com/google/guava) from 27.0.1-jre to 29.0-jre.
- [Release notes](https://github.com/google/guava/releases)
- [Commits](https://github.com/google/guava/commits)

Signed-off-by: dependabot[bot] <support@github.com>
(commit: 3d318f8)
The file was modifiedpom.xml (diff)