SuccessConsole Output

Started by upstream project "PacMin-prb" build number 16
originally caused by:
 GitHub pull request #18 of commit d761d5f12ad5db4eff805eee78c86a4c4e3f3c5d automatically merged.
[EnvInject] - Loading node environment variables.
Building remotely on amp-jenkins-slave-02 (centos) in workspace /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos
Cloning the remote Git repository
Cloning repository https://github.com/bigdatagenomics/pacmin.git
 > git init /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos # timeout=10
Fetching upstream changes from https://github.com/bigdatagenomics/pacmin.git
 > git --version # timeout=10
 > git fetch --tags --progress https://github.com/bigdatagenomics/pacmin.git +refs/heads/*:refs/remotes/origin/*
 > git config remote.origin.url https://github.com/bigdatagenomics/pacmin.git # timeout=10
 > git config remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/bigdatagenomics/pacmin.git # timeout=10
Fetching upstream changes from https://github.com/bigdatagenomics/pacmin.git
 > git fetch --tags --progress https://github.com/bigdatagenomics/pacmin.git +refs/pull/*:refs/remotes/origin/pr/*
Checking out Revision deaf7a6ead9649e18c36a827d71c004b6fb250b6 (detached)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f deaf7a6ead9649e18c36a827d71c004b6fb250b6
 > git rev-list b6447831e853032d74da87fd828aca5b0e0a19fe # timeout=10
First time build. Skipping changelog.
[centos] $ /home/jenkins/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.1.1/bin/mvn -DghprbTriggerAuthorEmail= -DghprbTargetBranch=master -DghprbSourceBranch=fix-build-031015 -Dhadoop.version=2.2.0 "-DghprbActualCommitAuthor=Frank Austin Nothaft" -Dlabel=centos -Dsha1=origin/pr/18/merge -DghprbPullLink=https://github.com/bigdatagenomics/PacMin/pull/18 -DghprbActualCommit=d761d5f12ad5db4eff805eee78c86a4c4e3f3c5d -DGIT_BRANCH=fix-build-031015 -DghprbPullAuthorEmail=fnothaft@berkeley.edu -DghprbActualCommitAuthorEmail=fnothaft@alumni.stanford.edu -DghprbTriggerAuthor= -DghprbPullId=18 "-DghprbPullTitle=[PacMin-18] Fixed broken build." "-DghprbPullDescription=GitHub pull request #18 of commit d761d5f12ad5db4eff805eee78c86a4c4e3f3c5d automatically merged." clean package
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.pacmin:pacmin-core:jar:0.0.1-SNAPSHOT
[WARNING] 'dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 108, column 23
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.pacmin:pacmin-parent:0.0.1-SNAPSHOT, /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pom.xml, line 334, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.pacmin:pacmin-parent:0.0.1-SNAPSHOT, /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pom.xml, line 338, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.pacmin:pacmin-parent:0.0.1-SNAPSHOT, /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pom.xml, line 342, column 25
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.pacmin:pacmin-cli:jar:0.0.1-SNAPSHOT
[WARNING] 'dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 131, column 23
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.pacmin:pacmin-parent:0.0.1-SNAPSHOT, /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pom.xml, line 334, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.pacmin:pacmin-parent:0.0.1-SNAPSHOT, /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pom.xml, line 338, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ org.bdgenomics.pacmin:pacmin-parent:0.0.1-SNAPSHOT, /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pom.xml, line 342, column 25
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.bdgenomics.pacmin:pacmin-parent:pom:0.0.1-SNAPSHOT
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 334, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 338, column 25
[WARNING] 'dependencyManagement.dependencies.dependency.exclusions.exclusion.artifactId' for org.apache.hadoop:hadoop-client:jar with value '*' does not match a valid id pattern. @ line 342, column 25
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Build Order:
[INFO] 
[INFO] PacMin
[INFO] pacmin-core: Core assembler algorithms
[INFO] pacmin-cli: Command line interface for PacBio assembler
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building PacMin 0.0.1-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ pacmin-parent ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ pacmin-parent ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ pacmin-parent ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ pacmin-parent ---
[INFO] Modified 0 of 12 .scala files
[INFO] 
[INFO] --- scala-maven-plugin:3.1.5:compile (scala-compile-first) @ pacmin-parent ---
[INFO] No sources to compile
[INFO] 
[INFO] --- scala-maven-plugin:3.1.5:testCompile (scala-test-compile-first) @ pacmin-parent ---
[INFO] No sources to compile
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building pacmin-core: Core assembler algorithms 0.0.1-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ pacmin-core ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ pacmin-core ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ pacmin-core ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ pacmin-core ---
[INFO] Modified 0 of 11 .scala files
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ pacmin-core ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-core/src/main/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.1.5:compile (scala-compile-first) @ pacmin-core ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.3
[WARNING]  org.bdgenomics.bdg-utils:bdg-utils-metrics:0.1.1 requires scala version: 2.10.4
[WARNING] Multiple versions of scala libraries detected!
[INFO] Using zinc server for incremental compilation
[info] Compiling 8 Scala sources to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-core/target/scala-2.10.3/classes...
[info] Compile success at Mar 11, 2015 11:26:30 PM [6.417s]
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ pacmin-core ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ pacmin-core ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-core/src/test/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.1.5:testCompile (scala-test-compile-first) @ pacmin-core ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.3
[WARNING]  org.bdgenomics.bdg-utils:bdg-utils-metrics:0.1.1 requires scala version: 2.10.4
[WARNING] Multiple versions of scala libraries detected!
[INFO] Using zinc server for incremental compilation
[info] Compiling 3 Scala sources to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-core/target/scala-2.10.3/test-classes...
[info] Compile success at Mar 11, 2015 11:26:35 PM [4.415s]
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ pacmin-core ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-surefire-plugin:2.7:test (default-test) @ pacmin-core ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- scalatest-maven-plugin:1.0-RC2:test (test) @ pacmin-core ---
Run starting. Expected test count is: 8
DiscoverySuite:
OverlapperSuite:
- compute overlap between two strings from the same strand
- only test two reads if they meet ordering restrictions
- compute overlap between two strings from different strands
2015-03-11 23:26:40 WARN  NativeCodeLoader:62 - Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
2015-03-11 23:26:40 ERROR MetricsSystem:96 - Sink class org.apache.spark.metrics.sink.MetricsServlet cannot be instantialized
java.lang.reflect.InvocationTargetException
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:173)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:167)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:226)
	at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:39)
	at scala.collection.mutable.HashMap.foreach(HashMap.scala:98)
	at org.apache.spark.metrics.MetricsSystem.registerSinks(MetricsSystem.scala:167)
	at org.apache.spark.metrics.MetricsSystem.start(MetricsSystem.scala:89)
	at org.apache.spark.SparkContext.<init>(SparkContext.scala:346)
	at org.bdgenomics.utils.misc.SparkFunSuite$class.setupSparkContext(SparkFunSuite.scala:51)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.setupSparkContext(OverlapperSuite.scala:26)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply$mcV$sp(SparkFunSuite.scala:94)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:129)
	at org.scalatest.Suite$class.withFixture(Suite.scala:1974)
	at org.scalatest.FunSuite.withFixture(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:126)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.SuperEngine.runTestImpl(Engine.scala:198)
	at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:135)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.org$scalatest$BeforeAndAfter$$super$runTest(OverlapperSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.runTest(BeforeAndAfter.scala:171)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.runTest(OverlapperSuite.scala:26)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:260)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:249)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.SuperEngine.org$scalatest$SuperEngine$$runTestsInBranch(Engine.scala:249)
	at org.scalatest.SuperEngine.runTestsImpl(Engine.scala:326)
	at org.scalatest.FunSuiteLike$class.runTests(FunSuiteLike.scala:168)
	at org.scalatest.FunSuite.runTests(FunSuite.scala:1182)
	at org.scalatest.Suite$class.run(Suite.scala:2303)
	at org.scalatest.FunSuite.org$scalatest$FunSuiteLike$$super$run(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.SuperEngine.runImpl(Engine.scala:362)
	at org.scalatest.FunSuiteLike$class.run(FunSuiteLike.scala:174)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.org$scalatest$BeforeAndAfter$$super$run(OverlapperSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.run(BeforeAndAfter.scala:208)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.run(OverlapperSuite.scala:26)
	at org.scalatest.Suite$class.callExecuteOnSuite$1(Suite.scala:2403)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2433)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2431)
	at scala.collection.immutable.Range.foreach(Range.scala:141)
	at org.scalatest.Suite$class.runNestedSuites(Suite.scala:2431)
	at org.scalatest.tools.DiscoverySuite.runNestedSuites(DiscoverySuite.scala:28)
	at org.scalatest.Suite$class.run(Suite.scala:2300)
	at org.scalatest.tools.DiscoverySuite.run(DiscoverySuite.scala:28)
	at org.scalatest.tools.SuiteRunner.run(SuiteRunner.scala:60)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1604)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1601)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.tools.Runner$.doRunRunRunDaDoRunRun(Runner.scala:1601)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:705)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:704)
	at org.scalatest.tools.Runner$.withClassLoaderAndDispatchReporter(Runner.scala:1645)
	at org.scalatest.tools.Runner$.runOptionallyWithPassFailReporter(Runner.scala:703)
	at org.scalatest.tools.Runner$.main(Runner.scala:573)
	at org.scalatest.tools.Runner.main(Runner.scala)
Caused by: java.lang.NoSuchMethodError: com.fasterxml.jackson.core.JsonFactory.requiresPropertyOrdering()Z
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:445)
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:366)
	at org.apache.spark.metrics.sink.MetricsServlet.<init>(MetricsServlet.scala:45)
	... 67 more
- compute overlaps for ten 1000 bp reads, all drawn from the same strand
2015-03-11 23:26:55 ERROR MetricsSystem:96 - Sink class org.apache.spark.metrics.sink.MetricsServlet cannot be instantialized
java.lang.reflect.InvocationTargetException
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:173)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:167)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:226)
	at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:39)
	at scala.collection.mutable.HashMap.foreach(HashMap.scala:98)
	at org.apache.spark.metrics.MetricsSystem.registerSinks(MetricsSystem.scala:167)
	at org.apache.spark.metrics.MetricsSystem.start(MetricsSystem.scala:89)
	at org.apache.spark.SparkContext.<init>(SparkContext.scala:346)
	at org.bdgenomics.utils.misc.SparkFunSuite$class.setupSparkContext(SparkFunSuite.scala:51)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.setupSparkContext(OverlapperSuite.scala:26)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply$mcV$sp(SparkFunSuite.scala:94)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:129)
	at org.scalatest.Suite$class.withFixture(Suite.scala:1974)
	at org.scalatest.FunSuite.withFixture(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:126)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.SuperEngine.runTestImpl(Engine.scala:198)
	at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:135)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.org$scalatest$BeforeAndAfter$$super$runTest(OverlapperSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.runTest(BeforeAndAfter.scala:171)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.runTest(OverlapperSuite.scala:26)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:260)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:249)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.SuperEngine.org$scalatest$SuperEngine$$runTestsInBranch(Engine.scala:249)
	at org.scalatest.SuperEngine.runTestsImpl(Engine.scala:326)
	at org.scalatest.FunSuiteLike$class.runTests(FunSuiteLike.scala:168)
	at org.scalatest.FunSuite.runTests(FunSuite.scala:1182)
	at org.scalatest.Suite$class.run(Suite.scala:2303)
	at org.scalatest.FunSuite.org$scalatest$FunSuiteLike$$super$run(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.SuperEngine.runImpl(Engine.scala:362)
	at org.scalatest.FunSuiteLike$class.run(FunSuiteLike.scala:174)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.org$scalatest$BeforeAndAfter$$super$run(OverlapperSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.run(BeforeAndAfter.scala:208)
	at org.bdgenomics.pacmin.overlapping.OverlapperSuite.run(OverlapperSuite.scala:26)
	at org.scalatest.Suite$class.callExecuteOnSuite$1(Suite.scala:2403)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2433)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2431)
	at scala.collection.immutable.Range.foreach(Range.scala:141)
	at org.scalatest.Suite$class.runNestedSuites(Suite.scala:2431)
	at org.scalatest.tools.DiscoverySuite.runNestedSuites(DiscoverySuite.scala:28)
	at org.scalatest.Suite$class.run(Suite.scala:2300)
	at org.scalatest.tools.DiscoverySuite.run(DiscoverySuite.scala:28)
	at org.scalatest.tools.SuiteRunner.run(SuiteRunner.scala:60)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1604)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1601)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.tools.Runner$.doRunRunRunDaDoRunRun(Runner.scala:1601)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:705)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:704)
	at org.scalatest.tools.Runner$.withClassLoaderAndDispatchReporter(Runner.scala:1645)
	at org.scalatest.tools.Runner$.runOptionallyWithPassFailReporter(Runner.scala:703)
	at org.scalatest.tools.Runner$.main(Runner.scala:573)
	at org.scalatest.tools.Runner.main(Runner.scala)
Caused by: java.lang.NoSuchMethodError: com.fasterxml.jackson.core.JsonFactory.requiresPropertyOrdering()Z
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:445)
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:366)
	at org.apache.spark.metrics.sink.MetricsServlet.<init>(MetricsServlet.scala:45)
	... 67 more
- compute overlaps for ten 1000 bp reads, drawn from different strands
MinHashableReadSuite:
2015-03-11 23:27:09 ERROR MetricsSystem:96 - Sink class org.apache.spark.metrics.sink.MetricsServlet cannot be instantialized
java.lang.reflect.InvocationTargetException
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:173)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:167)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:226)
	at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:39)
	at scala.collection.mutable.HashMap.foreach(HashMap.scala:98)
	at org.apache.spark.metrics.MetricsSystem.registerSinks(MetricsSystem.scala:167)
	at org.apache.spark.metrics.MetricsSystem.start(MetricsSystem.scala:89)
	at org.apache.spark.SparkContext.<init>(SparkContext.scala:346)
	at org.bdgenomics.utils.misc.SparkFunSuite$class.setupSparkContext(SparkFunSuite.scala:51)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.setupSparkContext(MinHashableReadSuite.scala:26)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply$mcV$sp(SparkFunSuite.scala:94)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:129)
	at org.scalatest.Suite$class.withFixture(Suite.scala:1974)
	at org.scalatest.FunSuite.withFixture(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:126)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.SuperEngine.runTestImpl(Engine.scala:198)
	at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:135)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.org$scalatest$BeforeAndAfter$$super$runTest(MinHashableReadSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.runTest(BeforeAndAfter.scala:171)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.runTest(MinHashableReadSuite.scala:26)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:260)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:249)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.SuperEngine.org$scalatest$SuperEngine$$runTestsInBranch(Engine.scala:249)
	at org.scalatest.SuperEngine.runTestsImpl(Engine.scala:326)
	at org.scalatest.FunSuiteLike$class.runTests(FunSuiteLike.scala:168)
	at org.scalatest.FunSuite.runTests(FunSuite.scala:1182)
	at org.scalatest.Suite$class.run(Suite.scala:2303)
	at org.scalatest.FunSuite.org$scalatest$FunSuiteLike$$super$run(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.SuperEngine.runImpl(Engine.scala:362)
	at org.scalatest.FunSuiteLike$class.run(FunSuiteLike.scala:174)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.org$scalatest$BeforeAndAfter$$super$run(MinHashableReadSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.run(BeforeAndAfter.scala:208)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.run(MinHashableReadSuite.scala:26)
	at org.scalatest.Suite$class.callExecuteOnSuite$1(Suite.scala:2403)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2433)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2431)
	at scala.collection.immutable.Range.foreach(Range.scala:141)
	at org.scalatest.Suite$class.runNestedSuites(Suite.scala:2431)
	at org.scalatest.tools.DiscoverySuite.runNestedSuites(DiscoverySuite.scala:28)
	at org.scalatest.Suite$class.run(Suite.scala:2300)
	at org.scalatest.tools.DiscoverySuite.run(DiscoverySuite.scala:28)
	at org.scalatest.tools.SuiteRunner.run(SuiteRunner.scala:60)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1604)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1601)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.tools.Runner$.doRunRunRunDaDoRunRun(Runner.scala:1601)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:705)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:704)
	at org.scalatest.tools.Runner$.withClassLoaderAndDispatchReporter(Runner.scala:1645)
	at org.scalatest.tools.Runner$.runOptionallyWithPassFailReporter(Runner.scala:703)
	at org.scalatest.tools.Runner$.main(Runner.scala:573)
	at org.scalatest.tools.Runner.main(Runner.scala)
Caused by: java.lang.NoSuchMethodError: com.fasterxml.jackson.core.JsonFactory.requiresPropertyOrdering()Z
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:445)
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:366)
	at org.apache.spark.metrics.sink.MetricsServlet.<init>(MetricsServlet.scala:45)
	... 67 more
- compute exact overlap for ten 1000 bp reads
2015-03-11 23:27:11 ERROR MetricsSystem:96 - Sink class org.apache.spark.metrics.sink.MetricsServlet cannot be instantialized
java.lang.reflect.InvocationTargetException
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:173)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:167)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:226)
	at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:39)
	at scala.collection.mutable.HashMap.foreach(HashMap.scala:98)
	at org.apache.spark.metrics.MetricsSystem.registerSinks(MetricsSystem.scala:167)
	at org.apache.spark.metrics.MetricsSystem.start(MetricsSystem.scala:89)
	at org.apache.spark.SparkContext.<init>(SparkContext.scala:346)
	at org.bdgenomics.utils.misc.SparkFunSuite$class.setupSparkContext(SparkFunSuite.scala:51)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.setupSparkContext(MinHashableReadSuite.scala:26)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply$mcV$sp(SparkFunSuite.scala:94)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:129)
	at org.scalatest.Suite$class.withFixture(Suite.scala:1974)
	at org.scalatest.FunSuite.withFixture(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:126)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.SuperEngine.runTestImpl(Engine.scala:198)
	at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:135)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.org$scalatest$BeforeAndAfter$$super$runTest(MinHashableReadSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.runTest(BeforeAndAfter.scala:171)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.runTest(MinHashableReadSuite.scala:26)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:260)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:249)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.SuperEngine.org$scalatest$SuperEngine$$runTestsInBranch(Engine.scala:249)
	at org.scalatest.SuperEngine.runTestsImpl(Engine.scala:326)
	at org.scalatest.FunSuiteLike$class.runTests(FunSuiteLike.scala:168)
	at org.scalatest.FunSuite.runTests(FunSuite.scala:1182)
	at org.scalatest.Suite$class.run(Suite.scala:2303)
	at org.scalatest.FunSuite.org$scalatest$FunSuiteLike$$super$run(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.SuperEngine.runImpl(Engine.scala:362)
	at org.scalatest.FunSuiteLike$class.run(FunSuiteLike.scala:174)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.org$scalatest$BeforeAndAfter$$super$run(MinHashableReadSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.run(BeforeAndAfter.scala:208)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.run(MinHashableReadSuite.scala:26)
	at org.scalatest.Suite$class.callExecuteOnSuite$1(Suite.scala:2403)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2433)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2431)
	at scala.collection.immutable.Range.foreach(Range.scala:141)
	at org.scalatest.Suite$class.runNestedSuites(Suite.scala:2431)
	at org.scalatest.tools.DiscoverySuite.runNestedSuites(DiscoverySuite.scala:28)
	at org.scalatest.Suite$class.run(Suite.scala:2300)
	at org.scalatest.tools.DiscoverySuite.run(DiscoverySuite.scala:28)
	at org.scalatest.tools.SuiteRunner.run(SuiteRunner.scala:60)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1604)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1601)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.tools.Runner$.doRunRunRunDaDoRunRun(Runner.scala:1601)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:705)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:704)
	at org.scalatest.tools.Runner$.withClassLoaderAndDispatchReporter(Runner.scala:1645)
	at org.scalatest.tools.Runner$.runOptionallyWithPassFailReporter(Runner.scala:703)
	at org.scalatest.tools.Runner$.main(Runner.scala:573)
	at org.scalatest.tools.Runner.main(Runner.scala)
Caused by: java.lang.NoSuchMethodError: com.fasterxml.jackson.core.JsonFactory.requiresPropertyOrdering()Z
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:445)
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:366)
	at org.apache.spark.metrics.sink.MetricsServlet.<init>(MetricsServlet.scala:45)
	... 67 more
- compute approximate overlap for ten 1000 bp reads across different band sizes
2015-03-11 23:27:13 ERROR MetricsSystem:96 - Sink class org.apache.spark.metrics.sink.MetricsServlet cannot be instantialized
java.lang.reflect.InvocationTargetException
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:173)
	at org.apache.spark.metrics.MetricsSystem$$anonfun$registerSinks$1.apply(MetricsSystem.scala:167)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:98)
	at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:226)
	at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:39)
	at scala.collection.mutable.HashMap.foreach(HashMap.scala:98)
	at org.apache.spark.metrics.MetricsSystem.registerSinks(MetricsSystem.scala:167)
	at org.apache.spark.metrics.MetricsSystem.start(MetricsSystem.scala:89)
	at org.apache.spark.SparkContext.<init>(SparkContext.scala:346)
	at org.bdgenomics.utils.misc.SparkFunSuite$class.setupSparkContext(SparkFunSuite.scala:51)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.setupSparkContext(MinHashableReadSuite.scala:26)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply$mcV$sp(SparkFunSuite.scala:94)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.bdgenomics.utils.misc.SparkFunSuite$$anonfun$sparkTest$1.apply(SparkFunSuite.scala:93)
	at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:129)
	at org.scalatest.Suite$class.withFixture(Suite.scala:1974)
	at org.scalatest.FunSuite.withFixture(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$class.invokeWithFixture$1(FunSuiteLike.scala:126)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.FunSuiteLike$$anonfun$runTest$1.apply(FunSuiteLike.scala:135)
	at org.scalatest.SuperEngine.runTestImpl(Engine.scala:198)
	at org.scalatest.FunSuiteLike$class.runTest(FunSuiteLike.scala:135)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.org$scalatest$BeforeAndAfter$$super$runTest(MinHashableReadSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.runTest(BeforeAndAfter.scala:171)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.runTest(MinHashableReadSuite.scala:26)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.FunSuiteLike$$anonfun$runTests$1.apply(FunSuiteLike.scala:168)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:260)
	at org.scalatest.SuperEngine$$anonfun$org$scalatest$SuperEngine$$runTestsInBranch$1.apply(Engine.scala:249)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.SuperEngine.org$scalatest$SuperEngine$$runTestsInBranch(Engine.scala:249)
	at org.scalatest.SuperEngine.runTestsImpl(Engine.scala:326)
	at org.scalatest.FunSuiteLike$class.runTests(FunSuiteLike.scala:168)
	at org.scalatest.FunSuite.runTests(FunSuite.scala:1182)
	at org.scalatest.Suite$class.run(Suite.scala:2303)
	at org.scalatest.FunSuite.org$scalatest$FunSuiteLike$$super$run(FunSuite.scala:1182)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.FunSuiteLike$$anonfun$run$1.apply(FunSuiteLike.scala:174)
	at org.scalatest.SuperEngine.runImpl(Engine.scala:362)
	at org.scalatest.FunSuiteLike$class.run(FunSuiteLike.scala:174)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.org$scalatest$BeforeAndAfter$$super$run(MinHashableReadSuite.scala:26)
	at org.scalatest.BeforeAndAfter$class.run(BeforeAndAfter.scala:208)
	at org.bdgenomics.pacmin.overlapping.MinHashableReadSuite.run(MinHashableReadSuite.scala:26)
	at org.scalatest.Suite$class.callExecuteOnSuite$1(Suite.scala:2403)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2433)
	at org.scalatest.Suite$$anonfun$runNestedSuites$1.apply(Suite.scala:2431)
	at scala.collection.immutable.Range.foreach(Range.scala:141)
	at org.scalatest.Suite$class.runNestedSuites(Suite.scala:2431)
	at org.scalatest.tools.DiscoverySuite.runNestedSuites(DiscoverySuite.scala:28)
	at org.scalatest.Suite$class.run(Suite.scala:2300)
	at org.scalatest.tools.DiscoverySuite.run(DiscoverySuite.scala:28)
	at org.scalatest.tools.SuiteRunner.run(SuiteRunner.scala:60)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1604)
	at org.scalatest.tools.Runner$$anonfun$doRunRunRunDaDoRunRun$3.apply(Runner.scala:1601)
	at scala.collection.immutable.List.foreach(List.scala:318)
	at org.scalatest.tools.Runner$.doRunRunRunDaDoRunRun(Runner.scala:1601)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:705)
	at org.scalatest.tools.Runner$$anonfun$runOptionallyWithPassFailReporter$2.apply(Runner.scala:704)
	at org.scalatest.tools.Runner$.withClassLoaderAndDispatchReporter(Runner.scala:1645)
	at org.scalatest.tools.Runner$.runOptionallyWithPassFailReporter(Runner.scala:703)
	at org.scalatest.tools.Runner$.main(Runner.scala:573)
	at org.scalatest.tools.Runner.main(Runner.scala)
Caused by: java.lang.NoSuchMethodError: com.fasterxml.jackson.core.JsonFactory.requiresPropertyOrdering()Z
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:445)
	at com.fasterxml.jackson.databind.ObjectMapper.<init>(ObjectMapper.java:366)
	at org.apache.spark.metrics.sink.MetricsServlet.<init>(MetricsServlet.scala:45)
	... 67 more
- should throw exception if we pick an illegal band count
Run completed in 38 seconds, 911 milliseconds.
Total number of tests run: 8
Suites: completed 3, aborted 0
Tests: succeeded 8, failed 0, ignored 0, pending 0
All tests passed.
[INFO] 
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ pacmin-core ---
[INFO] Building jar: /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-core/target/pacmin-core-0.0.1-SNAPSHOT.jar
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building pacmin-cli: Command line interface for PacBio assembler 0.0.1-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ pacmin-cli ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-versions) @ pacmin-cli ---
[INFO] 
[INFO] --- maven-enforcer-plugin:1.0:enforce (enforce-maven) @ pacmin-cli ---
[INFO] 
[INFO] --- scalariform-maven-plugin:0.1.4:format (default-cli) @ pacmin-cli ---
[INFO] Modified 0 of 1 .scala files
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ pacmin-cli ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/src/main/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.1.5:compile (scala-compile-first) @ pacmin-cli ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.3
[WARNING]  org.bdgenomics.bdg-utils:bdg-utils-misc:0.1.3-SNAPSHOT requires scala version: 2.10.4
[WARNING] Multiple versions of scala libraries detected!
[INFO] Using zinc server for incremental compilation
[info] Compiling 1 Scala source to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/scala-2.10.3/classes...
[info] Compile success at Mar 11, 2015 11:27:16 PM [1.154s]
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ pacmin-cli ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ pacmin-cli ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/src/test/resources
[INFO] 
[INFO] --- scala-maven-plugin:3.1.5:testCompile (scala-test-compile-first) @ pacmin-cli ---
[WARNING]  Expected all dependencies to require Scala version: 2.10.3
[WARNING]  org.bdgenomics.bdg-utils:bdg-utils-misc:0.1.3-SNAPSHOT requires scala version: 2.10.4
[WARNING] Multiple versions of scala libraries detected!
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ pacmin-cli ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-surefire-plugin:2.7:test (default-test) @ pacmin-cli ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- scalatest-maven-plugin:1.0-RC2:test (test) @ pacmin-cli ---
Run starting. Expected test count is: 0
DiscoverySuite:
Run completed in 112 milliseconds.
Total number of tests run: 0
Suites: completed 1, aborted 0
Tests: succeeded 0, failed 0, ignored 0, pending 0
All tests passed.
[INFO] 
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ pacmin-cli ---
[INFO] Building jar: /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/pacmin-cli-0.0.1-SNAPSHOT.jar
[INFO] 
[INFO] --- appassembler-maven-plugin:1.8:assemble (default) @ pacmin-cli ---
[INFO] Installing artifact /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-core/target/pacmin-core-0.0.1-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/pacmin/pacmin-core/0.0.1-SNAPSHOT/pacmin-core-0.0.1-SNAPSHOT.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/spark/spark-graphx_2.10/1.2.0/spark-graphx_2.10-1.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/spark/spark-graphx_2.10/1.2.0/spark-graphx_2.10-1.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/jblas/jblas/1.2.3/jblas-1.2.3.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/jblas/jblas/1.2.3/jblas-1.2.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/bdg-utils/bdg-utils-minhash/0.1.3-SNAPSHOT/bdg-utils-minhash-0.1.3-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/bdg-utils/bdg-utils-minhash/0.1.3-SNAPSHOT/bdg-utils-minhash-0.1.3-SNAPSHOT.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/bdg-utils/bdg-utils-misc/0.1.3-SNAPSHOT/bdg-utils-misc-0.1.3-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/bdg-utils/bdg-utils-misc/0.1.3-SNAPSHOT/bdg-utils-misc-0.1.3-20150311.085634-37.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/avocado/avocado-core/0.0.3-SNAPSHOT/avocado-core-0.0.3-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/avocado/avocado-core/0.0.3-SNAPSHOT/avocado-core-0.0.3-20150311.113740-1207.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-client/2.2.0/hadoop-client-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-client/2.2.0/hadoop-client-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-common/2.2.0/hadoop-common-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-common/2.2.0/hadoop-common-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-cli/commons-cli/1.2/commons-cli-1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-cli/commons-cli/1.2/commons-cli-1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/commons/commons-math/2.1/commons-math-2.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/commons/commons-math/2.1/commons-math-2.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/xmlenc/xmlenc/0.52/xmlenc-0.52.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/xmlenc/xmlenc/0.52/xmlenc-0.52.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-httpclient/commons-httpclient/3.1/commons-httpclient-3.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-codec/commons-codec/1.4/commons-codec-1.4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-codec/commons-codec/1.4/commons-codec-1.4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-logging/commons-logging/1.1.1/commons-logging-1.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-lang/commons-lang/2.5/commons-lang-2.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-lang/commons-lang/2.5/commons-lang-2.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-configuration/commons-configuration/1.6/commons-configuration-1.6.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-collections/commons-collections/3.2.1/commons-collections-3.2.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-digester/commons-digester/1.8/commons-digester-1.8.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-digester/commons-digester/1.8/commons-digester-1.8.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-beanutils/commons-beanutils/1.7.0/commons-beanutils-1.7.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-beanutils/commons-beanutils-core/1.8.0/commons-beanutils-core-1.8.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/google/protobuf/protobuf-java/2.5.0/protobuf-java-2.5.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-auth/2.2.0/hadoop-auth-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-auth/2.2.0/hadoop-auth-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/zookeeper/zookeeper/3.4.5/zookeeper-3.4.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/commons/commons-compress/1.4.1/commons-compress-1.4.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/tukaani/xz/1.0/xz-1.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/tukaani/xz/1.0/xz-1.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-hdfs/2.2.0/hadoop-hdfs-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-hdfs/2.2.0/hadoop-hdfs-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/mortbay/jetty/jetty-util/6.1.26/jetty-util-6.1.26.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-mapreduce-client-app/2.2.0/hadoop-mapreduce-client-app-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-mapreduce-client-app/2.2.0/hadoop-mapreduce-client-app-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-mapreduce-client-common/2.2.0/hadoop-mapreduce-client-common-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-mapreduce-client-common/2.2.0/hadoop-mapreduce-client-common-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-yarn-client/2.2.0/hadoop-yarn-client-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-yarn-client/2.2.0/hadoop-yarn-client-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/inject/guice/3.0/guice-3.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/google/inject/guice/3.0/guice-3.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/javax/inject/javax.inject/1/javax.inject-1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/javax/inject/javax.inject/1/javax.inject-1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/aopalliance/aopalliance/1.0/aopalliance-1.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/aopalliance/aopalliance/1.0/aopalliance-1.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-test-framework/jersey-test-framework-grizzly2/1.9/jersey-test-framework-grizzly2-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-test-framework/jersey-test-framework-grizzly2/1.9/jersey-test-framework-grizzly2-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-test-framework/jersey-test-framework-core/1.9/jersey-test-framework-core-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-test-framework/jersey-test-framework-core/1.9/jersey-test-framework-core-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-client/1.9/jersey-client-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-client/1.9/jersey-client-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-grizzly2/1.9/jersey-grizzly2-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-grizzly2/1.9/jersey-grizzly2-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/grizzly/grizzly-http/2.1.2/grizzly-http-2.1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/grizzly/grizzly-http/2.1.2/grizzly-http-2.1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/grizzly/grizzly-framework/2.1.2/grizzly-framework-2.1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/grizzly/grizzly-framework/2.1.2/grizzly-framework-2.1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/gmbal/gmbal-api-only/3.0.0-b023/gmbal-api-only-3.0.0-b023.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/gmbal/gmbal-api-only/3.0.0-b023/gmbal-api-only-3.0.0-b023.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/external/management-api/3.0.0-b012/management-api-3.0.0-b012.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/external/management-api/3.0.0-b012/management-api-3.0.0-b012.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/grizzly/grizzly-http-server/2.1.2/grizzly-http-server-2.1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/grizzly/grizzly-http-server/2.1.2/grizzly-http-server-2.1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/grizzly/grizzly-rcm/2.1.2/grizzly-rcm-2.1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/grizzly/grizzly-rcm/2.1.2/grizzly-rcm-2.1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/grizzly/grizzly-http-servlet/2.1.2/grizzly-http-servlet-2.1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/grizzly/grizzly-http-servlet/2.1.2/grizzly-http-servlet-2.1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/glassfish/javax.servlet/3.1/javax.servlet-3.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/glassfish/javax.servlet/3.1/javax.servlet-3.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-server/1.9/jersey-server-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-core/1.9/jersey-core-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/jersey-json/1.9/jersey-json-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/codehaus/jettison/jettison/1.1/jettison-1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/stax/stax-api/1.0.1/stax-api-1.0.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/stax/stax-api/1.0.1/stax-api-1.0.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/xml/bind/jaxb-impl/2.2.3-1/jaxb-impl-2.2.3-1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/javax/xml/bind/jaxb-api/2.2.2/jaxb-api-2.2.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/javax/activation/activation/1.1/activation-1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/javax/activation/activation/1.1/activation-1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/sun/jersey/contribs/jersey-guice/1.9/jersey-guice-1.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/sun/jersey/contribs/jersey-guice/1.9/jersey-guice-1.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-yarn-server-common/2.2.0/hadoop-yarn-server-common-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-yarn-server-common/2.2.0/hadoop-yarn-server-common-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-mapreduce-client-shuffle/2.2.0/hadoop-mapreduce-client-shuffle-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-mapreduce-client-shuffle/2.2.0/hadoop-mapreduce-client-shuffle-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-yarn-api/2.2.0/hadoop-yarn-api-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-yarn-api/2.2.0/hadoop-yarn-api-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-mapreduce-client-core/2.2.0/hadoop-mapreduce-client-core-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-mapreduce-client-core/2.2.0/hadoop-mapreduce-client-core-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-yarn-common/2.2.0/hadoop-yarn-common-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-yarn-common/2.2.0/hadoop-yarn-common-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-mapreduce-client-jobclient/2.2.0/hadoop-mapreduce-client-jobclient-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-mapreduce-client-jobclient/2.2.0/hadoop-mapreduce-client-jobclient-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/hadoop/hadoop-annotations/2.2.0/hadoop-annotations-2.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/hadoop/hadoop-annotations/2.2.0/hadoop-annotations-2.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/adam/adam-core/0.16.1-SNAPSHOT/adam-core-0.16.1-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/adam/adam-core/0.16.1-SNAPSHOT/adam-core-0.16.1-SNAPSHOT.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/bdg-utils/bdg-utils-metrics/0.1.1/bdg-utils-metrics-0.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/bdg-utils/bdg-utils-metrics/0.1.1/bdg-utils-metrics-0.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/bdg-utils/bdg-utils-parquet/0.1.1/bdg-utils-parquet-0.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/bdg-utils/bdg-utils-parquet/0.1.1/bdg-utils-parquet-0.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/amazonaws/aws-java-sdk/1.7.5/aws-java-sdk-1.7.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/amazonaws/aws-java-sdk/1.7.5/aws-java-sdk-1.7.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.1.1/jackson-core-2.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/fasterxml/jackson/core/jackson-core/2.1.1/jackson-core-2.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.1.1/jackson-annotations-2.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/fasterxml/jackson/core/jackson-annotations/2.1.1/jackson-annotations-2.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/esotericsoftware/kryo/kryo/2.21/kryo-2.21.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/esotericsoftware/kryo/kryo/2.21/kryo-2.21.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/esotericsoftware/reflectasm/reflectasm/1.07/reflectasm-1.07-shaded.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/esotericsoftware/reflectasm/reflectasm/1.07/reflectasm-1.07-shaded.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/ow2/asm/asm/4.0/asm-4.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/ow2/asm/asm/4.0/asm-4.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/esotericsoftware/minlog/minlog/1.2/minlog-1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/objenesis/objenesis/1.2/objenesis-1.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/objenesis/objenesis/1.2/objenesis-1.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scoverage/scalac-scoverage-plugin_2.10/0.99.2/scalac-scoverage-plugin_2.10-0.99.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scoverage/scalac-scoverage-plugin_2.10/0.99.2/scalac-scoverage-plugin_2.10-0.99.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/bdg-formats/bdg-formats/0.4.0/bdg-formats-0.4.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/bdg-formats/bdg-formats/0.4.0/bdg-formats-0.4.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-io/commons-io/1.3.2/commons-io-1.3.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-io/commons-io/1.3.2/commons-io-1.3.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scala-lang/scala-library/2.10.4/scala-library-2.10.4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scala-lang/scala-library/2.10.4/scala-library-2.10.4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/it/unimi/dsi/fastutil/6.4.4/fastutil-6.4.4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/it/unimi/dsi/fastutil/6.4.4/fastutil-6.4.4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/avro/avro/1.7.6/avro-1.7.6.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/avro/avro/1.7.6/avro-1.7.6.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/codehaus/jackson/jackson-core-asl/1.9.13/jackson-core-asl-1.9.13.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/codehaus/jackson/jackson-core-asl/1.9.13/jackson-core-asl-1.9.13.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/codehaus/jackson/jackson-mapper-asl/1.9.13/jackson-mapper-asl-1.9.13.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/codehaus/jackson/jackson-mapper-asl/1.9.13/jackson-mapper-asl-1.9.13.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/thoughtworks/paranamer/paranamer/2.3/paranamer-2.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/slf4j/slf4j-log4j12/1.7.5/slf4j-log4j12-1.7.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/slf4j/slf4j-log4j12/1.7.5/slf4j-log4j12-1.7.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-avro/1.6.0rc4/parquet-avro-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-avro/1.6.0rc4/parquet-avro-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-column/1.6.0rc4/parquet-column-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-column/1.6.0rc4/parquet-column-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-common/1.6.0rc4/parquet-common-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-common/1.6.0rc4/parquet-common-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-encoding/1.6.0rc4/parquet-encoding-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-encoding/1.6.0rc4/parquet-encoding-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-generator/1.6.0rc4/parquet-generator-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-generator/1.6.0rc4/parquet-generator-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-hadoop/1.6.0rc4/parquet-hadoop-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-hadoop/1.6.0rc4/parquet-hadoop-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-jackson/1.6.0rc4/parquet-jackson-1.6.0rc4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-jackson/1.6.0rc4/parquet-jackson-1.6.0rc4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/parquet-format/2.2.0-rc1/parquet-format-2.2.0-rc1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/parquet-format/2.2.0-rc1/parquet-format-2.2.0-rc1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/seqdoop/hadoop-bam/7.0.0/hadoop-bam-7.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/seqdoop/hadoop-bam/7.0.0/hadoop-bam-7.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/seqdoop/cofoja/1.1-r150/cofoja-1.1-r150.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/seqdoop/cofoja/1.1-r150/cofoja-1.1-r150.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/seqdoop/htsjdk/1.118/htsjdk-1.118.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/seqdoop/htsjdk/1.118/htsjdk-1.118.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/ant/ant/1.8.2/ant-1.8.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/ant/ant/1.8.2/ant-1.8.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/ant/ant-launcher/1.8.2/ant-launcher-1.8.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/ant/ant-launcher/1.8.2/ant-launcher-1.8.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/bcel/bcel/5.2/bcel-5.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/bcel/bcel/5.2/bcel-5.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/jakarta-regexp/jakarta-regexp/1.4/jakarta-regexp-1.4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/jakarta-regexp/jakarta-regexp/1.4/jakarta-regexp-1.4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/commons/commons-jexl/2.1.1/commons-jexl-2.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/commons/commons-jexl/2.1.1/commons-jexl-2.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/testng/testng/6.8.8/testng-6.8.8.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/testng/testng/6.8.8/testng-6.8.8.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/beanshell/bsh/2.0b4/bsh-2.0b4.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/beanshell/bsh/2.0b4/bsh-2.0b4.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/beust/jcommander/1.27/jcommander-1.27.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/beust/jcommander/1.27/jcommander-1.27.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/httpcomponents/httpclient/4.3.2/httpclient-4.3.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/httpcomponents/httpclient/4.3.2/httpclient-4.3.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/httpcomponents/httpcore/4.3.1/httpcore-4.3.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/httpcomponents/httpcore/4.3.1/httpcore-4.3.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/netflix/servo/servo-core/0.5.5/servo-core-0.5.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/netflix/servo/servo-core/0.5.5/servo-core-0.5.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/code/findbugs/annotations/2.0.0/annotations-2.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/google/code/findbugs/annotations/2.0.0/annotations-2.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/guava/guava/14.0.1/guava-14.0.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/google/guava/guava/14.0.1/guava-14.0.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/adam/adam-cli/0.16.1-SNAPSHOT/adam-cli-0.16.1-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/adam/adam-cli/0.16.1-SNAPSHOT/adam-cli-0.16.1-SNAPSHOT.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/bdgenomics/adam/adam-apis/0.16.1-SNAPSHOT/adam-apis-0.16.1-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/adam/adam-apis/0.16.1-SNAPSHOT/adam-apis-0.16.1-20150311.113325-142.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/args4j/args4j/2.0.23/args4j-2.0.23.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/args4j/args4j/2.0.23/args4j-2.0.23.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/fusesource/scalate/scalate-core_2.10/1.6.1/scalate-core_2.10-1.6.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/fusesource/scalate/scalate-core_2.10/1.6.1/scalate-core_2.10-1.6.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/fusesource/scalate/scalate-util_2.10/1.6.1/scalate-util_2.10-1.6.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/fusesource/scalate/scalate-util_2.10/1.6.1/scalate-util_2.10-1.6.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scala-lang/scala-compiler/2.10.0/scala-compiler-2.10.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scala-lang/scala-compiler/2.10.0/scala-compiler-2.10.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scala-lang/scala-reflect/2.10.0/scala-reflect-2.10.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scala-lang/scala-reflect/2.10.0/scala-reflect-2.10.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scalatra/scalatra-json_2.10/2.3.0/scalatra-json_2.10-2.3.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scalatra/scalatra-json_2.10/2.3.0/scalatra-json_2.10-2.3.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/json4s/json4s-core_2.10/3.2.10/json4s-core_2.10-3.2.10.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/json4s/json4s-core_2.10/3.2.10/json4s-core_2.10-3.2.10.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/json4s/json4s-ast_2.10/3.2.10/json4s-ast_2.10-3.2.10.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/json4s/json4s-ast_2.10/3.2.10/json4s-ast_2.10-3.2.10.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scala-lang/scalap/2.10.0/scalap-2.10.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scala-lang/scalap/2.10.0/scalap-2.10.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scalatra/scalatra_2.10/2.3.0/scalatra_2.10-2.3.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scalatra/scalatra_2.10/2.3.0/scalatra_2.10-2.3.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scalatra/scalatra-common_2.10/2.3.0/scalatra-common_2.10-2.3.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scalatra/scalatra-common_2.10/2.3.0/scalatra-common_2.10-2.3.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/clapper/grizzled-slf4j_2.10/1.0.2/grizzled-slf4j_2.10-1.0.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/clapper/grizzled-slf4j_2.10/1.0.2/grizzled-slf4j_2.10-1.0.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/scalatra/rl/rl_2.10/0.4.10/rl_2.10-0.4.10.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/scalatra/rl/rl_2.10/0.4.10/rl_2.10-0.4.10.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/googlecode/juniversalchardet/juniversalchardet/1.0.3/juniversalchardet-1.0.3.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/googlecode/juniversalchardet/juniversalchardet/1.0.3/juniversalchardet-1.0.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/eu/medsea/mimeutil/mime-util/2.1.3/mime-util-2.1.3.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/eu/medsea/mimeutil/mime-util/2.1.3/mime-util-2.1.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/joda-time/joda-time/2.3/joda-time-2.3.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/joda-time/joda-time/2.3/joda-time-2.3.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/joda/joda-convert/1.6/joda-convert-1.6.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/joda/joda-convert/1.6/joda-convert-1.6.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/spark/spark-core_2.10/1.2.0/spark-core_2.10-1.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/spark/spark-core_2.10/1.2.0/spark-core_2.10-1.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/chill_2.10/0.5.0/chill_2.10-0.5.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/chill_2.10/0.5.0/chill_2.10-0.5.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/twitter/chill-java/0.5.0/chill-java-0.5.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/twitter/chill-java/0.5.0/chill-java-0.5.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/spark/spark-network-common_2.10/1.2.0/spark-network-common_2.10-1.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/spark/spark-network-common_2.10/1.2.0/spark-network-common_2.10-1.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/spark/spark-network-shuffle_2.10/1.2.0/spark-network-shuffle_2.10-1.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/spark/spark-network-shuffle_2.10/1.2.0/spark-network-shuffle_2.10-1.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/net/java/dev/jets3t/jets3t/0.7.1/jets3t-0.7.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/net/java/dev/jets3t/jets3t/0.7.1/jets3t-0.7.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/curator/curator-recipes/2.4.0/curator-recipes-2.4.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/curator/curator-recipes/2.4.0/curator-recipes-2.4.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/curator/curator-framework/2.4.0/curator-framework-2.4.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/curator/curator-framework/2.4.0/curator-framework-2.4.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/curator/curator-client/2.4.0/curator-client-2.4.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/curator/curator-client/2.4.0/curator-client-2.4.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-plus/8.1.14.v20131031/jetty-plus-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-plus/8.1.14.v20131031/jetty-plus-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/orbit/javax.transaction/1.1.1.v201105210645/javax.transaction-1.1.1.v201105210645.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/orbit/javax.transaction/1.1.1.v201105210645/javax.transaction-1.1.1.v201105210645.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-webapp/8.1.14.v20131031/jetty-webapp-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-webapp/8.1.14.v20131031/jetty-webapp-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-xml/8.1.14.v20131031/jetty-xml-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-xml/8.1.14.v20131031/jetty-xml-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-servlet/8.1.14.v20131031/jetty-servlet-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-servlet/8.1.14.v20131031/jetty-servlet-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-jndi/8.1.14.v20131031/jetty-jndi-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-jndi/8.1.14.v20131031/jetty-jndi-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/orbit/javax.mail.glassfish/1.4.1.v201005082020/javax.mail.glassfish-1.4.1.v201005082020.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/orbit/javax.mail.glassfish/1.4.1.v201005082020/javax.mail.glassfish-1.4.1.v201005082020.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/orbit/javax.activation/1.1.0.v201105071233/javax.activation-1.1.0.v201105071233.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/orbit/javax.activation/1.1.0.v201105071233/javax.activation-1.1.0.v201105071233.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-security/8.1.14.v20131031/jetty-security-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-security/8.1.14.v20131031/jetty-security-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-util/8.1.14.v20131031/jetty-util-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-util/8.1.14.v20131031/jetty-util-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-server/8.1.14.v20131031/jetty-server-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-server/8.1.14.v20131031/jetty-server-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/orbit/javax.servlet/3.0.0.v201112011016/javax.servlet-3.0.0.v201112011016.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/orbit/javax.servlet/3.0.0.v201112011016/javax.servlet-3.0.0.v201112011016.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-continuation/8.1.14.v20131031/jetty-continuation-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-continuation/8.1.14.v20131031/jetty-continuation-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-http/8.1.14.v20131031/jetty-http-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-http/8.1.14.v20131031/jetty-http-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/eclipse/jetty/jetty-io/8.1.14.v20131031/jetty-io-8.1.14.v20131031.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/eclipse/jetty/jetty-io/8.1.14.v20131031/jetty-io-8.1.14.v20131031.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/commons/commons-lang3/3.3.2/commons-lang3-3.3.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/commons/commons-lang3/3.3.2/commons-lang3-3.3.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/commons/commons-math3/3.1.1/commons-math3-3.1.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/commons/commons-math3/3.1.1/commons-math3-3.1.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/google/code/findbugs/jsr305/1.3.9/jsr305-1.3.9.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/slf4j/slf4j-api/1.7.5/slf4j-api-1.7.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/slf4j/jul-to-slf4j/1.7.5/jul-to-slf4j-1.7.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/slf4j/jul-to-slf4j/1.7.5/jul-to-slf4j-1.7.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/slf4j/jcl-over-slf4j/1.7.5/jcl-over-slf4j-1.7.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/slf4j/jcl-over-slf4j/1.7.5/jcl-over-slf4j-1.7.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/log4j/log4j/1.2.17/log4j-1.2.17.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/ning/compress-lzf/1.0.0/compress-lzf-1.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/ning/compress-lzf/1.0.0/compress-lzf-1.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/xerial/snappy/snappy-java/1.1.1.6/snappy-java-1.1.1.6.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/xerial/snappy/snappy-java/1.1.1.6/snappy-java-1.1.1.6.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/net/jpountz/lz4/lz4/1.2.0/lz4-1.2.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/net/jpountz/lz4/lz4/1.2.0/lz4-1.2.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/roaringbitmap/RoaringBitmap/0.4.5/RoaringBitmap-0.4.5.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/roaringbitmap/RoaringBitmap/0.4.5/RoaringBitmap-0.4.5.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/commons-net/commons-net/2.2/commons-net-2.2.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/commons-net/commons-net/2.2/commons-net-2.2.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/spark-project/akka/akka-remote_2.10/2.3.4-spark/akka-remote_2.10-2.3.4-spark.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/spark-project/akka/akka-remote_2.10/2.3.4-spark/akka-remote_2.10-2.3.4-spark.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/spark-project/akka/akka-actor_2.10/2.3.4-spark/akka-actor_2.10-2.3.4-spark.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/spark-project/akka/akka-actor_2.10/2.3.4-spark/akka-actor_2.10-2.3.4-spark.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/typesafe/config/1.2.1/config-1.2.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/typesafe/config/1.2.1/config-1.2.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/io/netty/netty/3.8.0.Final/netty-3.8.0.Final.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/io/netty/netty/3.8.0.Final/netty-3.8.0.Final.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/spark-project/protobuf/protobuf-java/2.5.0-spark/protobuf-java-2.5.0-spark.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/spark-project/protobuf/protobuf-java/2.5.0-spark/protobuf-java-2.5.0-spark.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/uncommons/maths/uncommons-maths/1.2.2a/uncommons-maths-1.2.2a.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/uncommons/maths/uncommons-maths/1.2.2a/uncommons-maths-1.2.2a.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/spark-project/akka/akka-slf4j_2.10/2.3.4-spark/akka-slf4j_2.10-2.3.4-spark.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/spark-project/akka/akka-slf4j_2.10/2.3.4-spark/akka-slf4j_2.10-2.3.4-spark.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/json4s/json4s-jackson_2.10/3.2.10/json4s-jackson_2.10-3.2.10.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/json4s/json4s-jackson_2.10/3.2.10/json4s-jackson_2.10-3.2.10.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.3.1/jackson-databind-2.3.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/fasterxml/jackson/core/jackson-databind/2.3.1/jackson-databind-2.3.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/apache/mesos/mesos/0.18.1/mesos-0.18.1-shaded-protobuf.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/apache/mesos/mesos/0.18.1/mesos-0.18.1-shaded-protobuf.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/io/netty/netty-all/4.0.23.Final/netty-all-4.0.23.Final.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/io/netty/netty-all/4.0.23.Final/netty-all-4.0.23.Final.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/clearspring/analytics/stream/2.7.0/stream-2.7.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/clearspring/analytics/stream/2.7.0/stream-2.7.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/codahale/metrics/metrics-core/3.0.0/metrics-core-3.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/codahale/metrics/metrics-core/3.0.0/metrics-core-3.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/codahale/metrics/metrics-jvm/3.0.0/metrics-jvm-3.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/codahale/metrics/metrics-jvm/3.0.0/metrics-jvm-3.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/codahale/metrics/metrics-json/3.0.0/metrics-json-3.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/codahale/metrics/metrics-json/3.0.0/metrics-json-3.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/com/codahale/metrics/metrics-graphite/3.0.0/metrics-graphite-3.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/com/codahale/metrics/metrics-graphite/3.0.0/metrics-graphite-3.0.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/tachyonproject/tachyon-client/0.5.0/tachyon-client-0.5.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/tachyonproject/tachyon-client/0.5.0/tachyon-client-0.5.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/tachyonproject/tachyon/0.5.0/tachyon-0.5.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/tachyonproject/tachyon/0.5.0/tachyon-0.5.0.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/spark-project/pyrolite/2.0.1/pyrolite-2.0.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/spark-project/pyrolite/2.0.1/pyrolite-2.0.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/net/sf/py4j/py4j/0.8.2.1/py4j-0.8.2.1.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/net/sf/py4j/py4j/0.8.2.1/py4j-0.8.2.1.jar
[INFO] Installing artifact /home/jenkins/.m2/repository/org/spark-project/spark/unused/1.0.0/unused-1.0.0.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/spark-project/spark/unused/1.0.0/unused-1.0.0.jar
[INFO] Installing artifact /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/pacmin-cli-0.0.1-SNAPSHOT.jar to /home/jenkins/workspace/PacMin-prb/hadoop.version/2.2.0/label/centos/pacmin-cli/target/appassembler/repo/org/bdgenomics/pacmin/pacmin-cli/0.0.1-SNAPSHOT/pacmin-cli-0.0.1-SNAPSHOT.jar
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] 
[INFO] PacMin ............................................ SUCCESS [2.282s]
[INFO] pacmin-core: Core assembler algorithms ............ SUCCESS [54.329s]
[INFO] pacmin-cli: Command line interface for PacBio assembler  SUCCESS [2.771s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 59.544s
[INFO] Finished at: Wed Mar 11 23:27:17 PDT 2015
[INFO] Final Memory: 36M/1963M
[INFO] ------------------------------------------------------------------------
Recording test results
Finished: SUCCESS